RNA–Protein interactions for RNA: ENST00000554570.1

KTN1-216, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-216ENST00000554570 C2orf72A6NCS6 295 aa11.95□□□□□ -0.5
KTN1-216ENST00000554570 TMC2Q8TDI7 906 aa11.95□□□□□ -0.5
KTN1-216ENST00000554570 CRISPLD2Q9H0B8 497 aa11.95□□□□□ -0.5
KTN1-216ENST00000554570 GPHNQ9NQX3 736 aaPredicted RBP11.95□□□□□ -0.5
KTN1-216ENST00000554570 SNPHO15079 494 aa11.94□□□□□ -0.5
KTN1-216ENST00000554570 PLCB2Q00722 1185 aa11.94□□□□□ -0.5
KTN1-216ENST00000554570 PDE4AP27815 886 aa11.91□□□□□ -0.5
KTN1-216ENST00000554570 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
KTN1-216ENST00000554570 FOXK1P85037 733 aa11.9□□□□□ -0.5
KTN1-216ENST00000554570 CADPS2Q86UW7 1296 aa11.9□□□□□ -0.5
KTN1-216ENST00000554570 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
KTN1-216ENST00000554570 DOK7Q18PE1 504 aa11.85□□□□□ -0.51
KTN1-216ENST00000554570 DSG2Q14126 1118 aa11.84□□□□□ -0.51
KTN1-216ENST00000554570 MFSD10Q14728 455 aa11.84□□□□□ -0.51
KTN1-216ENST00000554570 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.52
KTN1-216ENST00000554570 SLC34A2O95436 690 aa11.82□□□□□ -0.52
KTN1-216ENST00000554570 PLPP6Q8IY26 295 aa11.82□□□□□ -0.52
KTN1-216ENST00000554570 TSHZ2Q9NRE2 1034 aa11.82□□□□□ -0.52
KTN1-216ENST00000554570 FAM163AQ96GL9 167 aaPredicted RBP11.81□□□□□ -0.52
KTN1-216ENST00000554570 DDX27Q96GQ7 796 aaKnown RBP11.81□□□□□ -0.52
KTN1-216ENST00000554570 PPP1R15BQ5SWA1 713 aa11.8□□□□□ -0.52
KTN1-216ENST00000554570 LCE2DQ5TA82 110 aaPredicted RBP11.8□□□□□ -0.52
KTN1-216ENST00000554570 ZSWIM6Q9HCJ5 1215 aa11.8□□□□□ -0.52
KTN1-216ENST00000554570 RIMBP2O15034 1052 aa11.79□□□□□ -0.52
KTN1-216ENST00000554570 ST18O60284 1047 aa11.79□□□□□ -0.52
KTN1-216ENST00000554570 ZNF710Q8N1W2 664 aa11.77□□□□□ -0.53
KTN1-216ENST00000554570 PTCD2Q8WV60 388 aaKnown RBP11.74□□□□□ -0.53
KTN1-216ENST00000554570 HOXB1P14653 301 aaPredicted RBP11.73□□□□□ -0.53
KTN1-216ENST00000554570 GPR153Q6NV75 609 aa11.73□□□□□ -0.53
KTN1-216ENST00000554570 CAMK2BQ13554 666 aa11.71□□□□□ -0.53
KTN1-216ENST00000554570 HAP1P54257 671 aaPredicted RBP11.69□□□□□ -0.54
KTN1-216ENST00000554570 OXER1Q8TDS5 423 aa11.69□□□□□ -0.54
KTN1-216ENST00000554570 WDR70Q9NW82 654 aa11.69□□□□□ -0.54
KTN1-216ENST00000554570 PCDHGA4Q9Y5G9 962 aa11.69□□□□□ -0.54
KTN1-216ENST00000554570 ARSIQ5FYB1 569 aa11.67□□□□□ -0.54
KTN1-216ENST00000554570 TBC1D12O60347 775 aa11.66□□□□□ -0.54
KTN1-216ENST00000554570 EMILIN3Q9NT22 766 aa11.65□□□□□ -0.54
KTN1-216ENST00000554570 KDM4FA0A1W2PPD8 638 aa11.63□□□□□ -0.55
KTN1-216ENST00000554570 E2F4Q16254 413 aa11.63□□□□□ -0.55
KTN1-216ENST00000554570 POTEMA6NI47 508 aa11.62□□□□□ -0.55
KTN1-216ENST00000554570 POTEGQ6S5H5 508 aa11.62□□□□□ -0.55
KTN1-216ENST00000554570 MARVELD3Q96A59 401 aa11.62□□□□□ -0.55
KTN1-216ENST00000554570 EMP3P54852 163 aa11.61□□□□□ -0.55
KTN1-216ENST00000554570 UPF1Q92900 1129 aaKnown RBP eCLIP11.61□□□□□ -0.55
KTN1-216ENST00000554570 KHSRPQ92945 711 aaKnown RBP eCLIP11.61□□□□□ -0.552e-8■□□□□ 11.1
KTN1-216ENST00000554570 ARIH1Q9Y4X5 557 aaPredicted RBP11.61□□□□□ -0.55
KTN1-216ENST00000554570 NUDT7P0C024 238 aa11.59□□□□□ -0.55
KTN1-216ENST00000554570 VSIG10Q8N0Z9 540 aa11.59□□□□□ -0.55
KTN1-216ENST00000554570 MAP3K9P80192 1104 aa11.58□□□□□ -0.56
KTN1-216ENST00000554570 KDM2AQ9Y2K7 1162 aa11.57□□□□□ -0.56
KTN1-216ENST00000554570 ANO8Q9HCE9 1232 aaPredicted RBP11.56□□□□□ -0.56
KTN1-216ENST00000554570 ZNF316A6NFI3 1004 aaPredicted RBP11.55□□□□□ -0.56
KTN1-216ENST00000554570 FAM205CA6NFA0 338 aa11.54□□□□□ -0.56
KTN1-216ENST00000554570 ERBB3P21860 1342 aa11.54□□□□□ -0.56
KTN1-216ENST00000554570 EVI5O60447 810 aa11.53□□□□□ -0.56
KTN1-216ENST00000554570 HS3ST6Q96QI5 342 aa11.53□□□□□ -0.56
KTN1-216ENST00000554570 LHX6Q9UPM6 363 aa11.53□□□□□ -0.56
KTN1-216ENST00000554570 DPYSL4O14531 572 aa11.52□□□□□ -0.57
KTN1-216ENST00000554570 POTEB3A0JP26 581 aa11.51□□□□□ -0.57
KTN1-216ENST00000554570 PSDA5PKW4 1024 aaPredicted RBP11.51□□□□□ -0.57
KTN1-216ENST00000554570 POTEBQ6S5H4 581 aa11.51□□□□□ -0.57
KTN1-216ENST00000554570 P3H3Q8IVL6 736 aa11.51□□□□□ -0.57
KTN1-216ENST00000554570 VARS2Q5ST30 1063 aaKnown RBP11.5□□□□□ -0.57
KTN1-216ENST00000554570 ARHGEF1Q92888 912 aaKnown RBP11.5□□□□□ -0.57
KTN1-216ENST00000554570 SPDYE16A6NNV3 312 aaPredicted RBP11.49□□□□□ -0.57
KTN1-216ENST00000554570 PDIA6Q15084 440 aa11.49□□□□□ -0.57
KTN1-216ENST00000554570 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
KTN1-216ENST00000554570 PCDH10Q9P2E7 1040 aa11.49□□□□□ -0.57
KTN1-216ENST00000554570 PTGER2P43116 358 aa11.46□□□□□ -0.57
KTN1-216ENST00000554570 ZNF687Q8N1G0 1237 aa11.45□□□□□ -0.58
KTN1-216ENST00000554570 CDAN1Q8IWY9 1227 aa11.43□□□□□ -0.58
KTN1-216ENST00000554570 JPH4Q96JJ6 628 aa11.43□□□□□ -0.58
KTN1-216ENST00000554570 FOSBP53539 338 aa11.42□□□□□ -0.58
KTN1-216ENST00000554570 PPP4R3BQ5MIZ7 849 aa11.41□□□□□ -0.58
KTN1-216ENST00000554570 PHF14O94880 888 aa11.39□□□□□ -0.59
KTN1-216ENST00000554570 ZNF454Q8N9F8 522 aa11.39□□□□□ -0.59
KTN1-216ENST00000554570 PCDHGA10Q9Y5H3 936 aa11.38□□□□□ -0.59
KTN1-216ENST00000554570 PBX2P40425 430 aa11.37□□□□□ -0.59
KTN1-216ENST00000554570 ZDHHC16Q969W1 377 aa11.36□□□□□ -0.59
KTN1-216ENST00000554570 EPAS1Q99814 870 aa11.36□□□□□ -0.59
KTN1-216ENST00000554570 FBXW7Q969H0 707 aa11.35□□□□□ -0.59
KTN1-216ENST00000554570 KRTAP3-3Q9BYR6 98 aa11.35□□□□□ -0.59
KTN1-216ENST00000554570 KRTAP3-2Q9BYR7 98 aa11.35□□□□□ -0.59
KTN1-216ENST00000554570 SLC24A1O60721 1099 aa11.34□□□□□ -0.59
KTN1-216ENST00000554570 TYW1BQ6NUM6 668 aa11.34□□□□□ -0.59
KTN1-216ENST00000554570 BCL2L12Q9HB09 334 aa11.34□□□□□ -0.59
KTN1-216ENST00000554570 POTEEQ6S8J3 1075 aa11.33□□□□□ -0.6
KTN1-216ENST00000554570 DDX12PQ92771 950 aa11.33□□□□□ -0.6
KTN1-216ENST00000554570 ARHGAP33O14559 1287 aa11.32□□□□□ -0.6
KTN1-216ENST00000554570 ADAM33Q9BZ11 813 aa11.3□□□□□ -0.6
KTN1-216ENST00000554570 GRXCR2A6NFK2 248 aa11.27□□□□□ -0.61
KTN1-216ENST00000554570 NBR1Q14596 966 aa11.27□□□□□ -0.61
KTN1-216ENST00000554570 AXIN2Q9Y2T1 843 aa11.27□□□□□ -0.61
KTN1-216ENST00000554570 SEMA3EO15041 775 aa11.26□□□□□ -0.61
KTN1-216ENST00000554570 OSBPP22059 807 aa11.26□□□□□ -0.61
KTN1-216ENST00000554570 PTPREP23469 700 aa11.26□□□□□ -0.61
KTN1-216ENST00000554570 EN1Q05925 392 aaPredicted RBP11.26□□□□□ -0.61
KTN1-216ENST00000554570 KCNH8Q96L42 1107 aa11.26□□□□□ -0.61
KTN1-216ENST00000554570 MLLT3P42568 568 aaPredicted RBP11.25□□□□□ -0.61
KTN1-216ENST00000554570 LSM11P83369 360 aaKnown RBP eCLIP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms