RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 FYCO1Q9BQS8 1478 aa14.74□□□□□ -0.05
AC004828.1-201ENST00000555303 POGZQ7Z3K3 1410 aa14.74□□□□□ -0.05
AC004828.1-201ENST00000555303 ATP1B4Q9UN42 357 aaPredicted RBP14.72□□□□□ -0.05
AC004828.1-201ENST00000555303 MADDQ8WXG6 1647 aa14.72□□□□□ -0.05
AC004828.1-201ENST00000555303 PREX2Q70Z35 1606 aa14.71□□□□□ -0.05
AC004828.1-201ENST00000555303 PTPRMP28827 1452 aa14.7□□□□□ -0.06
AC004828.1-201ENST00000555303 SCAPERQ9BY12 1400 aa14.7□□□□□ -0.06
AC004828.1-201ENST00000555303 ARHGAP5Q13017 1502 aa14.7□□□□□ -0.06
AC004828.1-201ENST00000555303 CDC42BPBQ9Y5S2 1711 aa14.69□□□□□ -0.06
AC004828.1-201ENST00000555303 EFCAB2Q5VUJ9 269 aa14.69□□□□□ -0.06
AC004828.1-201ENST00000555303 ZNF518AQ6AHZ1 1483 aa14.69□□□□□ -0.06
AC004828.1-201ENST00000555303 KDM5CP41229 1560 aa14.68□□□□□ -0.06
AC004828.1-201ENST00000555303 RIMS1Q86UR5 1692 aaKnown RBP14.67□□□□□ -0.06
AC004828.1-201ENST00000555303 ARID4BQ4LE39 1312 aaPredicted RBP14.66□□□□□ -0.06
AC004828.1-201ENST00000555303 YEATS2Q9ULM3 1422 aa14.66□□□□□ -0.06
AC004828.1-201ENST00000555303 SIGLEC1Q9BZZ2 1709 aa14.66□□□□□ -0.06
AC004828.1-201ENST00000555303 FER1L4A9Z1Z3 1794 aa14.65□□□□□ -0.06
AC004828.1-201ENST00000555303 CDC42BPAQ5VT25 1732 aa14.65□□□□□ -0.06
AC004828.1-201ENST00000555303 ABCC1P33527 1531 aa14.64□□□□□ -0.07
AC004828.1-201ENST00000555303 C9orf84Q5VXU9 1444 aa14.64□□□□□ -0.07
AC004828.1-201ENST00000555303 ITSN2Q9NZM3 1697 aa14.64□□□□□ -0.07
AC004828.1-201ENST00000555303 ATP10AO60312 1499 aa14.63□□□□□ -0.07
AC004828.1-201ENST00000555303 REREQ9P2R6 1566 aa14.63□□□□□ -0.07
AC004828.1-201ENST00000555303 ARHGEF12Q9NZN5 1544 aa14.61□□□□□ -0.07
AC004828.1-201ENST00000555303 DIP2CQ9Y2E4 1556 aa14.6□□□□□ -0.07
AC004828.1-201ENST00000555303 MLH3Q9UHC1 1453 aa14.59□□□□□ -0.07
AC004828.1-201ENST00000555303 ABCA6Q8N139 1617 aa14.58□□□□□ -0.08
AC004828.1-201ENST00000555303 LMTK3Q96Q04 1460 aa14.57□□□□□ -0.08
AC004828.1-201ENST00000555303 EHBP1L1Q8N3D4 1523 aa14.55□□□□□ -0.08
AC004828.1-201ENST00000555303 SAMD9LQ8IVG5 1584 aa14.55□□□□□ -0.08
AC004828.1-201ENST00000555303 KIDINS220Q9ULH0 1771 aa14.55□□□□□ -0.08
AC004828.1-201ENST00000555303 PLEKHH2Q8IVE3 1493 aa14.54□□□□□ -0.08
AC004828.1-201ENST00000555303 AGLP35573 1532 aa14.54□□□□□ -0.08
AC004828.1-201ENST00000555303 GPATCH8Q9UKJ3 1502 aaKnown RBP14.54□□□□□ -0.08
AC004828.1-201ENST00000555303 PREX1Q8TCU6 1659 aa14.53□□□□□ -0.08
AC004828.1-201ENST00000555303 CEP162Q5TB80 1403 aa14.53□□□□□ -0.08
AC004828.1-201ENST00000555303 AFAP1Q8N556 730 aa14.53□□□□□ -0.08
AC004828.1-201ENST00000555303 SYCP2Q9BX26 1530 aa14.52□□□□□ -0.08
AC004828.1-201ENST00000555303 TRAPPC8Q9Y2L5 1435 aa14.52□□□□□ -0.08
AC004828.1-201ENST00000555303 MTUS2Q5JR59 1369 aa14.51□□□□□ -0.09
AC004828.1-201ENST00000555303 KIAA1107Q9UPP5 1409 aa14.5□□□□□ -0.09
AC004828.1-201ENST00000555303 TIAM1Q13009 1591 aa14.5□□□□□ -0.09
AC004828.1-201ENST00000555303 CCNB3Q8WWL7 1395 aa14.49□□□□□ -0.09
AC004828.1-201ENST00000555303 INO80Q9ULG1 1556 aaPredicted RBP14.49□□□□□ -0.09
AC004828.1-201ENST00000555303 MLECQ14165 292 aa14.49□□□□□ -0.09
AC004828.1-201ENST00000555303 MYT1LQ9UL68 1186 aa14.48□□□□□ -0.09
AC004828.1-201ENST00000555303 ATP7AQ04656 1500 aa14.47□□□□□ -0.09
AC004828.1-201ENST00000555303 SUPT6HQ7KZ85 1726 aaKnown RBP14.47□□□□□ -0.09
AC004828.1-201ENST00000555303 MROH2AA6NES4 1674 aa14.46□□□□□ -0.09
AC004828.1-201ENST00000555303 C3P01024 1663 aa14.46□□□□□ -0.09
AC004828.1-201ENST00000555303 SETD1BQ9UPS6 1966 aaKnown RBP14.46□□□□□ -0.09
AC004828.1-201ENST00000555303 PLXNC1O60486 1568 aa14.45□□□□□ -0.1
AC004828.1-201ENST00000555303 CNTLNQ9NXG0 1405 aa14.45□□□□□ -0.1
AC004828.1-201ENST00000555303 CFDP1Q9UEE9 299 aaPredicted RBP14.45□□□□□ -0.1
AC004828.1-201ENST00000555303 ADGBQ8N7X0 1667 aa14.45□□□□□ -0.1
AC004828.1-201ENST00000555303 ILDR1Q86SU0 546 aaPredicted RBP14.44□□□□□ -0.1
AC004828.1-201ENST00000555303 SPAG9O60271 1321 aaKnown RBP14.43□□□□□ -0.1
AC004828.1-201ENST00000555303 ZNF777Q9ULD5 760 aaPredicted RBP14.43□□□□□ -0.1
AC004828.1-201ENST00000555303 UHRF1BP1Q6BDS2 1440 aa14.41□□□□□ -0.1
AC004828.1-201ENST00000555303 VPS8Q8N3P4 1428 aa14.41□□□□□ -0.1
AC004828.1-201ENST00000555303 ESF1Q9H501 851 aaKnown RBP14.4□□□□□ -0.1
AC004828.1-201ENST00000555303 A2MP01023 1474 aa14.39□□□□□ -0.11
AC004828.1-201ENST00000555303 NCOA2Q15596 1464 aa14.39□□□□□ -0.11
AC004828.1-201ENST00000555303 HNRNPMP52272 730 aaKnown RBP eCLIP14.39□□□□□ -0.11
AC004828.1-201ENST00000555303 PLPPR3Q6T4P5 718 aa14.39□□□□□ -0.11
AC004828.1-201ENST00000555303 MBD5Q9P267 1494 aa14.38□□□□□ -0.11
AC004828.1-201ENST00000555303 MAP3K1Q13233 1512 aa14.38□□□□□ -0.11
AC004828.1-201ENST00000555303 RTEL1-TNFRSF6BF6WH68 1400 aa14.38□□□□□ -0.11
AC004828.1-201ENST00000555303 HSPA2P54652 639 aa14.37□□□□□ -0.11
AC004828.1-201ENST00000555303 NPATQ14207 1427 aa14.36□□□□□ -0.11
AC004828.1-201ENST00000555303 CAMSAP2Q08AD1 1489 aa14.36□□□□□ -0.11
AC004828.1-201ENST00000555303 CCDC141Q6ZP82 1450 aa14.36□□□□□ -0.11
AC004828.1-201ENST00000555303 CLTCQ00610 1675 aaKnown RBP14.36□□□□□ -0.11
AC004828.1-201ENST00000555303 FAM135AQ9P2D6 1515 aa14.36□□□□□ -0.11
AC004828.1-201ENST00000555303 ARHGEF5Q12774 1597 aa14.35□□□□□ -0.11
AC004828.1-201ENST00000555303 STRCQ7RTU9 1775 aa14.35□□□□□ -0.11
AC004828.1-201ENST00000555303 CEBPAP49715 358 aaPredicted RBP14.35□□□□□ -0.11
AC004828.1-201ENST00000555303 LRRC9Q6ZRR7 1453 aa14.35□□□□□ -0.11
AC004828.1-201ENST00000555303 FBXO41Q8TF61 875 aa14.34□□□□□ -0.11
AC004828.1-201ENST00000555303 ZNF142P52746 1687 aaPredicted RBP14.33□□□□□ -0.11
AC004828.1-201ENST00000555303 RSPH4AQ5TD94 716 aa14.32□□□□□ -0.12
AC004828.1-201ENST00000555303 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
AC004828.1-201ENST00000555303 ZNF644Q9H582 1327 aaPredicted RBP14.32□□□□□ -0.12
AC004828.1-201ENST00000555303 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
AC004828.1-201ENST00000555303 MYO3AQ8NEV4 1616 aa14.3□□□□□ -0.12
AC004828.1-201ENST00000555303 ZMYM3Q14202 1370 aa14.29□□□□□ -0.12
AC004828.1-201ENST00000555303 DHX29Q7Z478 1369 aaKnown RBP14.29□□□□□ -0.12
AC004828.1-201ENST00000555303 MAST1Q9Y2H9 1570 aa14.29□□□□□ -0.12
AC004828.1-201ENST00000555303 PTPRTO14522 1441 aa14.28□□□□□ -0.12
AC004828.1-201ENST00000555303 KDM5DQ9BY66 1539 aa14.27□□□□□ -0.12
AC004828.1-201ENST00000555303 MIA2Q96PC5 1412 aa14.27□□□□□ -0.12
AC004828.1-201ENST00000555303 LOC105371045A0A1W2PR82 267 aa14.27□□□□□ -0.13
AC004828.1-201ENST00000555303 NCOA1Q15788 1441 aa14.26□□□□□ -0.13
AC004828.1-201ENST00000555303 EIF2AK4Q9P2K8 1649 aaKnown RBP14.26□□□□□ -0.13
AC004828.1-201ENST00000555303 CEP170BQ9Y4F5 1589 aaPredicted RBP14.26□□□□□ -0.13
AC004828.1-201ENST00000555303 PTPRKQ15262 1439 aa14.25□□□□□ -0.13
AC004828.1-201ENST00000555303 MYOM3Q5VTT5 1437 aa14.25□□□□□ -0.13
AC004828.1-201ENST00000555303 CAMSAP1Q5T5Y3 1602 aa14.25□□□□□ -0.13
AC004828.1-201ENST00000555303 ZC3H13Q5T200 1668 aaKnown RBP14.24□□□□□ -0.13
AC004828.1-201ENST00000555303 RNF17Q9BXT8 1623 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms