RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 MYO5CQ9NQX4 1742 aa24.66■■□□□ 1.54
SDR39U1-205ENST00000553546 ZMYM4Q5VZL5 1548 aa24.64■■□□□ 1.53
SDR39U1-205ENST00000553546 CCDC18Q5T9S5 1454 aa24.64■■□□□ 1.53
SDR39U1-205ENST00000553546 LRRIQ1Q96JM4 1722 aa24.64■■□□□ 1.53
SDR39U1-205ENST00000553546 CASKIN1Q8WXD9 1431 aa24.63■■□□□ 1.53
SDR39U1-205ENST00000553546 MAGI2Q86UL8 1455 aa24.59■■□□□ 1.53
SDR39U1-205ENST00000553546 EFCAB2Q5VUJ9 269 aa24.58■■□□□ 1.53
SDR39U1-205ENST00000553546 SCAPERQ9BY12 1400 aa24.58■■□□□ 1.53
SDR39U1-205ENST00000553546 FYCO1Q9BQS8 1478 aa24.58■■□□□ 1.52
SDR39U1-205ENST00000553546 ZFYVE16Q7Z3T8 1539 aa24.57■■□□□ 1.52
SDR39U1-205ENST00000553546 POGZQ7Z3K3 1410 aa24.57■■□□□ 1.52
SDR39U1-205ENST00000553546 ARID4BQ4LE39 1312 aaPredicted RBP24.57■■□□□ 1.52
SDR39U1-205ENST00000553546 SIGLEC1Q9BZZ2 1709 aa24.55■■□□□ 1.52
SDR39U1-205ENST00000553546 ARHGAP5Q13017 1502 aa24.54■■□□□ 1.52
SDR39U1-205ENST00000553546 HSPA2P54652 639 aa24.51■■□□□ 1.51
SDR39U1-205ENST00000553546 YEATS2Q9ULM3 1422 aa24.5■■□□□ 1.51
SDR39U1-205ENST00000553546 ZNF518AQ6AHZ1 1483 aa24.48■■□□□ 1.51
SDR39U1-205ENST00000553546 PREX2Q70Z35 1606 aa24.47■■□□□ 1.51
SDR39U1-205ENST00000553546 CDC42BPBQ9Y5S2 1711 aa24.47■■□□□ 1.51
SDR39U1-205ENST00000553546 KDM5CP41229 1560 aa24.43■■□□□ 1.5
SDR39U1-205ENST00000553546 ATP10AO60312 1499 aa24.42■■□□□ 1.5
SDR39U1-205ENST00000553546 FER1L4A9Z1Z3 1794 aa24.42■■□□□ 1.5
SDR39U1-205ENST00000553546 CERKQ8TCT0 537 aa24.41■■□□□ 1.5
SDR39U1-205ENST00000553546 C9orf84Q5VXU9 1444 aa24.41■■□□□ 1.5
SDR39U1-205ENST00000553546 CDC42BPAQ5VT25 1732 aa24.39■■□□□ 1.5
SDR39U1-205ENST00000553546 PLPPR3Q6T4P5 718 aa24.38■■□□□ 1.49
SDR39U1-205ENST00000553546 ABCC1P33527 1531 aa24.38■■□□□ 1.49
SDR39U1-205ENST00000553546 ILDR2Q71H61 639 aa24.36■■□□□ 1.49
SDR39U1-205ENST00000553546 ITSN2Q9NZM3 1697 aa24.35■■□□□ 1.49
SDR39U1-205ENST00000553546 AFAP1Q8N556 730 aa24.35■■□□□ 1.49
SDR39U1-205ENST00000553546 CEP162Q5TB80 1403 aa24.34■■□□□ 1.49
SDR39U1-205ENST00000553546 MLH3Q9UHC1 1453 aa24.33■■□□□ 1.49
SDR39U1-205ENST00000553546 PREX1Q8TCU6 1659 aa24.32■■□□□ 1.48
SDR39U1-205ENST00000553546 MYT1LQ9UL68 1186 aa24.32■■□□□ 1.48
SDR39U1-205ENST00000553546 REREQ9P2R6 1566 aa24.31■■□□□ 1.48
SDR39U1-205ENST00000553546 DIP2CQ9Y2E4 1556 aa24.31■■□□□ 1.48
SDR39U1-205ENST00000553546 ARHGEF12Q9NZN5 1544 aa24.3■■□□□ 1.48
SDR39U1-205ENST00000553546 MTUS2Q5JR59 1369 aa24.3■■□□□ 1.48
SDR39U1-205ENST00000553546 DISP3Q9P2K9 1392 aa24.3■■□□□ 1.48
SDR39U1-205ENST00000553546 MLECQ14165 292 aa24.3■■□□□ 1.48
SDR39U1-205ENST00000553546 TRAPPC8Q9Y2L5 1435 aa24.29■■□□□ 1.48
SDR39U1-205ENST00000553546 GPATCH8Q9UKJ3 1502 aaKnown RBP24.29■■□□□ 1.48
SDR39U1-205ENST00000553546 ABCA6Q8N139 1617 aa24.28■■□□□ 1.48
SDR39U1-205ENST00000553546 STRCQ7RTU9 1775 aa24.26■■□□□ 1.47
SDR39U1-205ENST00000553546 SAMD9LQ8IVG5 1584 aa24.26■■□□□ 1.47
SDR39U1-205ENST00000553546 EHBP1L1Q8N3D4 1523 aa24.25■■□□□ 1.47
SDR39U1-205ENST00000553546 SOCS7O14512 581 aa24.25■■□□□ 1.47
SDR39U1-205ENST00000553546 CCNB3Q8WWL7 1395 aa24.25■■□□□ 1.47
SDR39U1-205ENST00000553546 PLEKHH2Q8IVE3 1493 aa24.25■■□□□ 1.47
SDR39U1-205ENST00000553546 SPATA31D1Q6ZQQ2 1576 aa24.25■■□□□ 1.47
SDR39U1-205ENST00000553546 ZNF777Q9ULD5 760 aaPredicted RBP24.23■■□□□ 1.47
SDR39U1-205ENST00000553546 SYCP2Q9BX26 1530 aa24.23■■□□□ 1.47
SDR39U1-205ENST00000553546 KIDINS220Q9ULH0 1771 aa24.22■■□□□ 1.47
SDR39U1-205ENST00000553546 AGLP35573 1532 aa24.22■■□□□ 1.47
SDR39U1-205ENST00000553546 KIAA1107Q9UPP5 1409 aa24.21■■□□□ 1.47
SDR39U1-205ENST00000553546 CFDP1Q9UEE9 299 aaPredicted RBP24.21■■□□□ 1.47
SDR39U1-205ENST00000553546 TIAM1Q13009 1591 aa24.16■■□□□ 1.46
SDR39U1-205ENST00000553546 SPAG9O60271 1321 aaKnown RBP24.15■■□□□ 1.46
SDR39U1-205ENST00000553546 HNRNPMP52272 730 aaKnown RBP eCLIP24.14■■□□□ 1.45
SDR39U1-205ENST00000553546 ATP7AQ04656 1500 aa24.13■■□□□ 1.45
SDR39U1-205ENST00000553546 CEBPAP49715 358 aaPredicted RBP24.12■■□□□ 1.45
SDR39U1-205ENST00000553546 INO80Q9ULG1 1556 aaPredicted RBP24.12■■□□□ 1.45
SDR39U1-205ENST00000553546 SUPT6HQ7KZ85 1726 aaKnown RBP24.11■■□□□ 1.45
SDR39U1-205ENST00000553546 ESF1Q9H501 851 aaKnown RBP24.11■■□□□ 1.45
SDR39U1-205ENST00000553546 UHRF1BP1Q6BDS2 1440 aa24.1■■□□□ 1.45
SDR39U1-205ENST00000553546 VPS8Q8N3P4 1428 aa24.1■■□□□ 1.45
SDR39U1-205ENST00000553546 CNTLNQ9NXG0 1405 aa24.08■■□□□ 1.44
SDR39U1-205ENST00000553546 SETD1BQ9UPS6 1966 aaKnown RBP24.07■■□□□ 1.44
SDR39U1-205ENST00000553546 LOC105371045A0A1W2PR82 267 aa24.06■■□□□ 1.44
SDR39U1-205ENST00000553546 NCOA2Q15596 1464 aa24.06■■□□□ 1.44
SDR39U1-205ENST00000553546 LTBP4Q8N2S1 1624 aa24.06■■□□□ 1.44
SDR39U1-205ENST00000553546 C3P01024 1663 aa24.05■■□□□ 1.44
SDR39U1-205ENST00000553546 PLXNC1O60486 1568 aa24.04■■□□□ 1.44
SDR39U1-205ENST00000553546 A2MP01023 1474 aa24.03■■□□□ 1.44
SDR39U1-205ENST00000553546 DMRT2Q9Y5R5 561 aa24.03■■□□□ 1.44
SDR39U1-205ENST00000553546 PTPRTO14522 1441 aa24.02■■□□□ 1.44
SDR39U1-205ENST00000553546 ADGBQ8N7X0 1667 aa24.02■■□□□ 1.44
SDR39U1-205ENST00000553546 MBD5Q9P267 1494 aa24.02■■□□□ 1.44
SDR39U1-205ENST00000553546 ZNF644Q9H582 1327 aaPredicted RBP24.02■■□□□ 1.44
SDR39U1-205ENST00000553546 MROH2AA6NES4 1674 aa24.01■■□□□ 1.43
SDR39U1-205ENST00000553546 RTEL1-TNFRSF6BF6WH68 1400 aa24■■□□□ 1.43
SDR39U1-205ENST00000553546 LRRC9Q6ZRR7 1453 aa23.99■■□□□ 1.43
SDR39U1-205ENST00000553546 MAP3K1Q13233 1512 aa23.99■■□□□ 1.43
SDR39U1-205ENST00000553546 CAMSAP2Q08AD1 1489 aa23.98■■□□□ 1.43
SDR39U1-205ENST00000553546 CCDC141Q6ZP82 1450 aa23.97■■□□□ 1.43
SDR39U1-205ENST00000553546 IQSEC2Q5JU85 1478 aa23.96■■□□□ 1.43
SDR39U1-205ENST00000553546 RSPH4AQ5TD94 716 aa23.96■■□□□ 1.43
SDR39U1-205ENST00000553546 NPATQ14207 1427 aa23.93■■□□□ 1.42
SDR39U1-205ENST00000553546 NCOA1Q15788 1441 aa23.92■■□□□ 1.42
SDR39U1-205ENST00000553546 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
SDR39U1-205ENST00000553546 PPP6R1Q9UPN7 881 aa23.91■■□□□ 1.42
SDR39U1-205ENST00000553546 ZMYM3Q14202 1370 aa23.91■■□□□ 1.42
SDR39U1-205ENST00000553546 CLTCQ00610 1675 aaKnown RBP23.9■■□□□ 1.42
SDR39U1-205ENST00000553546 DHX29Q7Z478 1369 aaKnown RBP23.89■■□□□ 1.41
SDR39U1-205ENST00000553546 GGT6Q6P531 493 aa23.88■■□□□ 1.41
SDR39U1-205ENST00000553546 TSPY4P0CV99 314 aa23.84■■□□□ 1.41
SDR39U1-205ENST00000553546 TSPY10P0CW01 314 aa23.84■■□□□ 1.41
SDR39U1-205ENST00000553546 CAMSAP1Q5T5Y3 1602 aa23.84■■□□□ 1.41
SDR39U1-205ENST00000553546 MIA2Q96PC5 1412 aa23.84■■□□□ 1.41
SDR39U1-205ENST00000553546 KANK4Q5T7N3 995 aaPredicted RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms