RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 ZFYVE16Q7Z3T8 1539 aa11.18□□□□□ -0.62
PCNX4-208ENST00000554534 CERKQ8TCT0 537 aa11.17□□□□□ -0.62
PCNX4-208ENST00000554534 FER1L4A9Z1Z3 1794 aa11.16□□□□□ -0.62
PCNX4-208ENST00000554534 KIF14Q15058 1648 aa11.15□□□□□ -0.62
PCNX4-208ENST00000554534 EFCAB2Q5VUJ9 269 aa11.14□□□□□ -0.63
PCNX4-208ENST00000554534 PLCH2O75038 1416 aa11.14□□□□□ -0.63
PCNX4-208ENST00000554534 POGZQ7Z3K3 1410 aa11.14□□□□□ -0.63
PCNX4-208ENST00000554534 CFAP74Q9C0B2 1584 aa11.13□□□□□ -0.63
PCNX4-208ENST00000554534 LRRIQ1Q96JM4 1722 aa11.12□□□□□ -0.63
PCNX4-208ENST00000554534 EFCAB5A4FU69 1503 aa11.12□□□□□ -0.63
PCNX4-208ENST00000554534 ZMYM4Q5VZL5 1548 aa11.12□□□□□ -0.63
PCNX4-208ENST00000554534 ATP10AO60312 1499 aa11.12□□□□□ -0.63
PCNX4-208ENST00000554534 EEA1Q15075 1411 aa11.11□□□□□ -0.63
PCNX4-208ENST00000554534 ILDR2Q71H61 639 aa11.11□□□□□ -0.63
PCNX4-208ENST00000554534 MYO5CQ9NQX4 1742 aa11.11□□□□□ -0.63
PCNX4-208ENST00000554534 ARHGAP35Q9NRY4 1499 aa11.11□□□□□ -0.63
PCNX4-208ENST00000554534 ZNF777Q9ULD5 760 aaPredicted RBP11.09□□□□□ -0.63
PCNX4-208ENST00000554534 ARHGAP5Q13017 1502 aa11.09□□□□□ -0.63
PCNX4-208ENST00000554534 STRCQ7RTU9 1775 aa11.08□□□□□ -0.64
PCNX4-208ENST00000554534 ARHGEF12Q9NZN5 1544 aa11.08□□□□□ -0.64
PCNX4-208ENST00000554534 C9orf84Q5VXU9 1444 aa11.08□□□□□ -0.64
PCNX4-208ENST00000554534 MAGI2Q86UL8 1455 aa11.07□□□□□ -0.64
PCNX4-208ENST00000554534 CDK11AQ9UQ88 783 aaPredicted RBP11.07□□□□□ -0.64
PCNX4-208ENST00000554534 CDC42BPBQ9Y5S2 1711 aa11.06□□□□□ -0.64
PCNX4-208ENST00000554534 PREX1Q8TCU6 1659 aa11.06□□□□□ -0.64
PCNX4-208ENST00000554534 TRAPPC8Q9Y2L5 1435 aa11.06□□□□□ -0.64
PCNX4-208ENST00000554534 DISP3Q9P2K9 1392 aa11.05□□□□□ -0.64
PCNX4-208ENST00000554534 TROQ12816 1431 aaPredicted RBP11.04□□□□□ -0.64
PCNX4-208ENST00000554534 FMN1Q68DA7 1419 aa11.04□□□□□ -0.64
PCNX4-208ENST00000554534 HNRNPMP52272 730 aaKnown RBP eCLIP11.04□□□□□ -0.64
PCNX4-208ENST00000554534 ESF1Q9H501 851 aaKnown RBP11.04□□□□□ -0.64
PCNX4-208ENST00000554534 ABCA6Q8N139 1617 aa11.04□□□□□ -0.64
PCNX4-208ENST00000554534 DIP2CQ9Y2E4 1556 aa11.03□□□□□ -0.64
PCNX4-208ENST00000554534 C3P01024 1663 aa11.03□□□□□ -0.64
PCNX4-208ENST00000554534 NCKAP5LQ9HCH0 1330 aa11.02□□□□□ -0.65
PCNX4-208ENST00000554534 UHRF1BP1Q6BDS2 1440 aa11.01□□□□□ -0.65
PCNX4-208ENST00000554534 ZNF518AQ6AHZ1 1483 aa11.01□□□□□ -0.65
PCNX4-208ENST00000554534 CLIP1P30622 1438 aa11□□□□□ -0.65
PCNX4-208ENST00000554534 SETD1BQ9UPS6 1966 aaKnown RBP10.99□□□□□ -0.65
PCNX4-208ENST00000554534 KDM5CP41229 1560 aa10.99□□□□□ -0.65
PCNX4-208ENST00000554534 SUPT6HQ7KZ85 1726 aaKnown RBP10.99□□□□□ -0.65
PCNX4-208ENST00000554534 DMRT2Q9Y5R5 561 aa10.99□□□□□ -0.65
PCNX4-208ENST00000554534 ITSN2Q9NZM3 1697 aa10.98□□□□□ -0.65
PCNX4-208ENST00000554534 CDC42BPAQ5VT25 1732 aa10.98□□□□□ -0.65
PCNX4-208ENST00000554534 KIDINS220Q9ULH0 1771 aa10.98□□□□□ -0.65
PCNX4-208ENST00000554534 GGT6Q6P531 493 aa10.97□□□□□ -0.65
PCNX4-208ENST00000554534 PREX2Q70Z35 1606 aa10.97□□□□□ -0.65
PCNX4-208ENST00000554534 ABCC1P33527 1531 aa10.96□□□□□ -0.65
PCNX4-208ENST00000554534 MLH3Q9UHC1 1453 aa10.96□□□□□ -0.65
PCNX4-208ENST00000554534 ZNF644Q9H582 1327 aaPredicted RBP10.96□□□□□ -0.65
PCNX4-208ENST00000554534 SPAG9O60271 1321 aaKnown RBP10.95□□□□□ -0.66
PCNX4-208ENST00000554534 ZNF335Q9H4Z2 1342 aaPredicted RBP10.95□□□□□ -0.66
PCNX4-208ENST00000554534 CASKIN1Q8WXD9 1431 aa10.94□□□□□ -0.66
PCNX4-208ENST00000554534 ZMYM3Q14202 1370 aa10.94□□□□□ -0.66
PCNX4-208ENST00000554534 CLTCQ00610 1675 aaKnown RBP10.94□□□□□ -0.66
PCNX4-208ENST00000554534 CAMSAP1Q5T5Y3 1602 aa10.94□□□□□ -0.66
PCNX4-208ENST00000554534 LTBP4Q8N2S1 1624 aa10.94□□□□□ -0.66
PCNX4-208ENST00000554534 SAMD9LQ8IVG5 1584 aa10.94□□□□□ -0.66
PCNX4-208ENST00000554534 SENP3Q9H4L4 574 aaPredicted RBP10.93□□□□□ -0.66
PCNX4-208ENST00000554534 SYCP2Q9BX26 1530 aa10.93□□□□□ -0.66
PCNX4-208ENST00000554534 PTPRTO14522 1441 aa10.92□□□□□ -0.66
PCNX4-208ENST00000554534 UBAP1LF5GYI3 381 aa10.92□□□□□ -0.66
PCNX4-208ENST00000554534 SOCS7O14512 581 aa10.92□□□□□ -0.66
PCNX4-208ENST00000554534 CFDP1Q9UEE9 299 aaPredicted RBP10.92□□□□□ -0.66
PCNX4-208ENST00000554534 GPATCH8Q9UKJ3 1502 aaKnown RBP10.92□□□□□ -0.66
PCNX4-208ENST00000554534 REREQ9P2R6 1566 aa10.91□□□□□ -0.66
PCNX4-208ENST00000554534 AGLP35573 1532 aa10.91□□□□□ -0.66
PCNX4-208ENST00000554534 NCOA1Q15788 1441 aa10.91□□□□□ -0.66
PCNX4-208ENST00000554534 SCAF1Q9H7N4 1312 aaKnown RBP10.9□□□□□ -0.66
PCNX4-208ENST00000554534 FBXO31Q5XUX0 539 aaPredicted RBP10.9□□□□□ -0.66
PCNX4-208ENST00000554534 CCDC18Q5T9S5 1454 aa10.89□□□□□ -0.67
PCNX4-208ENST00000554534 SPATA31D1Q6ZQQ2 1576 aa10.89□□□□□ -0.67
PCNX4-208ENST00000554534 PIP4K2BP78356 416 aa10.88□□□□□ -0.67
PCNX4-208ENST00000554534 CCNB3Q8WWL7 1395 aa10.88□□□□□ -0.67
PCNX4-208ENST00000554534 ATP7AQ04656 1500 aa10.87□□□□□ -0.67
PCNX4-208ENST00000554534 A2MP01023 1474 aa10.86□□□□□ -0.67
PCNX4-208ENST00000554534 FYCO1Q9BQS8 1478 aa10.86□□□□□ -0.67
PCNX4-208ENST00000554534 PTPRKQ15262 1439 aa10.85□□□□□ -0.67
PCNX4-208ENST00000554534 CNTLNQ9NXG0 1405 aa10.85□□□□□ -0.67
PCNX4-208ENST00000554534 MYO3AQ8NEV4 1616 aa10.84□□□□□ -0.67
PCNX4-208ENST00000554534 KIF3BO15066 747 aa10.84□□□□□ -0.67
PCNX4-208ENST00000554534 MTUS2Q5JR59 1369 aa10.84□□□□□ -0.67
PCNX4-208ENST00000554534 MROH2AA6NES4 1674 aa10.84□□□□□ -0.67
PCNX4-208ENST00000554534 INO80Q9ULG1 1556 aaPredicted RBP10.83□□□□□ -0.68
PCNX4-208ENST00000554534 HSPA1LP34931 641 aa10.83□□□□□ -0.68
PCNX4-208ENST00000554534 PPP6R1Q9UPN7 881 aa10.83□□□□□ -0.68
PCNX4-208ENST00000554534 NPATQ14207 1427 aa10.83□□□□□ -0.68
PCNX4-208ENST00000554534 CEP170BQ9Y4F5 1589 aaPredicted RBP10.82□□□□□ -0.68
PCNX4-208ENST00000554534 PKD2Q13563 968 aa10.81□□□□□ -0.68
PCNX4-208ENST00000554534 PLXNC1O60486 1568 aa10.81□□□□□ -0.68
PCNX4-208ENST00000554534 CFAP65Q6ZU64 1925 aaKnown RBP10.8□□□□□ -0.68
PCNX4-208ENST00000554534 KIAA1107Q9UPP5 1409 aa10.8□□□□□ -0.68
PCNX4-208ENST00000554534 TIAM1Q13009 1591 aa10.8□□□□□ -0.68
PCNX4-208ENST00000554534 DNMT1P26358 1616 aaKnown RBP10.8□□□□□ -0.68
PCNX4-208ENST00000554534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.79□□□□□ -0.68
PCNX4-208ENST00000554534 MBD5Q9P267 1494 aa10.79□□□□□ -0.68
PCNX4-208ENST00000554534 WASHC2CQ9Y4E1 1318 aa10.79□□□□□ -0.68
PCNX4-208ENST00000554534 ZNF142P52746 1687 aaPredicted RBP10.79□□□□□ -0.68
PCNX4-208ENST00000554534 ADGBQ8N7X0 1667 aa10.79□□□□□ -0.68
PCNX4-208ENST00000554534 TCOF1Q13428 1488 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms