RNA–Protein interactions for RNA: ENST00000554890.1

KTN1-218, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-218ENST00000554890 KHSRPQ92945 711 aaKnown RBP eCLIP10.5□□□□□ -0.73
KTN1-218ENST00000554890 PHF8Q9UPP1 1060 aa10.47□□□□□ -0.73
KTN1-218ENST00000554890 ZNF316A6NFI3 1004 aaPredicted RBP10.46□□□□□ -0.73
KTN1-218ENST00000554890 LSM11P83369 360 aaKnown RBP eCLIP10.46□□□□□ -0.73
KTN1-218ENST00000554890 SOX12O15370 315 aa10.45□□□□□ -0.74
KTN1-218ENST00000554890 TRIM41Q8WV44 630 aa10.45□□□□□ -0.74
KTN1-218ENST00000554890 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.42□□□□□ -0.74
KTN1-218ENST00000554890 ZFP91Q96JP5 570 aaPredicted RBP10.42□□□□□ -0.74
KTN1-218ENST00000554890 RNF25Q96BH1 459 aaPredicted RBP10.41□□□□□ -0.74
KTN1-218ENST00000554890 RIOK3O14730 519 aaKnown RBP10.4□□□□□ -0.74
KTN1-218ENST00000554890 NUDT7P0C024 238 aa10.36□□□□□ -0.75
KTN1-218ENST00000554890 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
KTN1-218ENST00000554890 PLA2G2EQ9NZK7 142 aa10.35□□□□□ -0.75
KTN1-218ENST00000554890 VGFO15240 615 aaPredicted RBP10.34□□□□□ -0.75
KTN1-218ENST00000554890 POTEEQ6S8J3 1075 aa10.34□□□□□ -0.75
KTN1-218ENST00000554890 PBX2P40425 430 aa10.32□□□□□ -0.76
KTN1-218ENST00000554890 LHX6Q9UPM6 363 aa10.32□□□□□ -0.76
KTN1-218ENST00000554890 NLRP6P59044 892 aa10.31□□□□□ -0.76
KTN1-218ENST00000554890 FBXO22Q8NEZ5 403 aa10.31□□□□□ -0.76
KTN1-218ENST00000554890 C2orf72A6NCS6 295 aa10.29□□□□□ -0.76
KTN1-218ENST00000554890 KIF3CO14782 793 aa10.29□□□□□ -0.76
KTN1-218ENST00000554890 HCSTQ9UBK5 93 aa10.29□□□□□ -0.76
KTN1-218ENST00000554890 BCL11BQ9C0K0 894 aaPredicted RBP10.26□□□□□ -0.77
KTN1-218ENST00000554890 PCDHGA4Q9Y5G9 962 aa10.26□□□□□ -0.77
KTN1-218ENST00000554890 ADGRD1Q6QNK2 874 aa10.23□□□□□ -0.77
KTN1-218ENST00000554890 MFRPQ9BY79 579 aa10.23□□□□□ -0.77
KTN1-218ENST00000554890 STK24Q9Y6E0 443 aa10.21□□□□□ -0.77
KTN1-218ENST00000554890 SLC34A2O95436 690 aa10.2□□□□□ -0.78
KTN1-218ENST00000554890 ARHGAP33O14559 1287 aa10.19□□□□□ -0.78
KTN1-218ENST00000554890 TMC2Q8TDI7 906 aa10.16□□□□□ -0.78
KTN1-218ENST00000554890 DMRTA1Q5VZB9 504 aa10.15□□□□□ -0.78
KTN1-218ENST00000554890 PSEN2P49810 448 aa10.14□□□□□ -0.79
KTN1-218ENST00000554890 STK25O00506 426 aa10.13□□□□□ -0.79
KTN1-218ENST00000554890 HRO43593 1189 aa10.13□□□□□ -0.79
KTN1-218ENST00000554890 KCTD12Q96CX2 325 aaKnown RBP10.13□□□□□ -0.79
KTN1-218ENST00000554890 TK2O00142 265 aa10.11□□□□□ -0.79
KTN1-218ENST00000554890 TAOK2Q9UL54 1235 aa10.11□□□□□ -0.79
KTN1-218ENST00000554890 PSDA5PKW4 1024 aaPredicted RBP10.1□□□□□ -0.79
KTN1-218ENST00000554890 KDM4FA0A1W2PPD8 638 aa10.09□□□□□ -0.79
KTN1-218ENST00000554890 PPP1R37O75864 691 aa10.04□□□□□ -0.8
KTN1-218ENST00000554890 STAC3Q96MF2 364 aa10.04□□□□□ -0.8
KTN1-218ENST00000554890 PTCD2Q8WV60 388 aaKnown RBP10.03□□□□□ -0.8
KTN1-218ENST00000554890 PTPN5P54829 565 aa10.02□□□□□ -0.81
KTN1-218ENST00000554890 PPP4R3BQ5MIZ7 849 aa10.02□□□□□ -0.81
KTN1-218ENST00000554890 KCNK17Q96T54 332 aa10.02□□□□□ -0.81
KTN1-218ENST00000554890 PLPP6Q8IY26 295 aa9.98□□□□□ -0.81
KTN1-218ENST00000554890 AMER1Q5JTC6 1135 aaPredicted RBP9.97□□□□□ -0.81
KTN1-218ENST00000554890 VPS9D1Q9Y2B5 631 aa9.97□□□□□ -0.81
KTN1-218ENST00000554890 ECM2O94769 699 aaPredicted RBP9.96□□□□□ -0.82
KTN1-218ENST00000554890 IRX2Q9BZI1 471 aaPredicted RBP9.96□□□□□ -0.82
KTN1-218ENST00000554890 FOXK1P85037 733 aa9.95□□□□□ -0.82
KTN1-218ENST00000554890 RTN4Q9NQC3 1192 aaKnown RBP9.95□□□□□ -0.82
KTN1-218ENST00000554890 KCNH8Q96L42 1107 aa9.94□□□□□ -0.82
KTN1-218ENST00000554890 RGL2O15211 777 aa9.92□□□□□ -0.82
KTN1-218ENST00000554890 RGS20O76081 388 aa9.92□□□□□ -0.82
KTN1-218ENST00000554890 DSG2Q14126 1118 aa9.92□□□□□ -0.82
KTN1-218ENST00000554890 TBC1D12O60347 775 aa9.91□□□□□ -0.82
KTN1-218ENST00000554890 A0A0G2JS52 829 aa9.9□□□□□ -0.82
KTN1-218ENST00000554890 PKD2Q13563 968 aa9.9□□□□□ -0.82
KTN1-218ENST00000554890 IFFO2Q5TF58 517 aa9.9□□□□□ -0.82
KTN1-218ENST00000554890 THSD4Q6ZMP0 1018 aa9.9□□□□□ -0.82
KTN1-218ENST00000554890 GPHNQ9NQX3 736 aaPredicted RBP9.9□□□□□ -0.82
KTN1-218ENST00000554890 ZNF454Q8N9F8 522 aa9.88□□□□□ -0.83
KTN1-218ENST00000554890 BHMG1C9JSJ3 638 aaPredicted RBP9.85□□□□□ -0.83
KTN1-218ENST00000554890 UPF1Q92900 1129 aaKnown RBP eCLIP9.85□□□□□ -0.83
KTN1-218ENST00000554890 WNT2BQ93097 391 aa9.85□□□□□ -0.83
KTN1-218ENST00000554890 BCL2L12Q9HB09 334 aa9.85□□□□□ -0.83
KTN1-218ENST00000554890 GOLGA8CPA6NN73 597 aa9.84□□□□□ -0.83
KTN1-218ENST00000554890 SLC4A5Q9BY07 1137 aa9.83□□□□□ -0.84
KTN1-218ENST00000554890 OXER1Q8TDS5 423 aa9.82□□□□□ -0.84
KTN1-218ENST00000554890 MRPL50Q8N5N7 158 aaKnown RBP9.81□□□□□ -0.84
KTN1-218ENST00000554890 ZBED2Q9BTP6 218 aa9.81□□□□□ -0.84
KTN1-218ENST00000554890 PTPREP23469 700 aa9.79□□□□□ -0.84
KTN1-218ENST00000554890 FOSBP53539 338 aa9.78□□□□□ -0.84
KTN1-218ENST00000554890 Q6ZNB5 142 aa9.75□□□□□ -0.85
KTN1-218ENST00000554890 NBPF3Q9H094 633 aa9.74□□□□□ -0.85
KTN1-218ENST00000554890 ADAM33Q9BZ11 813 aa9.73□□□□□ -0.85
KTN1-218ENST00000554890 JPH4Q96JJ6 628 aa9.71□□□□□ -0.86
KTN1-218ENST00000554890 PPP1R15BQ5SWA1 713 aa9.7□□□□□ -0.86
KTN1-218ENST00000554890 ZDHHC16Q969W1 377 aa9.7□□□□□ -0.86
KTN1-218ENST00000554890 ITGBL1O95965 494 aaPredicted RBP9.69□□□□□ -0.86
KTN1-218ENST00000554890 DCAF8L2P0C7V8 631 aa9.69□□□□□ -0.86
KTN1-218ENST00000554890 CRISPLD2Q9H0B8 497 aa9.69□□□□□ -0.86
KTN1-218ENST00000554890 BCAMP50895 628 aa9.68□□□□□ -0.86
KTN1-218ENST00000554890 HS6ST3Q8IZP7 471 aa9.68□□□□□ -0.86
KTN1-218ENST00000554890 ANO8Q9HCE9 1232 aaPredicted RBP9.68□□□□□ -0.86
KTN1-218ENST00000554890 EVI5O60447 810 aa9.67□□□□□ -0.86
KTN1-218ENST00000554890 PROX2Q3B8N5 592 aa9.67□□□□□ -0.86
KTN1-218ENST00000554890 ANKK1Q8NFD2 765 aa9.67□□□□□ -0.86
KTN1-218ENST00000554890 RABGEF1Q9UJ41 708 aa9.63□□□□□ -0.87
KTN1-218ENST00000554890 NCKAP5LQ9HCH0 1330 aa9.62□□□□□ -0.87
KTN1-218ENST00000554890 PPP1R3GB7ZBB8 358 aa9.62□□□□□ -0.87
KTN1-218ENST00000554890 COL9A1P20849 921 aa9.62□□□□□ -0.87
KTN1-218ENST00000554890 SOWAHBA6NEL2 793 aa9.61□□□□□ -0.87
KTN1-218ENST00000554890 NKX1-1Q15270 411 aaPredicted RBP9.61□□□□□ -0.87
KTN1-218ENST00000554890 LCE2BO14633 110 aa9.6□□□□□ -0.87
KTN1-218ENST00000554890 CHGAP10645 457 aaKnown RBP9.6□□□□□ -0.87
KTN1-218ENST00000554890 WBP1LQ9NX94 342 aa9.6□□□□□ -0.87
KTN1-218ENST00000554890 KCNC4Q03721 635 aa9.58□□□□□ -0.88
KTN1-218ENST00000554890 PCDHGA10Q9Y5H3 936 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms