RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 PCF11O94913 1555 aaKnown RBP25.95■■□□□ 1.74
ACTN1-209ENST00000553659 MYO5CQ9NQX4 1742 aa25.94■■□□□ 1.74
ACTN1-209ENST00000553659 CDK11AQ9UQ88 783 aaPredicted RBP25.94■■□□□ 1.74
ACTN1-209ENST00000553659 SIGLEC1Q9BZZ2 1709 aa25.94■■□□□ 1.74
ACTN1-209ENST00000553659 LMTK3Q96Q04 1460 aa25.92■■□□□ 1.74
ACTN1-209ENST00000553659 EFCAB2Q5VUJ9 269 aa25.91■■□□□ 1.74
ACTN1-209ENST00000553659 KIF14Q15058 1648 aa25.86■■□□□ 1.73
ACTN1-209ENST00000553659 FBXO41Q8TF61 875 aa25.86■■□□□ 1.73
ACTN1-209ENST00000553659 LRRIQ1Q96JM4 1722 aa25.85■■□□□ 1.73
ACTN1-209ENST00000553659 FER1L4A9Z1Z3 1794 aa25.85■■□□□ 1.73
ACTN1-209ENST00000553659 TROQ12816 1431 aaPredicted RBP25.84■■□□□ 1.73
ACTN1-209ENST00000553659 ATP10AO60312 1499 aa25.84■■□□□ 1.73
ACTN1-209ENST00000553659 MLECQ14165 292 aa25.83■■□□□ 1.73
ACTN1-209ENST00000553659 PLPPR3Q6T4P5 718 aa25.82■■□□□ 1.72
ACTN1-209ENST00000553659 CLIP1P30622 1438 aa25.8■■□□□ 1.72
ACTN1-209ENST00000553659 C9orf84Q5VXU9 1444 aa25.8■■□□□ 1.72
ACTN1-209ENST00000553659 ARHGAP5Q13017 1502 aa25.78■■□□□ 1.72
ACTN1-209ENST00000553659 ZNF518AQ6AHZ1 1483 aa25.78■■□□□ 1.72
ACTN1-209ENST00000553659 HSPA2P54652 639 aa25.77■■□□□ 1.72
ACTN1-209ENST00000553659 ARHGEF12Q9NZN5 1544 aa25.76■■□□□ 1.71
ACTN1-209ENST00000553659 CDC42BPBQ9Y5S2 1711 aa25.76■■□□□ 1.71
ACTN1-209ENST00000553659 AFAP1Q8N556 730 aa25.75■■□□□ 1.71
ACTN1-209ENST00000553659 KDM5CP41229 1560 aa25.74■■□□□ 1.71
ACTN1-209ENST00000553659 CASKIN1Q8WXD9 1431 aa25.7■■□□□ 1.7
ACTN1-209ENST00000553659 CCDC18Q5T9S5 1454 aa25.69■■□□□ 1.7
ACTN1-209ENST00000553659 MYT1LQ9UL68 1186 aa25.69■■□□□ 1.7
ACTN1-209ENST00000553659 PREX2Q70Z35 1606 aa25.67■■□□□ 1.7
ACTN1-209ENST00000553659 PREX1Q8TCU6 1659 aa25.66■■□□□ 1.7
ACTN1-209ENST00000553659 SETD1BQ9UPS6 1966 aaKnown RBP25.65■■□□□ 1.7
ACTN1-209ENST00000553659 DIP2CQ9Y2E4 1556 aa25.65■■□□□ 1.7
ACTN1-209ENST00000553659 MLH3Q9UHC1 1453 aa25.65■■□□□ 1.7
ACTN1-209ENST00000553659 CEBPAP49715 358 aaPredicted RBP25.64■■□□□ 1.7
ACTN1-209ENST00000553659 REREQ9P2R6 1566 aa25.64■■□□□ 1.69
ACTN1-209ENST00000553659 CDC42BPAQ5VT25 1732 aa25.62■■□□□ 1.69
ACTN1-209ENST00000553659 ABCC1P33527 1531 aa25.62■■□□□ 1.69
ACTN1-209ENST00000553659 ITSN2Q9NZM3 1697 aa25.61■■□□□ 1.69
ACTN1-209ENST00000553659 ABCA6Q8N139 1617 aa25.61■■□□□ 1.69
ACTN1-209ENST00000553659 TRAPPC8Q9Y2L5 1435 aa25.61■■□□□ 1.69
ACTN1-209ENST00000553659 FYCO1Q9BQS8 1478 aa25.58■■□□□ 1.69
ACTN1-209ENST00000553659 AGLP35573 1532 aa25.56■■□□□ 1.68
ACTN1-209ENST00000553659 KIDINS220Q9ULH0 1771 aa25.56■■□□□ 1.68
ACTN1-209ENST00000553659 CERKQ8TCT0 537 aa25.54■■□□□ 1.68
ACTN1-209ENST00000553659 C3P01024 1663 aa25.53■■□□□ 1.68
ACTN1-209ENST00000553659 STRCQ7RTU9 1775 aa25.52■■□□□ 1.68
ACTN1-209ENST00000553659 UHRF1BP1Q6BDS2 1440 aa25.52■■□□□ 1.68
ACTN1-209ENST00000553659 ESF1Q9H501 851 aaKnown RBP25.5■■□□□ 1.67
ACTN1-209ENST00000553659 DMRT2Q9Y5R5 561 aa25.49■■□□□ 1.67
ACTN1-209ENST00000553659 ZNF777Q9ULD5 760 aaPredicted RBP25.48■■□□□ 1.67
ACTN1-209ENST00000553659 SAMD9LQ8IVG5 1584 aa25.48■■□□□ 1.67
ACTN1-209ENST00000553659 GPATCH8Q9UKJ3 1502 aaKnown RBP25.47■■□□□ 1.67
ACTN1-209ENST00000553659 SYCP2Q9BX26 1530 aa25.43■■□□□ 1.66
ACTN1-209ENST00000553659 HNRNPMP52272 730 aaKnown RBP eCLIP25.43■■□□□ 1.661e-6■■■■■ 27.2
ACTN1-209ENST00000553659 CNTLNQ9NXG0 1405 aa25.43■■□□□ 1.66
ACTN1-209ENST00000553659 SPAG9O60271 1321 aaKnown RBP25.41■■□□□ 1.66
ACTN1-209ENST00000553659 CFDP1Q9UEE9 299 aaPredicted RBP25.4■■□□□ 1.66
ACTN1-209ENST00000553659 KIAA1107Q9UPP5 1409 aa25.39■■□□□ 1.66
ACTN1-209ENST00000553659 SUPT6HQ7KZ85 1726 aaKnown RBP25.39■■□□□ 1.65
ACTN1-209ENST00000553659 PLEKHH2Q8IVE3 1493 aa25.38■■□□□ 1.65
ACTN1-209ENST00000553659 MROH2AA6NES4 1674 aa25.38■■□□□ 1.65
ACTN1-209ENST00000553659 CCNB3Q8WWL7 1395 aa25.37■■□□□ 1.65
ACTN1-209ENST00000553659 ATP7AQ04656 1500 aa25.36■■□□□ 1.65
ACTN1-209ENST00000553659 PTPRTO14522 1441 aa25.36■■□□□ 1.65
ACTN1-209ENST00000553659 MTUS2Q5JR59 1369 aa25.35■■□□□ 1.65
ACTN1-209ENST00000553659 INO80Q9ULG1 1556 aaPredicted RBP25.33■■□□□ 1.65
ACTN1-209ENST00000553659 ZMYM3Q14202 1370 aa25.32■■□□□ 1.64
ACTN1-209ENST00000553659 NPATQ14207 1427 aa25.32■■□□□ 1.64
ACTN1-209ENST00000553659 A2MP01023 1474 aa25.3■■□□□ 1.64
ACTN1-209ENST00000553659 PLXNC1O60486 1568 aa25.3■■□□□ 1.64
ACTN1-209ENST00000553659 CLTCQ00610 1675 aaKnown RBP25.29■■□□□ 1.64
ACTN1-209ENST00000553659 NCOA1Q15788 1441 aa25.28■■□□□ 1.64
ACTN1-209ENST00000553659 ADGBQ8N7X0 1667 aa25.26■■□□□ 1.63
ACTN1-209ENST00000553659 TIAM1Q13009 1591 aa25.26■■□□□ 1.63
ACTN1-209ENST00000553659 EHBP1L1Q8N3D4 1523 aa25.24■■□□□ 1.63
ACTN1-209ENST00000553659 ZNF644Q9H582 1327 aaPredicted RBP25.24■■□□□ 1.63
ACTN1-209ENST00000553659 CAMSAP1Q5T5Y3 1602 aa25.23■■□□□ 1.63
ACTN1-209ENST00000553659 LOC105371045A0A1W2PR82 267 aa25.23■■□□□ 1.63
ACTN1-209ENST00000553659 GGT6Q6P531 493 aa25.23■■□□□ 1.63
ACTN1-209ENST00000553659 PPP6R1Q9UPN7 881 aa25.22■■□□□ 1.63
ACTN1-209ENST00000553659 MBD5Q9P267 1494 aa25.21■■□□□ 1.63
ACTN1-209ENST00000553659 LTBP4Q8N2S1 1624 aa25.21■■□□□ 1.63
ACTN1-209ENST00000553659 CEP162Q5TB80 1403 aa25.2■■□□□ 1.63
ACTN1-209ENST00000553659 ZNF142P52746 1687 aaPredicted RBP25.18■■□□□ 1.62
ACTN1-209ENST00000553659 RTEL1-TNFRSF6BF6WH68 1400 aa25.18■■□□□ 1.62
ACTN1-209ENST00000553659 PTPRKQ15262 1439 aa25.18■■□□□ 1.62
ACTN1-209ENST00000553659 MYO3AQ8NEV4 1616 aa25.17■■□□□ 1.62
ACTN1-209ENST00000553659 IQSEC2Q5JU85 1478 aa25.15■■□□□ 1.62
ACTN1-209ENST00000553659 NCKAP5LQ9HCH0 1330 aa25.14■■□□□ 1.62
ACTN1-209ENST00000553659 DHX29Q7Z478 1369 aaKnown RBP25.13■■□□□ 1.61
ACTN1-209ENST00000553659 CEP170BQ9Y4F5 1589 aaPredicted RBP25.13■■□□□ 1.61
ACTN1-209ENST00000553659 PKD2Q13563 968 aa25.12■■□□□ 1.61
ACTN1-209ENST00000553659 PLA2R1Q13018 1463 aa25.12■■□□□ 1.61
ACTN1-209ENST00000553659 RSPH4AQ5TD94 716 aa25.1■■□□□ 1.61
ACTN1-209ENST00000553659 NCOA2Q15596 1464 aa25.09■■□□□ 1.61
ACTN1-209ENST00000553659 CCDC141Q6ZP82 1450 aa25.08■■□□□ 1.6
ACTN1-209ENST00000553659 TCOF1Q13428 1488 aaKnown RBP25.07■■□□□ 1.6
ACTN1-209ENST00000553659 KIF3BO15066 747 aa25.06■■□□□ 1.6
ACTN1-209ENST00000553659 CAMSAP2Q08AD1 1489 aa25.06■■□□□ 1.6
ACTN1-209ENST00000553659 ZNF335Q9H4Z2 1342 aaPredicted RBP25.05■■□□□ 1.6
ACTN1-209ENST00000553659 A2ML1A8K2U0 1454 aa25.03■■□□□ 1.6
ACTN1-209ENST00000553659 DNMT1P26358 1616 aaKnown RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms