RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 MYO5CQ9NQX4 1742 aa17.92■□□□□ 0.46
ABCD4-221ENST00000554453 POGZQ7Z3K3 1410 aa17.92■□□□□ 0.46
ABCD4-221ENST00000554453 PTPRMP28827 1452 aa17.92■□□□□ 0.46
ABCD4-221ENST00000554453 FYCO1Q9BQS8 1478 aa17.9■□□□□ 0.46
ABCD4-221ENST00000554453 BCORL1Q5H9F3 1711 aa17.9■□□□□ 0.46
ABCD4-221ENST00000554453 ARHGEF40Q8TER5 1519 aa17.9■□□□□ 0.46
ABCD4-221ENST00000554453 PCF11O94913 1555 aaKnown RBP17.9■□□□□ 0.46
ABCD4-221ENST00000554453 ZFYVE16Q7Z3T8 1539 aa17.89■□□□□ 0.45
ABCD4-221ENST00000554453 ATP10AO60312 1499 aa17.88■□□□□ 0.45
ABCD4-221ENST00000554453 ARHGAP5Q13017 1502 aa17.88■□□□□ 0.45
ABCD4-221ENST00000554453 HECW2Q9P2P5 1572 aa17.87■□□□□ 0.45
ABCD4-221ENST00000554453 MLECQ14165 292 aa17.86■□□□□ 0.45
ABCD4-221ENST00000554453 CDC42BPBQ9Y5S2 1711 aa17.86■□□□□ 0.45
ABCD4-221ENST00000554453 ZNF518AQ6AHZ1 1483 aa17.85■□□□□ 0.45
ABCD4-221ENST00000554453 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
ABCD4-221ENST00000554453 LOC105371045A0A1W2PR82 267 aa17.83■□□□□ 0.44
ABCD4-221ENST00000554453 ZNF777Q9ULD5 760 aaPredicted RBP17.82■□□□□ 0.44
ABCD4-221ENST00000554453 MADDQ8WXG6 1647 aa17.82■□□□□ 0.44
ABCD4-221ENST00000554453 C9orf84Q5VXU9 1444 aa17.81■□□□□ 0.44
ABCD4-221ENST00000554453 TRAPPC8Q9Y2L5 1435 aa17.81■□□□□ 0.44
ABCD4-221ENST00000554453 ARHGEF12Q9NZN5 1544 aa17.81■□□□□ 0.44
ABCD4-221ENST00000554453 CFDP1Q9UEE9 299 aaPredicted RBP17.8■□□□□ 0.44
ABCD4-221ENST00000554453 GPATCH8Q9UKJ3 1502 aaKnown RBP17.8■□□□□ 0.44
ABCD4-221ENST00000554453 MLH3Q9UHC1 1453 aa17.8■□□□□ 0.44
ABCD4-221ENST00000554453 CEP162Q5TB80 1403 aa17.8■□□□□ 0.44
ABCD4-221ENST00000554453 MTUS2Q5JR59 1369 aa17.79■□□□□ 0.44
ABCD4-221ENST00000554453 KDM5CP41229 1560 aa17.79■□□□□ 0.44
ABCD4-221ENST00000554453 SIGLEC1Q9BZZ2 1709 aa17.79■□□□□ 0.44
ABCD4-221ENST00000554453 HNRNPMP52272 730 aaKnown RBP eCLIP17.79■□□□□ 0.44
ABCD4-221ENST00000554453 PREX2Q70Z35 1606 aa17.78■□□□□ 0.44
ABCD4-221ENST00000554453 CDC42BPAQ5VT25 1732 aa17.77■□□□□ 0.44
ABCD4-221ENST00000554453 CCNB3Q8WWL7 1395 aa17.77■□□□□ 0.43
ABCD4-221ENST00000554453 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
ABCD4-221ENST00000554453 RIMS1Q86UR5 1692 aaKnown RBP17.76■□□□□ 0.43
ABCD4-221ENST00000554453 ABCC1P33527 1531 aa17.75■□□□□ 0.43
ABCD4-221ENST00000554453 KIAA1107Q9UPP5 1409 aa17.74■□□□□ 0.43
ABCD4-221ENST00000554453 SETD1BQ9UPS6 1966 aaKnown RBP17.74■□□□□ 0.43
ABCD4-221ENST00000554453 SPAG9O60271 1321 aaKnown RBP17.72■□□□□ 0.43
ABCD4-221ENST00000554453 CEBPAP49715 358 aaPredicted RBP17.72■□□□□ 0.43
ABCD4-221ENST00000554453 ILDR1Q86SU0 546 aaPredicted RBP17.71■□□□□ 0.43
ABCD4-221ENST00000554453 DIP2CQ9Y2E4 1556 aa17.7■□□□□ 0.42
ABCD4-221ENST00000554453 PLEKHH2Q8IVE3 1493 aa17.7■□□□□ 0.42
ABCD4-221ENST00000554453 ITSN2Q9NZM3 1697 aa17.7■□□□□ 0.42
ABCD4-221ENST00000554453 REREQ9P2R6 1566 aa17.7■□□□□ 0.42
ABCD4-221ENST00000554453 LMTK3Q96Q04 1460 aa17.69■□□□□ 0.42
ABCD4-221ENST00000554453 AGLP35573 1532 aa17.69■□□□□ 0.42
ABCD4-221ENST00000554453 SAMD9LQ8IVG5 1584 aa17.69■□□□□ 0.42
ABCD4-221ENST00000554453 ZNF644Q9H582 1327 aaPredicted RBP17.69■□□□□ 0.42
ABCD4-221ENST00000554453 KIDINS220Q9ULH0 1771 aa17.68■□□□□ 0.42
ABCD4-221ENST00000554453 HSPA2P54652 639 aa17.68■□□□□ 0.42
ABCD4-221ENST00000554453 FER1L4A9Z1Z3 1794 aa17.68■□□□□ 0.42
ABCD4-221ENST00000554453 ESF1Q9H501 851 aaKnown RBP17.67■□□□□ 0.42
ABCD4-221ENST00000554453 ABCA6Q8N139 1617 aa17.66■□□□□ 0.42
ABCD4-221ENST00000554453 RSPH4AQ5TD94 716 aa17.65■□□□□ 0.42
ABCD4-221ENST00000554453 SYCP2Q9BX26 1530 aa17.65■□□□□ 0.42
ABCD4-221ENST00000554453 EHBP1L1Q8N3D4 1523 aa17.64■□□□□ 0.41
ABCD4-221ENST00000554453 VPS8Q8N3P4 1428 aa17.62■□□□□ 0.41
ABCD4-221ENST00000554453 MBD5Q9P267 1494 aa17.62■□□□□ 0.41
ABCD4-221ENST00000554453 PPP6R1Q9UPN7 881 aa17.6■□□□□ 0.41
ABCD4-221ENST00000554453 TIAM1Q13009 1591 aa17.6■□□□□ 0.41
ABCD4-221ENST00000554453 NCOA2Q15596 1464 aa17.59■□□□□ 0.41
ABCD4-221ENST00000554453 RTEL1-TNFRSF6BF6WH68 1400 aa17.58■□□□□ 0.41
ABCD4-221ENST00000554453 CNTLNQ9NXG0 1405 aa17.58■□□□□ 0.41
ABCD4-221ENST00000554453 KANK4Q5T7N3 995 aaPredicted RBP17.58■□□□□ 0.4
ABCD4-221ENST00000554453 ATP7AQ04656 1500 aa17.57■□□□□ 0.4
ABCD4-221ENST00000554453 A2MP01023 1474 aa17.57■□□□□ 0.4
ABCD4-221ENST00000554453 ZMYM3Q14202 1370 aa17.56■□□□□ 0.4
ABCD4-221ENST00000554453 GGT6Q6P531 493 aa17.56■□□□□ 0.4
ABCD4-221ENST00000554453 SUPT6HQ7KZ85 1726 aaKnown RBP17.55■□□□□ 0.4
ABCD4-221ENST00000554453 LRRC9Q6ZRR7 1453 aa17.55■□□□□ 0.4
ABCD4-221ENST00000554453 DHX29Q7Z478 1369 aaKnown RBP17.54■□□□□ 0.4
ABCD4-221ENST00000554453 MAP3K1Q13233 1512 aa17.54■□□□□ 0.4
ABCD4-221ENST00000554453 TSPY4P0CV99 314 aa17.54■□□□□ 0.4
ABCD4-221ENST00000554453 TSPY10P0CW01 314 aa17.54■□□□□ 0.4
ABCD4-221ENST00000554453 FBXO41Q8TF61 875 aa17.54■□□□□ 0.4
ABCD4-221ENST00000554453 DMRT2Q9Y5R5 561 aa17.54■□□□□ 0.4
ABCD4-221ENST00000554453 UHRF1BP1Q6BDS2 1440 aa17.53■□□□□ 0.4
ABCD4-221ENST00000554453 INO80Q9ULG1 1556 aaPredicted RBP17.53■□□□□ 0.4
ABCD4-221ENST00000554453 C3P01024 1663 aa17.52■□□□□ 0.39
ABCD4-221ENST00000554453 PREX1Q8TCU6 1659 aa17.52■□□□□ 0.39
ABCD4-221ENST00000554453 APLP2Q06481 763 aa17.5■□□□□ 0.39
ABCD4-221ENST00000554453 PLXNC1O60486 1568 aa17.49■□□□□ 0.39
ABCD4-221ENST00000554453 KIF3BO15066 747 aa17.49■□□□□ 0.39
ABCD4-221ENST00000554453 CAMSAP2Q08AD1 1489 aa17.49■□□□□ 0.39
ABCD4-221ENST00000554453 CCDC141Q6ZP82 1450 aa17.49■□□□□ 0.39
ABCD4-221ENST00000554453 NPATQ14207 1427 aa17.48■□□□□ 0.39
ABCD4-221ENST00000554453 ADGBQ8N7X0 1667 aa17.48■□□□□ 0.39
ABCD4-221ENST00000554453 MIA2Q96PC5 1412 aa17.46■□□□□ 0.39
ABCD4-221ENST00000554453 CERKQ8TCT0 537 aa17.45■□□□□ 0.38
ABCD4-221ENST00000554453 MROH2AA6NES4 1674 aa17.45■□□□□ 0.38
ABCD4-221ENST00000554453 ARHGEF5Q12774 1597 aa17.44■□□□□ 0.38
ABCD4-221ENST00000554453 STRCQ7RTU9 1775 aa17.43■□□□□ 0.38
ABCD4-221ENST00000554453 PTPRKQ15262 1439 aa17.43■□□□□ 0.38
ABCD4-221ENST00000554453 MYOM3Q5VTT5 1437 aa17.43■□□□□ 0.38
ABCD4-221ENST00000554453 PTPRTO14522 1441 aa17.4■□□□□ 0.38
ABCD4-221ENST00000554453 CLTCQ00610 1675 aaKnown RBP17.4■□□□□ 0.38
ABCD4-221ENST00000554453 WASHC2CQ9Y4E1 1318 aa17.4■□□□□ 0.38
ABCD4-221ENST00000554453 FBXO31Q5XUX0 539 aaPredicted RBP17.38■□□□□ 0.37
ABCD4-221ENST00000554453 NCOA1Q15788 1441 aa17.37■□□□□ 0.37
ABCD4-221ENST00000554453 PKD2Q13563 968 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms