RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 ARID4BQ4LE39 1312 aaPredicted RBP32.41■■■□□ 2.78
PRAF2-202ENST00000553851 POGZQ7Z3K3 1410 aa32.4■■■□□ 2.78
PRAF2-202ENST00000553851 ZMYM4Q5VZL5 1548 aa32.38■■■□□ 2.77
PRAF2-202ENST00000553851 ARHGEF40Q8TER5 1519 aa32.37■■■□□ 2.77
PRAF2-202ENST00000553851 MAGI2Q86UL8 1455 aa32.36■■■□□ 2.77
PRAF2-202ENST00000553851 YEATS2Q9ULM3 1422 aa32.35■■■□□ 2.77
PRAF2-202ENST00000553851 CDC42BPBQ9Y5S2 1711 aa32.33■■■□□ 2.77
PRAF2-202ENST00000553851 ZFYVE16Q7Z3T8 1539 aa32.33■■■□□ 2.77
PRAF2-202ENST00000553851 AFAP1Q8N556 730 aa32.3■■■□□ 2.76
PRAF2-202ENST00000553851 PREX2Q70Z35 1606 aa32.3■■■□□ 2.76
PRAF2-202ENST00000553851 MTUS2Q5JR59 1369 aa32.28■■■□□ 2.76
PRAF2-202ENST00000553851 ADAMTSL3P82987 1691 aa32.27■■■□□ 2.76
PRAF2-202ENST00000553851 ZNF518AQ6AHZ1 1483 aa32.27■■■□□ 2.76
PRAF2-202ENST00000553851 BCORL1Q5H9F3 1711 aa32.25■■■□□ 2.75
PRAF2-202ENST00000553851 CDC42BPAQ5VT25 1732 aa32.23■■■□□ 2.75
PRAF2-202ENST00000553851 MYT1LQ9UL68 1186 aa32.23■■■□□ 2.75
PRAF2-202ENST00000553851 ZNF777Q9ULD5 760 aaPredicted RBP32.23■■■□□ 2.75
PRAF2-202ENST00000553851 GPATCH8Q9UKJ3 1502 aaKnown RBP32.22■■■□□ 2.75
PRAF2-202ENST00000553851 ATP10AO60312 1499 aa32.2■■■□□ 2.74
PRAF2-202ENST00000553851 ARHGEF12Q9NZN5 1544 aa32.2■■■□□ 2.74
PRAF2-202ENST00000553851 CCNB3Q8WWL7 1395 aa32.18■■■□□ 2.74
PRAF2-202ENST00000553851 TRAPPC8Q9Y2L5 1435 aa32.18■■■□□ 2.74
PRAF2-202ENST00000553851 PTPRMP28827 1452 aa32.18■■■□□ 2.74
PRAF2-202ENST00000553851 ABCC1P33527 1531 aa32.18■■■□□ 2.74
PRAF2-202ENST00000553851 KDM5CP41229 1560 aa32.18■■■□□ 2.74
PRAF2-202ENST00000553851 CFDP1Q9UEE9 299 aaPredicted RBP32.17■■■□□ 2.74
PRAF2-202ENST00000553851 MLECQ14165 292 aa32.15■■■□□ 2.74
PRAF2-202ENST00000553851 MADDQ8WXG6 1647 aa32.15■■■□□ 2.74
PRAF2-202ENST00000553851 SIGLEC1Q9BZZ2 1709 aa32.15■■■□□ 2.74
PRAF2-202ENST00000553851 C9orf84Q5VXU9 1444 aa32.14■■■□□ 2.74
PRAF2-202ENST00000553851 EHBP1L1Q8N3D4 1523 aa32.12■■■□□ 2.73
PRAF2-202ENST00000553851 VPS8Q8N3P4 1428 aa32.11■■■□□ 2.73
PRAF2-202ENST00000553851 ITSN2Q9NZM3 1697 aa32.11■■■□□ 2.73
PRAF2-202ENST00000553851 MLH3Q9UHC1 1453 aa32.11■■■□□ 2.73
PRAF2-202ENST00000553851 HECW2Q9P2P5 1572 aa32.1■■■□□ 2.73
PRAF2-202ENST00000553851 HNRNPMP52272 730 aaKnown RBP eCLIP32.1■■■□□ 2.73
PRAF2-202ENST00000553851 SAMD9LQ8IVG5 1584 aa32.09■■■□□ 2.73
PRAF2-202ENST00000553851 RIMS1Q86UR5 1692 aaKnown RBP32.05■■■□□ 2.72
PRAF2-202ENST00000553851 SYCP2Q9BX26 1530 aa32.04■■■□□ 2.72
PRAF2-202ENST00000553851 DIP2CQ9Y2E4 1556 aa32.04■■■□□ 2.72
PRAF2-202ENST00000553851 KIAA1107Q9UPP5 1409 aa32.03■■■□□ 2.72
PRAF2-202ENST00000553851 PLEKHH2Q8IVE3 1493 aa32.02■■■□□ 2.72
PRAF2-202ENST00000553851 TIAM1Q13009 1591 aa32.02■■■□□ 2.72
PRAF2-202ENST00000553851 PLPPR3Q6T4P5 718 aa32■■■□□ 2.71
PRAF2-202ENST00000553851 ZNF644Q9H582 1327 aaPredicted RBP32■■■□□ 2.71
PRAF2-202ENST00000553851 ABCA6Q8N139 1617 aa32■■■□□ 2.71
PRAF2-202ENST00000553851 SPAG9O60271 1321 aaKnown RBP31.99■■■□□ 2.71
PRAF2-202ENST00000553851 KIDINS220Q9ULH0 1771 aa31.97■■■□□ 2.71
PRAF2-202ENST00000553851 NCOA2Q15596 1464 aa31.97■■■□□ 2.71
PRAF2-202ENST00000553851 REREQ9P2R6 1566 aa31.95■■■□□ 2.71
PRAF2-202ENST00000553851 SUPT6HQ7KZ85 1726 aaKnown RBP31.94■■■□□ 2.7
PRAF2-202ENST00000553851 FER1L4A9Z1Z3 1794 aa31.93■■■□□ 2.7
PRAF2-202ENST00000553851 LRRC9Q6ZRR7 1453 aa31.92■■■□□ 2.7
PRAF2-202ENST00000553851 KANK4Q5T7N3 995 aaPredicted RBP31.89■■■□□ 2.7
PRAF2-202ENST00000553851 AGLP35573 1532 aa31.88■■■□□ 2.69
PRAF2-202ENST00000553851 MAP3K1Q13233 1512 aa31.87■■■□□ 2.69
PRAF2-202ENST00000553851 MBD5Q9P267 1494 aa31.87■■■□□ 2.69
PRAF2-202ENST00000553851 ATP7AQ04656 1500 aa31.85■■■□□ 2.69
PRAF2-202ENST00000553851 CEBPAP49715 358 aaPredicted RBP31.83■■■□□ 2.69
PRAF2-202ENST00000553851 INO80Q9ULG1 1556 aaPredicted RBP31.81■■■□□ 2.68
PRAF2-202ENST00000553851 APLP2Q06481 763 aa31.8■■■□□ 2.68
PRAF2-202ENST00000553851 ESF1Q9H501 851 aaKnown RBP31.8■■■□□ 2.68
PRAF2-202ENST00000553851 LMTK3Q96Q04 1460 aa31.8■■■□□ 2.68
PRAF2-202ENST00000553851 CAMSAP2Q08AD1 1489 aa31.79■■■□□ 2.68
PRAF2-202ENST00000553851 A2MP01023 1474 aa31.77■■■□□ 2.68
PRAF2-202ENST00000553851 RSPH4AQ5TD94 716 aa31.76■■■□□ 2.68
PRAF2-202ENST00000553851 RTEL1-TNFRSF6BF6WH68 1400 aa31.74■■■□□ 2.67
PRAF2-202ENST00000553851 CCDC141Q6ZP82 1450 aa31.72■■■□□ 2.67
PRAF2-202ENST00000553851 HSPA2P54652 639 aa31.72■■■□□ 2.67
PRAF2-202ENST00000553851 PLXNC1O60486 1568 aa31.69■■■□□ 2.66
PRAF2-202ENST00000553851 MYOM3Q5VTT5 1437 aa31.67■■■□□ 2.66
PRAF2-202ENST00000553851 CNTLNQ9NXG0 1405 aa31.67■■■□□ 2.66
PRAF2-202ENST00000553851 TSPY4P0CV99 314 aa31.66■■■□□ 2.66
PRAF2-202ENST00000553851 TSPY10P0CW01 314 aa31.66■■■□□ 2.66
PRAF2-202ENST00000553851 GGT6Q6P531 493 aa31.66■■■□□ 2.66
PRAF2-202ENST00000553851 ADGBQ8N7X0 1667 aa31.66■■■□□ 2.66
PRAF2-202ENST00000553851 MIA2Q96PC5 1412 aa31.64■■■□□ 2.66
PRAF2-202ENST00000553851 ARHGEF5Q12774 1597 aa31.63■■■□□ 2.65
PRAF2-202ENST00000553851 DHX29Q7Z478 1369 aaKnown RBP31.63■■■□□ 2.65
PRAF2-202ENST00000553851 C3P01024 1663 aa31.62■■■□□ 2.65
PRAF2-202ENST00000553851 SETD1BQ9UPS6 1966 aaKnown RBP31.6■■■□□ 2.65
PRAF2-202ENST00000553851 ZMYM3Q14202 1370 aa31.59■■■□□ 2.65
PRAF2-202ENST00000553851 PREX1Q8TCU6 1659 aa31.58■■■□□ 2.65
PRAF2-202ENST00000553851 PPP6R1Q9UPN7 881 aa31.56■■■□□ 2.64
PRAF2-202ENST00000553851 UHRF1BP1Q6BDS2 1440 aa31.55■■■□□ 2.64
PRAF2-202ENST00000553851 KIF3BO15066 747 aa31.54■■■□□ 2.64
PRAF2-202ENST00000553851 MROH2AA6NES4 1674 aa31.52■■■□□ 2.64
PRAF2-202ENST00000553851 CLTCQ00610 1675 aaKnown RBP31.5■■■□□ 2.63
PRAF2-202ENST00000553851 MAST1Q9Y2H9 1570 aa31.46■■■□□ 2.63
PRAF2-202ENST00000553851 NPATQ14207 1427 aa31.46■■■□□ 2.63
PRAF2-202ENST00000553851 PTPN23Q9H3S7 1636 aa31.44■■■□□ 2.62
PRAF2-202ENST00000553851 FGD6Q6ZV73 1430 aa31.43■■■□□ 2.62
PRAF2-202ENST00000553851 ILDR1Q86SU0 546 aaPredicted RBP31.43■■■□□ 2.62
PRAF2-202ENST00000553851 ABCC5O15440 1437 aa31.4■■■□□ 2.62
PRAF2-202ENST00000553851 PTPRKQ15262 1439 aa31.4■■■□□ 2.62
PRAF2-202ENST00000553851 WASHC2CQ9Y4E1 1318 aa31.38■■■□□ 2.61
PRAF2-202ENST00000553851 TCOF1Q13428 1488 aaKnown RBP31.38■■■□□ 2.61
PRAF2-202ENST00000553851 DMRT2Q9Y5R5 561 aa31.33■■■□□ 2.61
PRAF2-202ENST00000553851 DAPK1P53355 1430 aa31.33■■■□□ 2.61
PRAF2-202ENST00000553851 KDM5DQ9BY66 1539 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms