RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 CLIP1P30622 1438 aa28.28■■■□□ 2.12
SEC23A-206ENST00000553970 SCAPERQ9BY12 1400 aa28.28■■■□□ 2.12
SEC23A-206ENST00000553970 KIF14Q15058 1648 aa28.28■■■□□ 2.12
SEC23A-206ENST00000553970 PCF11O94913 1555 aaKnown RBP28.24■■■□□ 2.11
SEC23A-206ENST00000553970 TROQ12816 1431 aaPredicted RBP28.24■■■□□ 2.11
SEC23A-206ENST00000553970 RIMS1Q86UR5 1692 aaKnown RBP28.23■■■□□ 2.11
SEC23A-206ENST00000553970 YEATS2Q9ULM3 1422 aa28.22■■■□□ 2.11
SEC23A-206ENST00000553970 ZNF518AQ6AHZ1 1483 aa28.18■■■□□ 2.1
SEC23A-206ENST00000553970 CCDC18Q5T9S5 1454 aa28.17■■■□□ 2.1
SEC23A-206ENST00000553970 ATP10AO60312 1499 aa28.16■■■□□ 2.1
SEC23A-206ENST00000553970 LMTK3Q96Q04 1460 aa28.16■■■□□ 2.1
SEC23A-206ENST00000553970 ARHGAP5Q13017 1502 aa28.16■■■□□ 2.1
SEC23A-206ENST00000553970 C9orf84Q5VXU9 1444 aa28.16■■■□□ 2.1
SEC23A-206ENST00000553970 FER1L4A9Z1Z3 1794 aa28.11■■■□□ 2.09
SEC23A-206ENST00000553970 CASKIN1Q8WXD9 1431 aa28.11■■■□□ 2.09
SEC23A-206ENST00000553970 KDM5CP41229 1560 aa28.08■■■□□ 2.09
SEC23A-206ENST00000553970 MLECQ14165 292 aa28.08■■■□□ 2.09
SEC23A-206ENST00000553970 SIGLEC1Q9BZZ2 1709 aa28.08■■■□□ 2.09
SEC23A-206ENST00000553970 FBXO41Q8TF61 875 aa28.07■■■□□ 2.08
SEC23A-206ENST00000553970 LRRIQ1Q96JM4 1722 aa28.06■■■□□ 2.08
SEC23A-206ENST00000553970 ARHGEF12Q9NZN5 1544 aa28.06■■■□□ 2.08
SEC23A-206ENST00000553970 MYT1LQ9UL68 1186 aa28.04■■■□□ 2.08
SEC23A-206ENST00000553970 FYCO1Q9BQS8 1478 aa28.02■■■□□ 2.08
SEC23A-206ENST00000553970 PLPPR3Q6T4P5 718 aa28.02■■■□□ 2.08
SEC23A-206ENST00000553970 PREX2Q70Z35 1606 aa28.02■■■□□ 2.08
SEC23A-206ENST00000553970 CDC42BPBQ9Y5S2 1711 aa28.01■■■□□ 2.07
SEC23A-206ENST00000553970 AFAP1Q8N556 730 aa28■■■□□ 2.07
SEC23A-206ENST00000553970 REREQ9P2R6 1566 aa27.99■■■□□ 2.07
SEC23A-206ENST00000553970 MLH3Q9UHC1 1453 aa27.99■■■□□ 2.07
SEC23A-206ENST00000553970 ABCC1P33527 1531 aa27.96■■■□□ 2.07
SEC23A-206ENST00000553970 DIP2CQ9Y2E4 1556 aa27.94■■■□□ 2.06
SEC23A-206ENST00000553970 HSPA2P54652 639 aa27.94■■■□□ 2.06
SEC23A-206ENST00000553970 PREX1Q8TCU6 1659 aa27.93■■■□□ 2.06
SEC23A-206ENST00000553970 ITSN2Q9NZM3 1697 aa27.91■■■□□ 2.06
SEC23A-206ENST00000553970 AGLP35573 1532 aa27.89■■■□□ 2.06
SEC23A-206ENST00000553970 ESF1Q9H501 851 aaKnown RBP27.89■■■□□ 2.06
SEC23A-206ENST00000553970 CDC42BPAQ5VT25 1732 aa27.89■■■□□ 2.05
SEC23A-206ENST00000553970 ABCA6Q8N139 1617 aa27.89■■■□□ 2.05
SEC23A-206ENST00000553970 TRAPPC8Q9Y2L5 1435 aa27.87■■■□□ 2.05
SEC23A-206ENST00000553970 SETD1BQ9UPS6 1966 aaKnown RBP27.86■■■□□ 2.05
SEC23A-206ENST00000553970 UHRF1BP1Q6BDS2 1440 aa27.84■■■□□ 2.05
SEC23A-206ENST00000553970 DMRT2Q9Y5R5 561 aa27.82■■■□□ 2.04
SEC23A-206ENST00000553970 CNTLNQ9NXG0 1405 aa27.81■■■□□ 2.04
SEC23A-206ENST00000553970 PLEKHH2Q8IVE3 1493 aa27.81■■■□□ 2.04
SEC23A-206ENST00000553970 CEBPAP49715 358 aaPredicted RBP27.8■■■□□ 2.04
SEC23A-206ENST00000553970 KIDINS220Q9ULH0 1771 aa27.8■■■□□ 2.04
SEC23A-206ENST00000553970 ZNF777Q9ULD5 760 aaPredicted RBP27.79■■■□□ 2.04
SEC23A-206ENST00000553970 GPATCH8Q9UKJ3 1502 aaKnown RBP27.78■■■□□ 2.04
SEC23A-206ENST00000553970 SAMD9LQ8IVG5 1584 aa27.77■■■□□ 2.04
SEC23A-206ENST00000553970 KIAA1107Q9UPP5 1409 aa27.76■■■□□ 2.04
SEC23A-206ENST00000553970 MTUS2Q5JR59 1369 aa27.76■■■□□ 2.03
SEC23A-206ENST00000553970 CCNB3Q8WWL7 1395 aa27.75■■■□□ 2.03
SEC23A-206ENST00000553970 SPAG9O60271 1321 aaKnown RBP27.75■■■□□ 2.03
SEC23A-206ENST00000553970 CFDP1Q9UEE9 299 aaPredicted RBP27.75■■■□□ 2.03
SEC23A-206ENST00000553970 SYCP2Q9BX26 1530 aa27.75■■■□□ 2.03
SEC23A-206ENST00000553970 C3P01024 1663 aa27.74■■■□□ 2.03
SEC23A-206ENST00000553970 CERKQ8TCT0 537 aa27.72■■■□□ 2.03
SEC23A-206ENST00000553970 ATP7AQ04656 1500 aa27.68■■■□□ 2.02
SEC23A-206ENST00000553970 HNRNPMP52272 730 aaKnown RBP eCLIP27.67■■■□□ 2.02
SEC23A-206ENST00000553970 MROH2AA6NES4 1674 aa27.67■■■□□ 2.02
SEC23A-206ENST00000553970 EHBP1L1Q8N3D4 1523 aa27.66■■■□□ 2.02
SEC23A-206ENST00000553970 NPATQ14207 1427 aa27.65■■■□□ 2.02
SEC23A-206ENST00000553970 INO80Q9ULG1 1556 aaPredicted RBP27.64■■■□□ 2.01
SEC23A-206ENST00000553970 STRCQ7RTU9 1775 aa27.63■■■□□ 2.01
SEC23A-206ENST00000553970 PTPRTO14522 1441 aa27.61■■■□□ 2.01
SEC23A-206ENST00000553970 A2MP01023 1474 aa27.61■■■□□ 2.01
SEC23A-206ENST00000553970 SUPT6HQ7KZ85 1726 aaKnown RBP27.6■■■□□ 2.01
SEC23A-206ENST00000553970 PLXNC1O60486 1568 aa27.6■■■□□ 2.01
SEC23A-206ENST00000553970 CEP162Q5TB80 1403 aa27.58■■■□□ 2.01
SEC23A-206ENST00000553970 PPP6R1Q9UPN7 881 aa27.58■■■□□ 2.01
SEC23A-206ENST00000553970 ZMYM3Q14202 1370 aa27.58■■■□□ 2.01
SEC23A-206ENST00000553970 TIAM1Q13009 1591 aa27.57■■■□□ 2
SEC23A-206ENST00000553970 ADGBQ8N7X0 1667 aa27.56■■■□□ 2
SEC23A-206ENST00000553970 RTEL1-TNFRSF6BF6WH68 1400 aa27.53■■■□□ 2
SEC23A-206ENST00000553970 NCOA1Q15788 1441 aa27.52■■■□□ 2
SEC23A-206ENST00000553970 CLTCQ00610 1675 aaKnown RBP27.49■■□□□ 1.99
SEC23A-206ENST00000553970 RSPH4AQ5TD94 716 aa27.49■■□□□ 1.99
SEC23A-206ENST00000553970 GGT6Q6P531 493 aa27.49■■□□□ 1.99
SEC23A-206ENST00000553970 MBD5Q9P267 1494 aa27.49■■□□□ 1.99
SEC23A-206ENST00000553970 CAMSAP1Q5T5Y3 1602 aa27.45■■□□□ 1.99
SEC23A-206ENST00000553970 ZNF644Q9H582 1327 aaPredicted RBP27.45■■□□□ 1.99
SEC23A-206ENST00000553970 CCDC141Q6ZP82 1450 aa27.44■■□□□ 1.98
SEC23A-206ENST00000553970 ZNF142P52746 1687 aaPredicted RBP27.43■■□□□ 1.98
SEC23A-206ENST00000553970 DHX29Q7Z478 1369 aaKnown RBP27.43■■□□□ 1.98
SEC23A-206ENST00000553970 NCOA2Q15596 1464 aa27.43■■□□□ 1.98
SEC23A-206ENST00000553970 IQSEC2Q5JU85 1478 aa27.43■■□□□ 1.98
SEC23A-206ENST00000553970 PTPRKQ15262 1439 aa27.41■■□□□ 1.98
SEC23A-206ENST00000553970 FAM135AQ9P2D6 1515 aa27.41■■□□□ 1.98
SEC23A-206ENST00000553970 MYO3AQ8NEV4 1616 aa27.41■■□□□ 1.98
SEC23A-206ENST00000553970 PLA2R1Q13018 1463 aa27.41■■□□□ 1.98
SEC23A-206ENST00000553970 PKD2Q13563 968 aa27.4■■□□□ 1.98
SEC23A-206ENST00000553970 CEP170BQ9Y4F5 1589 aaPredicted RBP27.39■■□□□ 1.97
SEC23A-206ENST00000553970 CAMSAP2Q08AD1 1489 aa27.38■■□□□ 1.97
SEC23A-206ENST00000553970 LTBP4Q8N2S1 1624 aa27.36■■□□□ 1.97
SEC23A-206ENST00000553970 TSPY4P0CV99 314 aa27.33■■□□□ 1.97
SEC23A-206ENST00000553970 TSPY10P0CW01 314 aa27.33■■□□□ 1.97
SEC23A-206ENST00000553970 ARHGEF5Q12774 1597 aa27.33■■□□□ 1.97
SEC23A-206ENST00000553970 VPS8Q8N3P4 1428 aa27.33■■□□□ 1.96
SEC23A-206ENST00000553970 KIF3BO15066 747 aa27.32■■□□□ 1.96
SEC23A-206ENST00000553970 KDM5DQ9BY66 1539 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms