RNA–Protein interactions for RNA: ENST00000555185.5

PRKCH-213, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-213ENST00000555185 SAMD9Q5K651 1589 aa15.08■□□□□ 0
PRKCH-213ENST00000555185 CFAP74Q9C0B2 1584 aa15.08■□□□□ 0
PRKCH-213ENST00000555185 ARHGEF12Q9NZN5 1544 aa15.07■□□□□ 0
PRKCH-213ENST00000555185 RANGAP1P46060 587 aaPredicted RBP15.07■□□□□ 0
PRKCH-213ENST00000555185 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
PRKCH-213ENST00000555185 LTBP4Q8N2S1 1624 aa15.03■□□□□ -0
PRKCH-213ENST00000555185 MAGI2Q86UL8 1455 aa15.03■□□□□ -0
PRKCH-213ENST00000555185 UHRF1BP1Q6BDS2 1440 aa15.03■□□□□ -0
PRKCH-213ENST00000555185 PLEKHD1A6NEE1 506 aa15.03■□□□□ -0
PRKCH-213ENST00000555185 SCAPERQ9BY12 1400 aa15.02■□□□□ -0
PRKCH-213ENST00000555185 ATP10AO60312 1499 aa15.01□□□□□ -0.01
PRKCH-213ENST00000555185 C9orf84Q5VXU9 1444 aa15□□□□□ -0.01
PRKCH-213ENST00000555185 SETD1BQ9UPS6 1966 aaKnown RBP15□□□□□ -0.01
PRKCH-213ENST00000555185 PTPRTO14522 1441 aa14.99□□□□□ -0.01
PRKCH-213ENST00000555185 C3P01024 1663 aa14.97□□□□□ -0.01
PRKCH-213ENST00000555185 CDK13Q14004 1512 aaKnown RBP14.96□□□□□ -0.02
PRKCH-213ENST00000555185 PLCH2O75038 1416 aa14.93□□□□□ -0.02
PRKCH-213ENST00000555185 UBAP1LF5GYI3 381 aa14.92□□□□□ -0.02
PRKCH-213ENST00000555185 IQSEC2Q5JU85 1478 aa14.92□□□□□ -0.02
PRKCH-213ENST00000555185 NCOA1Q15788 1441 aa14.92□□□□□ -0.02
PRKCH-213ENST00000555185 MYT1LQ9UL68 1186 aa14.91□□□□□ -0.02
PRKCH-213ENST00000555185 ZNF335Q9H4Z2 1342 aaPredicted RBP14.91□□□□□ -0.02
PRKCH-213ENST00000555185 MYO5CQ9NQX4 1742 aa14.9□□□□□ -0.02
PRKCH-213ENST00000555185 AFAP1Q8N556 730 aa14.9□□□□□ -0.02
PRKCH-213ENST00000555185 DIP2CQ9Y2E4 1556 aa14.9□□□□□ -0.02
PRKCH-213ENST00000555185 CAMSAP1Q5T5Y3 1602 aa14.88□□□□□ -0.03
PRKCH-213ENST00000555185 ABCA6Q8N139 1617 aa14.88□□□□□ -0.03
PRKCH-213ENST00000555185 NCKAP5LQ9HCH0 1330 aa14.87□□□□□ -0.03
PRKCH-213ENST00000555185 MED1Q15648 1581 aaPredicted RBP14.86□□□□□ -0.03
PRKCH-213ENST00000555185 TRAPPC8Q9Y2L5 1435 aa14.86□□□□□ -0.03
PRKCH-213ENST00000555185 KIF14Q15058 1648 aa14.86□□□□□ -0.03
PRKCH-213ENST00000555185 EFCAB2Q5VUJ9 269 aa14.86□□□□□ -0.03
PRKCH-213ENST00000555185 KDM5CP41229 1560 aa14.85□□□□□ -0.03
PRKCH-213ENST00000555185 ZNF518AQ6AHZ1 1483 aa14.85□□□□□ -0.03
PRKCH-213ENST00000555185 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
PRKCH-213ENST00000555185 ESF1Q9H501 851 aaKnown RBP14.84□□□□□ -0.03
PRKCH-213ENST00000555185 ARHGAP5Q13017 1502 aa14.83□□□□□ -0.04
PRKCH-213ENST00000555185 ATP1B4Q9UN42 357 aaPredicted RBP14.83□□□□□ -0.04
PRKCH-213ENST00000555185 SCAF1Q9H7N4 1312 aaKnown RBP14.83□□□□□ -0.04
PRKCH-213ENST00000555185 HSPA1LP34931 641 aa14.82□□□□□ -0.04
PRKCH-213ENST00000555185 REREQ9P2R6 1566 aa14.81□□□□□ -0.04
PRKCH-213ENST00000555185 PIP4K2BP78356 416 aa14.8□□□□□ -0.04
PRKCH-213ENST00000555185 SUPT6HQ7KZ85 1726 aaKnown RBP14.78□□□□□ -0.04
PRKCH-213ENST00000555185 AGLP35573 1532 aa14.77□□□□□ -0.04
PRKCH-213ENST00000555185 CDC42BPBQ9Y5S2 1711 aa14.77□□□□□ -0.05
PRKCH-213ENST00000555185 MLH3Q9UHC1 1453 aa14.76□□□□□ -0.05
PRKCH-213ENST00000555185 KIDINS220Q9ULH0 1771 aa14.75□□□□□ -0.05
PRKCH-213ENST00000555185 MYO3AQ8NEV4 1616 aa14.74□□□□□ -0.05
PRKCH-213ENST00000555185 ITSN2Q9NZM3 1697 aa14.74□□□□□ -0.05
PRKCH-213ENST00000555185 CNTLNQ9NXG0 1405 aa14.74□□□□□ -0.05
PRKCH-213ENST00000555185 ZMYM3Q14202 1370 aa14.73□□□□□ -0.05
PRKCH-213ENST00000555185 EHMT2Q96KQ7 1210 aa14.73□□□□□ -0.05
PRKCH-213ENST00000555185 PHF23Q9BUL5 403 aaPredicted RBP14.73□□□□□ -0.05
PRKCH-213ENST00000555185 SENP3Q9H4L4 574 aaPredicted RBP14.73□□□□□ -0.05
PRKCH-213ENST00000555185 MROH2AA6NES4 1674 aa14.73□□□□□ -0.05
PRKCH-213ENST00000555185 LRRIQ1Q96JM4 1722 aa14.72□□□□□ -0.05
PRKCH-213ENST00000555185 ZNF142P52746 1687 aaPredicted RBP14.72□□□□□ -0.05
PRKCH-213ENST00000555185 CLTCQ00610 1675 aaKnown RBP14.72□□□□□ -0.05
PRKCH-213ENST00000555185 NPATQ14207 1427 aa14.72□□□□□ -0.05
PRKCH-213ENST00000555185 ABCC1P33527 1531 aa14.71□□□□□ -0.05
PRKCH-213ENST00000555185 TCOF1Q13428 1488 aaKnown RBP14.71□□□□□ -0.05
PRKCH-213ENST00000555185 PPP6R1Q9UPN7 881 aa14.71□□□□□ -0.05
PRKCH-213ENST00000555185 TROQ12816 1431 aaPredicted RBP14.71□□□□□ -0.05
PRKCH-213ENST00000555185 CEP170BQ9Y4F5 1589 aaPredicted RBP14.71□□□□□ -0.05
PRKCH-213ENST00000555185 PLA2R1Q13018 1463 aa14.69□□□□□ -0.06
PRKCH-213ENST00000555185 PKD2Q13563 968 aa14.69□□□□□ -0.06
PRKCH-213ENST00000555185 PREX2Q70Z35 1606 aa14.69□□□□□ -0.06
PRKCH-213ENST00000555185 CDK11AQ9UQ88 783 aaPredicted RBP14.68□□□□□ -0.06
PRKCH-213ENST00000555185 CLIP1P30622 1438 aa14.66□□□□□ -0.06
PRKCH-213ENST00000555185 TOM1O60784 492 aa14.66□□□□□ -0.06
PRKCH-213ENST00000555185 PTPRKQ15262 1439 aa14.66□□□□□ -0.06
PRKCH-213ENST00000555185 ALKQ9UM73 1620 aa14.65□□□□□ -0.06
PRKCH-213ENST00000555185 SAMD9LQ8IVG5 1584 aa14.64□□□□□ -0.07
PRKCH-213ENST00000555185 FMN1Q68DA7 1419 aa14.64□□□□□ -0.07
PRKCH-213ENST00000555185 CDC42BPAQ5VT25 1732 aa14.63□□□□□ -0.07
PRKCH-213ENST00000555185 ARHGAP35Q9NRY4 1499 aa14.63□□□□□ -0.07
PRKCH-213ENST00000555185 POLR1AO95602 1720 aaPredicted RBP14.62□□□□□ -0.07
PRKCH-213ENST00000555185 NEURL4Q96JN8 1562 aa14.62□□□□□ -0.07
PRKCH-213ENST00000555185 ZNF777Q9ULD5 760 aaPredicted RBP14.62□□□□□ -0.07
PRKCH-213ENST00000555185 DNMT1P26358 1616 aaKnown RBP14.62□□□□□ -0.07
PRKCH-213ENST00000555185 GGT6Q6P531 493 aa14.61□□□□□ -0.07
PRKCH-213ENST00000555185 SHANK2Q9UPX8 1470 aa14.61□□□□□ -0.07
PRKCH-213ENST00000555185 CPS1P31327 1500 aa14.61□□□□□ -0.07
PRKCH-213ENST00000555185 SYCP2Q9BX26 1530 aa14.61□□□□□ -0.07
PRKCH-213ENST00000555185 EEA1Q15075 1411 aa14.59□□□□□ -0.07
PRKCH-213ENST00000555185 SPAG9O60271 1321 aaKnown RBP14.59□□□□□ -0.07
PRKCH-213ENST00000555185 A2ML1A8K2U0 1454 aa14.58□□□□□ -0.08
PRKCH-213ENST00000555185 HNRNPMP52272 730 aaKnown RBP eCLIP14.58□□□□□ -0.08
PRKCH-213ENST00000555185 RGS17Q9UGC6 210 aaPredicted RBP14.58□□□□□ -0.08
PRKCH-213ENST00000555185 PLXNC1O60486 1568 aa14.58□□□□□ -0.08
PRKCH-213ENST00000555185 ATP7AQ04656 1500 aa14.57□□□□□ -0.08
PRKCH-213ENST00000555185 VWDEQ8N2E2 1590 aa14.57□□□□□ -0.08
PRKCH-213ENST00000555185 UBTFP17480 764 aaKnown RBP14.57□□□□□ -0.08
PRKCH-213ENST00000555185 A2MP01023 1474 aa14.56□□□□□ -0.08
PRKCH-213ENST00000555185 FBXO31Q5XUX0 539 aaPredicted RBP14.54□□□□□ -0.08
PRKCH-213ENST00000555185 INO80Q9ULG1 1556 aaPredicted RBP14.54□□□□□ -0.08
PRKCH-213ENST00000555185 STRCP1A6NGW2 1772 aa14.54□□□□□ -0.08
PRKCH-213ENST00000555185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.53□□□□□ -0.08
PRKCH-213ENST00000555185 GPATCH8Q9UKJ3 1502 aaKnown RBP14.5□□□□□ -0.09
PRKCH-213ENST00000555185 TNRQ92752 1358 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms