RNA–Protein interactions for RNA: ENST00000554991.5

STRN3-205, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-205ENST00000554991 DENND4BO75064 1496 aaPredicted RBP13.8□□□□□ -0.2
STRN3-205ENST00000554991 ZFYVE16Q7Z3T8 1539 aa13.79□□□□□ -0.2
STRN3-205ENST00000554991 EHBP1L1Q8N3D4 1523 aa13.78□□□□□ -0.2
STRN3-205ENST00000554991 HECW2Q9P2P5 1572 aa13.78□□□□□ -0.2
STRN3-205ENST00000554991 FER1L4A9Z1Z3 1794 aa13.78□□□□□ -0.2
STRN3-205ENST00000554991 SUPT6HQ7KZ85 1726 aaKnown RBP13.77□□□□□ -0.21
STRN3-205ENST00000554991 ABCC1P33527 1531 aa13.76□□□□□ -0.21
STRN3-205ENST00000554991 PLCH2O75038 1416 aa13.76□□□□□ -0.21
STRN3-205ENST00000554991 RIMS1Q86UR5 1692 aaKnown RBP13.75□□□□□ -0.21
STRN3-205ENST00000554991 POGZQ7Z3K3 1410 aa13.75□□□□□ -0.21
STRN3-205ENST00000554991 ADAMTSL3P82987 1691 aa13.75□□□□□ -0.21
STRN3-205ENST00000554991 MADDQ8WXG6 1647 aa13.75□□□□□ -0.21
STRN3-205ENST00000554991 SIGLEC1Q9BZZ2 1709 aa13.74□□□□□ -0.21
STRN3-205ENST00000554991 KDM5CP41229 1560 aa13.74□□□□□ -0.21
STRN3-205ENST00000554991 TIAM1Q13009 1591 aa13.72□□□□□ -0.21
STRN3-205ENST00000554991 SAMD9LQ8IVG5 1584 aa13.72□□□□□ -0.21
STRN3-205ENST00000554991 ZNF518AQ6AHZ1 1483 aa13.72□□□□□ -0.21
STRN3-205ENST00000554991 ABCA6Q8N139 1617 aa13.72□□□□□ -0.21
STRN3-205ENST00000554991 RAPGEF3O95398 923 aa13.71□□□□□ -0.21
STRN3-205ENST00000554991 MAGI2Q86UL8 1455 aa13.7□□□□□ -0.22
STRN3-205ENST00000554991 KDM4FA0A1W2PPD8 638 aa13.7□□□□□ -0.22
STRN3-205ENST00000554991 SCAPERQ9BY12 1400 aa13.7□□□□□ -0.22
STRN3-205ENST00000554991 SYCP2Q9BX26 1530 aa13.69□□□□□ -0.22
STRN3-205ENST00000554991 DIP2CQ9Y2E4 1556 aa13.69□□□□□ -0.22
STRN3-205ENST00000554991 MTUS2Q5JR59 1369 aa13.69□□□□□ -0.22
STRN3-205ENST00000554991 VPS8Q8N3P4 1428 aa13.67□□□□□ -0.22
STRN3-205ENST00000554991 EFCAB2Q5VUJ9 269 aa13.67□□□□□ -0.22
STRN3-205ENST00000554991 KIDINS220Q9ULH0 1771 aa13.67□□□□□ -0.22
STRN3-205ENST00000554991 YEATS2Q9ULM3 1422 aa13.65□□□□□ -0.22
STRN3-205ENST00000554991 REREQ9P2R6 1566 aa13.65□□□□□ -0.22
STRN3-205ENST00000554991 INO80Q9ULG1 1556 aaPredicted RBP13.65□□□□□ -0.22
STRN3-205ENST00000554991 ADGBQ8N7X0 1667 aa13.64□□□□□ -0.23
STRN3-205ENST00000554991 C9orf84Q5VXU9 1444 aa13.64□□□□□ -0.23
STRN3-205ENST00000554991 ARID4BQ4LE39 1312 aaPredicted RBP13.63□□□□□ -0.23
STRN3-205ENST00000554991 PLEKHH2Q8IVE3 1493 aa13.62□□□□□ -0.23
STRN3-205ENST00000554991 GPATCH8Q9UKJ3 1502 aaKnown RBP13.62□□□□□ -0.23
STRN3-205ENST00000554991 CCNB3Q8WWL7 1395 aa13.61□□□□□ -0.23
STRN3-205ENST00000554991 ATP7AQ04656 1500 aa13.6□□□□□ -0.23
STRN3-205ENST00000554991 ARHGEF12Q9NZN5 1544 aa13.6□□□□□ -0.23
STRN3-205ENST00000554991 ATP10AO60312 1499 aa13.6□□□□□ -0.23
STRN3-205ENST00000554991 PTPRMP28827 1452 aa13.6□□□□□ -0.23
STRN3-205ENST00000554991 LOC105371045A0A1W2PR82 267 aa13.59□□□□□ -0.23
STRN3-205ENST00000554991 MYT1LQ9UL68 1186 aa13.59□□□□□ -0.23
STRN3-205ENST00000554991 NCOA2Q15596 1464 aa13.59□□□□□ -0.23
STRN3-205ENST00000554991 MLH3Q9UHC1 1453 aa13.59□□□□□ -0.23
STRN3-205ENST00000554991 PREX1Q8TCU6 1659 aa13.59□□□□□ -0.23
STRN3-205ENST00000554991 MAP3K1Q13233 1512 aa13.58□□□□□ -0.24
STRN3-205ENST00000554991 TRAPPC8Q9Y2L5 1435 aa13.57□□□□□ -0.24
STRN3-205ENST00000554991 CROCC2H7BZ55 1655 aa13.57□□□□□ -0.24
STRN3-205ENST00000554991 MROH2AA6NES4 1674 aa13.56□□□□□ -0.24
STRN3-205ENST00000554991 C3P01024 1663 aa13.56□□□□□ -0.24
STRN3-205ENST00000554991 CAMSAP2Q08AD1 1489 aa13.56□□□□□ -0.24
STRN3-205ENST00000554991 LRRC9Q6ZRR7 1453 aa13.56□□□□□ -0.24
STRN3-205ENST00000554991 ZNF777Q9ULD5 760 aaPredicted RBP13.56□□□□□ -0.24
STRN3-205ENST00000554991 PLXNC1O60486 1568 aa13.54□□□□□ -0.24
STRN3-205ENST00000554991 AGLP35573 1532 aa13.54□□□□□ -0.24
STRN3-205ENST00000554991 CLTCQ00610 1675 aaKnown RBP13.53□□□□□ -0.24
STRN3-205ENST00000554991 CFDP1Q9UEE9 299 aaPredicted RBP13.53□□□□□ -0.24
STRN3-205ENST00000554991 ARHGEF5Q12774 1597 aa13.53□□□□□ -0.24
STRN3-205ENST00000554991 KIAA1107Q9UPP5 1409 aa13.52□□□□□ -0.25
STRN3-205ENST00000554991 CCDC141Q6ZP82 1450 aa13.51□□□□□ -0.25
STRN3-205ENST00000554991 AFAP1Q8N556 730 aa13.51□□□□□ -0.25
STRN3-205ENST00000554991 MLECQ14165 292 aa13.5□□□□□ -0.25
STRN3-205ENST00000554991 PTPN23Q9H3S7 1636 aa13.49□□□□□ -0.25
STRN3-205ENST00000554991 SPAG9O60271 1321 aaKnown RBP13.48□□□□□ -0.25
STRN3-205ENST00000554991 PHF23Q9BUL5 403 aaPredicted RBP13.48□□□□□ -0.25
STRN3-205ENST00000554991 MAST1Q9Y2H9 1570 aa13.47□□□□□ -0.25
STRN3-205ENST00000554991 A2MP01023 1474 aa13.47□□□□□ -0.25
STRN3-205ENST00000554991 SETD1BQ9UPS6 1966 aaKnown RBP13.47□□□□□ -0.25
STRN3-205ENST00000554991 LMTK3Q96Q04 1460 aa13.46□□□□□ -0.25
STRN3-205ENST00000554991 MYOM3Q5VTT5 1437 aa13.46□□□□□ -0.26
STRN3-205ENST00000554991 MBD5Q9P267 1494 aa13.45□□□□□ -0.26
STRN3-205ENST00000554991 HNRNPMP52272 730 aaKnown RBP eCLIP13.45□□□□□ -0.268e-7■■■■□ 26.4
STRN3-205ENST00000554991 APLP2Q06481 763 aa13.45□□□□□ -0.26
STRN3-205ENST00000554991 PLPPR3Q6T4P5 718 aa13.45□□□□□ -0.26
STRN3-205ENST00000554991 EIF2AK4Q9P2K8 1649 aaKnown RBP13.45□□□□□ -0.26
STRN3-205ENST00000554991 ZC3H13Q5T200 1668 aaKnown RBP13.44□□□□□ -0.26
STRN3-205ENST00000554991 ZNF142P52746 1687 aaPredicted RBP13.44□□□□□ -0.26
STRN3-205ENST00000554991 DNMT1P26358 1616 aaKnown RBP13.43□□□□□ -0.26
STRN3-205ENST00000554991 MYO3AQ8NEV4 1616 aa13.43□□□□□ -0.26
STRN3-205ENST00000554991 CEP152O94986 1710 aa13.42□□□□□ -0.26
STRN3-205ENST00000554991 CNTLNQ9NXG0 1405 aa13.42□□□□□ -0.26
STRN3-205ENST00000554991 ZNF644Q9H582 1327 aaPredicted RBP13.41□□□□□ -0.26
STRN3-205ENST00000554991 RTEL1-TNFRSF6BF6WH68 1400 aa13.41□□□□□ -0.26
STRN3-205ENST00000554991 MIA2Q96PC5 1412 aa13.41□□□□□ -0.26
STRN3-205ENST00000554991 RNF17Q9BXT8 1623 aaKnown RBP13.41□□□□□ -0.26
STRN3-205ENST00000554991 FAM135AQ9P2D6 1515 aa13.4□□□□□ -0.26
STRN3-205ENST00000554991 ESF1Q9H501 851 aaKnown RBP13.4□□□□□ -0.26
STRN3-205ENST00000554991 KDM5DQ9BY66 1539 aa13.39□□□□□ -0.27
STRN3-205ENST00000554991 SHANK2Q9UPX8 1470 aa13.38□□□□□ -0.27
STRN3-205ENST00000554991 KANK4Q5T7N3 995 aaPredicted RBP13.37□□□□□ -0.27
STRN3-205ENST00000554991 UHRF1BP1Q6BDS2 1440 aa13.37□□□□□ -0.27
STRN3-205ENST00000554991 POLR1AO95602 1720 aaPredicted RBP13.36□□□□□ -0.27
STRN3-205ENST00000554991 CAMSAP1Q5T5Y3 1602 aa13.36□□□□□ -0.27
STRN3-205ENST00000554991 FGD6Q6ZV73 1430 aa13.36□□□□□ -0.27
STRN3-205ENST00000554991 STRCQ7RTU9 1775 aa13.35□□□□□ -0.27
STRN3-205ENST00000554991 CFAP65Q6ZU64 1925 aaKnown RBP13.35□□□□□ -0.27
STRN3-205ENST00000554991 TCOF1Q13428 1488 aaKnown RBP13.35□□□□□ -0.27
STRN3-205ENST00000554991 DUOX2Q9NRD8 1548 aa13.34□□□□□ -0.27
STRN3-205ENST00000554991 DEPDC5O75140 1603 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms