RNA–Protein interactions for RNA: ENST00000554991.5

STRN3-205, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-205ENST00000554991 NISCHQ9Y2I1 1504 aa21.09■□□□□ 0.97
STRN3-205ENST00000554991 CCDC180Q9P1Z9 1646 aa19.04■□□□□ 0.64
STRN3-205ENST00000554991 ABCC9O60706 1549 aa18.55■□□□□ 0.56
STRN3-205ENST00000554991 RB1CC1Q8TDY2 1594 aa17.89■□□□□ 0.45
STRN3-205ENST00000554991 NACADO15069 1562 aa17.79■□□□□ 0.44
STRN3-205ENST00000554991 UNC13AQ9UPW8 1703 aa17.67■□□□□ 0.42
STRN3-205ENST00000554991 ZCCHC6Q5VYS8 1495 aaKnown RBP17.58■□□□□ 0.41
STRN3-205ENST00000554991 MYO15BQ96JP2 1530 aa17.57■□□□□ 0.4
STRN3-205ENST00000554991 DCAF8L2P0C7V8 631 aa17.53■□□□□ 0.4
STRN3-205ENST00000554991 DCAF1Q9Y4B6 1507 aa17.46■□□□□ 0.39
STRN3-205ENST00000554991 SCRIBQ14160 1630 aa17.29■□□□□ 0.36
STRN3-205ENST00000554991 BICRAQ9NZM4 1560 aa17.29■□□□□ 0.36
STRN3-205ENST00000554991 PABPN1Q86U42 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
STRN3-205ENST00000554991 SHROOM4Q9ULL8 1493 aa17.13■□□□□ 0.33
STRN3-205ENST00000554991 DNAJC5BQ9UF47 199 aa16.91■□□□□ 0.3
STRN3-205ENST00000554991 EIF4G1Q04637 1599 aaKnown RBP16.87■□□□□ 0.29
STRN3-205ENST00000554991 CC2D2AQ9P2K1 1620 aa16.86■□□□□ 0.29
STRN3-205ENST00000554991 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
STRN3-205ENST00000554991 SMARCA4P51532 1647 aa16.51■□□□□ 0.23
STRN3-205ENST00000554991 BAZ1AQ9NRL2 1556 aaPredicted RBP16.43■□□□□ 0.22
STRN3-205ENST00000554991 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
STRN3-205ENST00000554991 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
STRN3-205ENST00000554991 ATAD2BQ9ULI0 1458 aa16.3■□□□□ 0.2
STRN3-205ENST00000554991 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
STRN3-205ENST00000554991 NCAPD3P42695 1498 aa16.28■□□□□ 0.2
STRN3-205ENST00000554991 MROH2BQ7Z745 1585 aa16.25■□□□□ 0.19
STRN3-205ENST00000554991 BAZ1BQ9UIG0 1483 aaKnown RBP16.24■□□□□ 0.19
STRN3-205ENST00000554991 WIZO95785 1651 aa16.18■□□□□ 0.18
STRN3-205ENST00000554991 ERCC6Q03468 1493 aa16.05■□□□□ 0.16
STRN3-205ENST00000554991 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
STRN3-205ENST00000554991 KIF21AQ7Z4S6 1674 aa16.03■□□□□ 0.16
STRN3-205ENST00000554991 NESP48681 1621 aa16■□□□□ 0.15
STRN3-205ENST00000554991 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
STRN3-205ENST00000554991 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
STRN3-205ENST00000554991 THOC2Q8NI27 1593 aaKnown RBP15.95■□□□□ 0.14
STRN3-205ENST00000554991 RSF1Q96T23 1441 aaPredicted RBP15.93■□□□□ 0.14
STRN3-205ENST00000554991 CUX2O14529 1486 aa15.91■□□□□ 0.14
STRN3-205ENST00000554991 PDS5BQ9NTI5 1447 aa15.81■□□□□ 0.12
STRN3-205ENST00000554991 CADPSQ9ULU8 1353 aa15.77■□□□□ 0.12
STRN3-205ENST00000554991 CEP164Q9UPV0 1460 aa15.75■□□□□ 0.11
STRN3-205ENST00000554991 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
STRN3-205ENST00000554991 WDR62O43379 1518 aa15.72■□□□□ 0.11
STRN3-205ENST00000554991 CFTRP13569 1480 aa15.7■□□□□ 0.1
STRN3-205ENST00000554991 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
STRN3-205ENST00000554991 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
STRN3-205ENST00000554991 URB2Q14146 1524 aaKnown RBP15.55■□□□□ 0.08
STRN3-205ENST00000554991 DNMBPQ6XZF7 1577 aa15.49■□□□□ 0.07
STRN3-205ENST00000554991 TOPBP1Q92547 1522 aa15.45■□□□□ 0.06
STRN3-205ENST00000554991 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
STRN3-205ENST00000554991 EIF4G3O43432 1585 aaKnown RBP15.4■□□□□ 0.06
STRN3-205ENST00000554991 SUPT5HO00267 1087 aaKnown RBP15.38■□□□□ 0.05
STRN3-205ENST00000554991 DNAJC5Q9H3Z4 198 aa15.38■□□□□ 0.05
STRN3-205ENST00000554991 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
STRN3-205ENST00000554991 AEBP2Q6ZN18 517 aaPredicted RBP15.35■□□□□ 0.05
STRN3-205ENST00000554991 TARBP1Q13395 1621 aaKnown RBP15.34■□□□□ 0.05
STRN3-205ENST00000554991 CHIC1Q5VXU3 224 aa15.33■□□□□ 0.04
STRN3-205ENST00000554991 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
STRN3-205ENST00000554991 CHD1O14646 1710 aa15.31■□□□□ 0.04
STRN3-205ENST00000554991 POLA1P09884 1462 aaPredicted RBP15.29■□□□□ 0.04
STRN3-205ENST00000554991 ZNF608Q9ULD9 1512 aaPredicted RBP15.28■□□□□ 0.04
STRN3-205ENST00000554991 PBRM1Q86U86 1689 aa15.28■□□□□ 0.04
STRN3-205ENST00000554991 CUX1P39880 1505 aa15.27■□□□□ 0.04
STRN3-205ENST00000554991 FGD5Q6ZNL6 1462 aa15.26■□□□□ 0.03
STRN3-205ENST00000554991 BIVM-ERCC5R4GMW8 1640 aa15.25■□□□□ 0.03
STRN3-205ENST00000554991 RAD54L2Q9Y4B4 1467 aa15.18■□□□□ 0.02
STRN3-205ENST00000554991 TOP2BQ02880 1626 aa15.17■□□□□ 0.02
STRN3-205ENST00000554991 ABCA5Q8WWZ7 1642 aa15.16■□□□□ 0.02
STRN3-205ENST00000554991 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
STRN3-205ENST00000554991 SOGA1O94964 1423 aa15.15■□□□□ 0.02
STRN3-205ENST00000554991 AQRO60306 1485 aaKnown RBP eCLIP15.13■□□□□ 0.01
STRN3-205ENST00000554991 SNAPC4Q5SXM2 1469 aa15.09■□□□□ 0.01
STRN3-205ENST00000554991 RIMBP3CA6NJZ7 1639 aa15.09■□□□□ 0.01
STRN3-205ENST00000554991 RIMBP3BA6NNM3 1639 aa15.09■□□□□ 0.01
STRN3-205ENST00000554991 RIMBP3Q9UFD9 1639 aa15.09■□□□□ 0.01
STRN3-205ENST00000554991 WRNQ14191 1432 aaPredicted RBP eCLIP15.09■□□□□ 0.01
STRN3-205ENST00000554991 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
STRN3-205ENST00000554991 MAGI1Q96QZ7 1491 aaPredicted RBP15.07■□□□□ 0
STRN3-205ENST00000554991 TDRD9Q8NDG6 1382 aaKnown RBP15.06■□□□□ 0
STRN3-205ENST00000554991 GRIN2BQ13224 1484 aa15.06■□□□□ 0
STRN3-205ENST00000554991 OSCARQ8IYS5 282 aa15.05■□□□□ -0
STRN3-205ENST00000554991 GAPVD1Q14C86 1478 aa15.03■□□□□ -0
STRN3-205ENST00000554991 ADAMTS12P58397 1594 aa15.02■□□□□ -0
STRN3-205ENST00000554991 ARHGEF11O15085 1522 aa15□□□□□ -0.01
STRN3-205ENST00000554991 SYNJ2O15056 1496 aa14.99□□□□□ -0.01
STRN3-205ENST00000554991 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
STRN3-205ENST00000554991 FBLN2P98095 1184 aa14.96□□□□□ -0.01
STRN3-205ENST00000554991 ERICH3Q5RHP9 1530 aa14.94□□□□□ -0.02
STRN3-205ENST00000554991 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
STRN3-205ENST00000554991 CUL7Q14999 1698 aa14.9□□□□□ -0.02
STRN3-205ENST00000554991 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
STRN3-205ENST00000554991 CHMP7Q8WUX9 453 aaPredicted RBP14.88□□□□□ -0.03
STRN3-205ENST00000554991 CEP170Q5SW79 1584 aa14.87□□□□□ -0.03
STRN3-205ENST00000554991 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.03
STRN3-205ENST00000554991 ARAP1Q96P48 1450 aa14.83□□□□□ -0.03
STRN3-205ENST00000554991 RUSC2Q8N2Y8 1516 aa14.82□□□□□ -0.04
STRN3-205ENST00000554991 SHROOM2Q13796 1616 aa14.82□□□□□ -0.04
STRN3-205ENST00000554991 KIF27Q86VH2 1401 aa14.78□□□□□ -0.04
STRN3-205ENST00000554991 NUP160Q12769 1436 aa14.77□□□□□ -0.04
STRN3-205ENST00000554991 ERCC6L2Q5T890 1561 aa14.73□□□□□ -0.05
STRN3-205ENST00000554991 CTTNBP2Q8WZ74 1663 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms