RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 DNMT1P26358 1616 aaKnown RBP14.84□□□□□ -0.03
MTHFD1-210ENST00000555252 DAPK1P53355 1430 aa14.84□□□□□ -0.03
MTHFD1-210ENST00000555252 CHIC2Q9UKJ5 165 aa14.83□□□□□ -0.03
MTHFD1-210ENST00000555252 KDM5BQ9UGL1 1544 aa14.83□□□□□ -0.04
MTHFD1-210ENST00000555252 TROQ12816 1431 aaPredicted RBP14.82□□□□□ -0.04
MTHFD1-210ENST00000555252 CARMIL2Q6F5E8 1435 aa14.82□□□□□ -0.04
MTHFD1-210ENST00000555252 CHMP7Q8WUX9 453 aaPredicted RBP14.82□□□□□ -0.04
MTHFD1-210ENST00000555252 TRIM52Q96A61 297 aa14.82□□□□□ -0.04
MTHFD1-210ENST00000555252 CEP170Q5SW79 1584 aa14.81□□□□□ -0.04
MTHFD1-210ENST00000555252 ABCC5O15440 1437 aa14.81□□□□□ -0.04
MTHFD1-210ENST00000555252 DENND4BO75064 1496 aaPredicted RBP14.8□□□□□ -0.04
MTHFD1-210ENST00000555252 MPHOSPH9Q99550 1183 aa14.8□□□□□ -0.04
MTHFD1-210ENST00000555252 NUP160Q12769 1436 aa14.8□□□□□ -0.04
MTHFD1-210ENST00000555252 ITSN2Q9NZM3 1697 aa14.8□□□□□ -0.04
MTHFD1-210ENST00000555252 KDM6BO15054 1643 aa14.79□□□□□ -0.04
MTHFD1-210ENST00000555252 ADCY10Q96PN6 1610 aa14.79□□□□□ -0.04
MTHFD1-210ENST00000555252 MSH5O43196 834 aa14.79□□□□□ -0.04
MTHFD1-210ENST00000555252 ARID3CA6NKF2 412 aa14.77□□□□□ -0.05
MTHFD1-210ENST00000555252 ERICH6Q7L0X2 663 aa14.77□□□□□ -0.05
MTHFD1-210ENST00000555252 JPH4Q96JJ6 628 aa14.73□□□□□ -0.05
MTHFD1-210ENST00000555252 HIRIP3Q9BW71 556 aaPredicted RBP14.73□□□□□ -0.05
MTHFD1-210ENST00000555252 PRG4Q92954 1404 aaPredicted RBP14.73□□□□□ -0.05
MTHFD1-210ENST00000555252 CAMSAP2Q08AD1 1489 aa14.73□□□□□ -0.05
MTHFD1-210ENST00000555252 POLR1AO95602 1720 aaPredicted RBP14.73□□□□□ -0.05
MTHFD1-210ENST00000555252 PLB1Q6P1J6 1458 aa14.73□□□□□ -0.05
MTHFD1-210ENST00000555252 ADGBQ8N7X0 1667 aa14.73□□□□□ -0.05
MTHFD1-210ENST00000555252 ANKRD30BQ9BXX2 1392 aa14.73□□□□□ -0.05
MTHFD1-210ENST00000555252 GPATCH8Q9UKJ3 1502 aaKnown RBP14.73□□□□□ -0.05
MTHFD1-210ENST00000555252 ADGRL2O95490 1459 aa14.72□□□□□ -0.05
MTHFD1-210ENST00000555252 RPRD2Q5VT52 1461 aaKnown RBP14.72□□□□□ -0.05
MTHFD1-210ENST00000555252 CFDP1Q9UEE9 299 aaPredicted RBP14.72□□□□□ -0.05
MTHFD1-210ENST00000555252 PPP4R2Q9NY27 417 aa14.72□□□□□ -0.05
MTHFD1-210ENST00000555252 EIF4G2P78344 907 aaKnown RBP eCLIP14.71□□□□□ -0.05
MTHFD1-210ENST00000555252 ABCA8O94911 1581 aa14.7□□□□□ -0.06
MTHFD1-210ENST00000555252 ZNF644Q9H582 1327 aaPredicted RBP14.7□□□□□ -0.06
MTHFD1-210ENST00000555252 NCOA1Q15788 1441 aa14.69□□□□□ -0.06
MTHFD1-210ENST00000555252 CROCC2H7BZ55 1655 aa14.69□□□□□ -0.06
MTHFD1-210ENST00000555252 HSPA5P11021 654 aaKnown RBP14.69□□□□□ -0.06
MTHFD1-210ENST00000555252 FBLN2P98095 1184 aa14.69□□□□□ -0.06
MTHFD1-210ENST00000555252 L3MBTL2Q969R5 705 aa14.69□□□□□ -0.06
MTHFD1-210ENST00000555252 SLC4A1APQ9BWU0 796 aaKnown RBP14.67□□□□□ -0.06
MTHFD1-210ENST00000555252 KIF14Q15058 1648 aa14.67□□□□□ -0.06
MTHFD1-210ENST00000555252 PLEKHD1A6NEE1 506 aa14.67□□□□□ -0.06
MTHFD1-210ENST00000555252 HNRNPUQ00839 825 aaKnown RBP eCLIP14.67□□□□□ -0.06
MTHFD1-210ENST00000555252 ANKRD30AQ9BXX3 1397 aa14.67□□□□□ -0.06
MTHFD1-210ENST00000555252 TEX14Q8IWB6 1497 aa14.66□□□□□ -0.06
MTHFD1-210ENST00000555252 SHANK2Q9UPX8 1470 aa14.66□□□□□ -0.06
MTHFD1-210ENST00000555252 PZPP20742 1482 aa14.65□□□□□ -0.06
MTHFD1-210ENST00000555252 CNTLNQ9NXG0 1405 aa14.64□□□□□ -0.07
MTHFD1-210ENST00000555252 ABCC10Q5T3U5 1492 aa14.64□□□□□ -0.07
MTHFD1-210ENST00000555252 WASHC2AQ641Q2 1341 aa14.63□□□□□ -0.07
MTHFD1-210ENST00000555252 ATP10BO94823 1461 aa14.63□□□□□ -0.07
MTHFD1-210ENST00000555252 KIAA1107Q9UPP5 1409 aa14.62□□□□□ -0.07
MTHFD1-210ENST00000555252 FOXD1Q16676 465 aa14.61□□□□□ -0.07
MTHFD1-210ENST00000555252 CDC42BPAQ5VT25 1732 aa14.61□□□□□ -0.07
MTHFD1-210ENST00000555252 ZNF777Q9ULD5 760 aaPredicted RBP14.6□□□□□ -0.07
MTHFD1-210ENST00000555252 ZBED9Q6R2W3 1325 aa14.6□□□□□ -0.07
MTHFD1-210ENST00000555252 ANKRD50Q9ULJ7 1429 aa14.59□□□□□ -0.07
MTHFD1-210ENST00000555252 CCDC7Q96M83 1385 aa14.59□□□□□ -0.07
MTHFD1-210ENST00000555252 ARHGEF5Q12774 1597 aa14.58□□□□□ -0.07
MTHFD1-210ENST00000555252 PTPRGP23470 1445 aa14.57□□□□□ -0.08
MTHFD1-210ENST00000555252 KDM5DQ9BY66 1539 aa14.57□□□□□ -0.08
MTHFD1-210ENST00000555252 C9orf84Q5VXU9 1444 aa14.57□□□□□ -0.08
MTHFD1-210ENST00000555252 SPATA31E1Q6ZUB1 1445 aa14.57□□□□□ -0.08
MTHFD1-210ENST00000555252 NBPF8Q3BBV2 869 aa14.57□□□□□ -0.08
MTHFD1-210ENST00000555252 MBD5Q9P267 1494 aa14.56□□□□□ -0.08
MTHFD1-210ENST00000555252 TSPY4P0CV99 314 aa14.56□□□□□ -0.08
MTHFD1-210ENST00000555252 TSPY10P0CW01 314 aa14.56□□□□□ -0.08
MTHFD1-210ENST00000555252 RSPH4AQ5TD94 716 aa14.56□□□□□ -0.08
MTHFD1-210ENST00000555252 CHD1O14646 1710 aa14.54□□□□□ -0.08
MTHFD1-210ENST00000555252 DEKP35659 375 aaKnown RBP14.54□□□□□ -0.08
MTHFD1-210ENST00000555252 PKD2Q13563 968 aa14.53□□□□□ -0.08
MTHFD1-210ENST00000555252 NOP58Q9Y2X3 529 aaKnown RBP14.53□□□□□ -0.08
MTHFD1-210ENST00000555252 ARID4BQ4LE39 1312 aaPredicted RBP14.52□□□□□ -0.09
MTHFD1-210ENST00000555252 UHRF1BP1Q6BDS2 1440 aa14.51□□□□□ -0.09
MTHFD1-210ENST00000555252 ARHGEF12Q9NZN5 1544 aa14.51□□□□□ -0.09
MTHFD1-210ENST00000555252 PREX2Q70Z35 1606 aa14.51□□□□□ -0.09
MTHFD1-210ENST00000555252 NUP155O75694 1391 aa14.51□□□□□ -0.09
MTHFD1-210ENST00000555252 SHROOM2Q13796 1616 aa14.5□□□□□ -0.09
MTHFD1-210ENST00000555252 IRX6P78412 446 aaPredicted RBP14.5□□□□□ -0.09
MTHFD1-210ENST00000555252 PRKRIP1Q9H875 184 aaPredicted RBP14.5□□□□□ -0.09
MTHFD1-210ENST00000555252 CCDC141Q6ZP82 1450 aa14.5□□□□□ -0.09
MTHFD1-210ENST00000555252 SMG6Q86US8 1419 aaKnown RBP14.5□□□□□ -0.09
MTHFD1-210ENST00000555252 C11orf95C9JLR9 678 aaPredicted RBP14.5□□□□□ -0.09
MTHFD1-210ENST00000555252 KIF15Q9NS87 1388 aa14.49□□□□□ -0.09
MTHFD1-210ENST00000555252 KIF7Q2M1P5 1343 aa14.49□□□□□ -0.09
MTHFD1-210ENST00000555252 SAMD9LQ8IVG5 1584 aa14.46□□□□□ -0.09
MTHFD1-210ENST00000555252 MAST1Q9Y2H9 1570 aa14.46□□□□□ -0.09
MTHFD1-210ENST00000555252 RALGAPBQ86X10 1494 aa14.46□□□□□ -0.09
MTHFD1-210ENST00000555252 RNF123Q5XPI4 1314 aa14.46□□□□□ -0.09
MTHFD1-210ENST00000555252 CDC42BPBQ9Y5S2 1711 aa14.46□□□□□ -0.1
MTHFD1-210ENST00000555252 USP47Q96K76 1375 aa14.46□□□□□ -0.1
MTHFD1-210ENST00000555252 PLEKHH2Q8IVE3 1493 aa14.45□□□□□ -0.1
MTHFD1-210ENST00000555252 HNRNPMP52272 730 aaKnown RBP eCLIP14.45□□□□□ -0.1
MTHFD1-210ENST00000555252 KDM5CP41229 1560 aa14.44□□□□□ -0.1
MTHFD1-210ENST00000555252 ROCK2O75116 1388 aaKnown RBP14.44□□□□□ -0.1
MTHFD1-210ENST00000555252 B4GALNT3Q6L9W6 998 aa14.43□□□□□ -0.1
MTHFD1-210ENST00000555252 MRS2Q9HD23 443 aa14.43□□□□□ -0.1
MTHFD1-210ENST00000555252 ABCC2Q92887 1545 aa14.43□□□□□ -0.1
MTHFD1-210ENST00000555252 ANP32AP39687 249 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms