RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 ATP1B4Q9UN42 357 aaPredicted RBP19.61■□□□□ 0.73
SRP54-203ENST00000553544 ZMYM4Q5VZL5 1548 aa19.61■□□□□ 0.73
SRP54-203ENST00000553544 CDK11AQ9UQ88 783 aaPredicted RBP19.59■□□□□ 0.73
SRP54-203ENST00000553544 CEBPAP49715 358 aaPredicted RBP19.58■□□□□ 0.72
SRP54-203ENST00000553544 ATP10AO60312 1499 aa19.58■□□□□ 0.72
SRP54-203ENST00000553544 HECW1Q76N89 1606 aa19.56■□□□□ 0.72
SRP54-203ENST00000553544 TTC37Q6PGP7 1564 aa19.55■□□□□ 0.72
SRP54-203ENST00000553544 MYT1LQ9UL68 1186 aa19.55■□□□□ 0.72
SRP54-203ENST00000553544 C9orf84Q5VXU9 1444 aa19.52■□□□□ 0.72
SRP54-203ENST00000553544 UBTFP17480 764 aaKnown RBP19.52■□□□□ 0.72
SRP54-203ENST00000553544 AFAP1Q8N556 730 aa19.52■□□□□ 0.72
SRP54-203ENST00000553544 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
SRP54-203ENST00000553544 SIGLEC1Q9BZZ2 1709 aa19.5■□□□□ 0.71
SRP54-203ENST00000553544 ARHGEF12Q9NZN5 1544 aa19.49■□□□□ 0.71
SRP54-203ENST00000553544 FER1L4A9Z1Z3 1794 aa19.48■□□□□ 0.71
SRP54-203ENST00000553544 DISP3Q9P2K9 1392 aa19.47■□□□□ 0.71
SRP54-203ENST00000553544 ESF1Q9H501 851 aaKnown RBP19.47■□□□□ 0.71
SRP54-203ENST00000553544 FMN1Q68DA7 1419 aa19.47■□□□□ 0.71
SRP54-203ENST00000553544 EHMT2Q96KQ7 1210 aa19.46■□□□□ 0.71
SRP54-203ENST00000553544 UHRF1BP1Q6BDS2 1440 aa19.44■□□□□ 0.7
SRP54-203ENST00000553544 ZNF518AQ6AHZ1 1483 aa19.44■□□□□ 0.7
SRP54-203ENST00000553544 ILDR2Q71H61 639 aa19.43■□□□□ 0.7
SRP54-203ENST00000553544 SETD1BQ9UPS6 1966 aaKnown RBP19.43■□□□□ 0.7
SRP54-203ENST00000553544 SOCS7O14512 581 aa19.42■□□□□ 0.7
SRP54-203ENST00000553544 PREX1Q8TCU6 1659 aa19.41■□□□□ 0.7
SRP54-203ENST00000553544 CLIP1P30622 1438 aa19.39■□□□□ 0.69
SRP54-203ENST00000553544 TROQ12816 1431 aaPredicted RBP19.39■□□□□ 0.69
SRP54-203ENST00000553544 ARHGAP5Q13017 1502 aa19.39■□□□□ 0.69
SRP54-203ENST00000553544 PTPRTO14522 1441 aa19.37■□□□□ 0.69
SRP54-203ENST00000553544 MYO5CQ9NQX4 1742 aa19.37■□□□□ 0.69
SRP54-203ENST00000553544 TRAPPC8Q9Y2L5 1435 aa19.35■□□□□ 0.69
SRP54-203ENST00000553544 STRCQ7RTU9 1775 aa19.35■□□□□ 0.69
SRP54-203ENST00000553544 MLH3Q9UHC1 1453 aa19.35■□□□□ 0.69
SRP54-203ENST00000553544 ARHGAP35Q9NRY4 1499 aa19.34■□□□□ 0.69
SRP54-203ENST00000553544 KDM5CP41229 1560 aa19.33■□□□□ 0.69
SRP54-203ENST00000553544 KIF14Q15058 1648 aa19.33■□□□□ 0.68
SRP54-203ENST00000553544 REREQ9P2R6 1566 aa19.29■□□□□ 0.68
SRP54-203ENST00000553544 DIP2CQ9Y2E4 1556 aa19.29■□□□□ 0.68
SRP54-203ENST00000553544 AGLP35573 1532 aa19.29■□□□□ 0.68
SRP54-203ENST00000553544 CNTLNQ9NXG0 1405 aa19.28■□□□□ 0.68
SRP54-203ENST00000553544 ZNF777Q9ULD5 760 aaPredicted RBP19.25■□□□□ 0.67
SRP54-203ENST00000553544 NCOA1Q15788 1441 aa19.24■□□□□ 0.67
SRP54-203ENST00000553544 ZMYM3Q14202 1370 aa19.23■□□□□ 0.67
SRP54-203ENST00000553544 C3P01024 1663 aa19.23■□□□□ 0.67
SRP54-203ENST00000553544 IQSEC2Q5JU85 1478 aa19.22■□□□□ 0.67
SRP54-203ENST00000553544 ABCA6Q8N139 1617 aa19.22■□□□□ 0.67
SRP54-203ENST00000553544 SPAG9O60271 1321 aaKnown RBP19.22■□□□□ 0.67
SRP54-203ENST00000553544 NCKAP5LQ9HCH0 1330 aa19.22■□□□□ 0.67
SRP54-203ENST00000553544 LTBP4Q8N2S1 1624 aa19.22■□□□□ 0.67
SRP54-203ENST00000553544 HNRNPMP52272 730 aaKnown RBP eCLIP19.21■□□□□ 0.67
SRP54-203ENST00000553544 CDC42BPBQ9Y5S2 1711 aa19.21■□□□□ 0.67
SRP54-203ENST00000553544 NPATQ14207 1427 aa19.2■□□□□ 0.66
SRP54-203ENST00000553544 UBAP1LF5GYI3 381 aa19.2■□□□□ 0.66
SRP54-203ENST00000553544 PKD2Q13563 968 aa19.2■□□□□ 0.66
SRP54-203ENST00000553544 CASKIN1Q8WXD9 1431 aa19.19■□□□□ 0.66
SRP54-203ENST00000553544 ABCC1P33527 1531 aa19.19■□□□□ 0.66
SRP54-203ENST00000553544 CCDC18Q5T9S5 1454 aa19.18■□□□□ 0.66
SRP54-203ENST00000553544 SPATA31D1Q6ZQQ2 1576 aa19.16■□□□□ 0.66
SRP54-203ENST00000553544 ZNF335Q9H4Z2 1342 aaPredicted RBP19.16■□□□□ 0.66
SRP54-203ENST00000553544 LRRIQ1Q96JM4 1722 aa19.15■□□□□ 0.66
SRP54-203ENST00000553544 KIDINS220Q9ULH0 1771 aa19.15■□□□□ 0.66
SRP54-203ENST00000553544 GGT6Q6P531 493 aa19.15■□□□□ 0.66
SRP54-203ENST00000553544 CFDP1Q9UEE9 299 aaPredicted RBP19.15■□□□□ 0.66
SRP54-203ENST00000553544 CAMSAP1Q5T5Y3 1602 aa19.14■□□□□ 0.66
SRP54-203ENST00000553544 PREX2Q70Z35 1606 aa19.14■□□□□ 0.66
SRP54-203ENST00000553544 PPP6R1Q9UPN7 881 aa19.14■□□□□ 0.65
SRP54-203ENST00000553544 ITSN2Q9NZM3 1697 aa19.12■□□□□ 0.65
SRP54-203ENST00000553544 SAMD9LQ8IVG5 1584 aa19.11■□□□□ 0.65
SRP54-203ENST00000553544 GPATCH8Q9UKJ3 1502 aaKnown RBP19.1■□□□□ 0.65
SRP54-203ENST00000553544 KIAA1107Q9UPP5 1409 aa19.09■□□□□ 0.65
SRP54-203ENST00000553544 A2MP01023 1474 aa19.07■□□□□ 0.64
SRP54-203ENST00000553544 MROH2AA6NES4 1674 aa19.07■□□□□ 0.64
SRP54-203ENST00000553544 PTPRKQ15262 1439 aa19.07■□□□□ 0.64
SRP54-203ENST00000553544 CCNB3Q8WWL7 1395 aa19.06■□□□□ 0.64
SRP54-203ENST00000553544 PLA2R1Q13018 1463 aa19.06■□□□□ 0.64
SRP54-203ENST00000553544 PLEKHH2Q8IVE3 1493 aa19.06■□□□□ 0.64
SRP54-203ENST00000553544 CDC42BPAQ5VT25 1732 aa19.05■□□□□ 0.64
SRP54-203ENST00000553544 SYCP2Q9BX26 1530 aa19.05■□□□□ 0.64
SRP54-203ENST00000553544 FYCO1Q9BQS8 1478 aa19.03■□□□□ 0.64
SRP54-203ENST00000553544 SUPT6HQ7KZ85 1726 aaKnown RBP19.03■□□□□ 0.64
SRP54-203ENST00000553544 TOM1O60784 492 aa19.03■□□□□ 0.64
SRP54-203ENST00000553544 TCOF1Q13428 1488 aaKnown RBP19.03■□□□□ 0.64
SRP54-203ENST00000553544 ATP7AQ04656 1500 aa19.02■□□□□ 0.64
SRP54-203ENST00000553544 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
SRP54-203ENST00000553544 PIP4K2BP78356 416 aa19■□□□□ 0.63
SRP54-203ENST00000553544 CLTCQ00610 1675 aaKnown RBP18.99■□□□□ 0.63
SRP54-203ENST00000553544 HSPA1LP34931 641 aa18.99■□□□□ 0.63
SRP54-203ENST00000553544 ZNF644Q9H582 1327 aaPredicted RBP18.99■□□□□ 0.63
SRP54-203ENST00000553544 CEP170BQ9Y4F5 1589 aaPredicted RBP18.98■□□□□ 0.63
SRP54-203ENST00000553544 MTUS2Q5JR59 1369 aa18.98■□□□□ 0.63
SRP54-203ENST00000553544 FBXO31Q5XUX0 539 aaPredicted RBP18.97■□□□□ 0.63
SRP54-203ENST00000553544 ANKLE2Q86XL3 938 aa18.97■□□□□ 0.63
SRP54-203ENST00000553544 PLXNC1O60486 1568 aa18.97■□□□□ 0.63
SRP54-203ENST00000553544 A2ML1A8K2U0 1454 aa18.97■□□□□ 0.63
SRP54-203ENST00000553544 DHX29Q7Z478 1369 aaKnown RBP18.96■□□□□ 0.63
SRP54-203ENST00000553544 KIF3BO15066 747 aa18.96■□□□□ 0.63
SRP54-203ENST00000553544 THEMISQ8N1K5 641 aaPredicted RBP18.96■□□□□ 0.63
SRP54-203ENST00000553544 MYO3AQ8NEV4 1616 aa18.96■□□□□ 0.63
SRP54-203ENST00000553544 ZNF142P52746 1687 aaPredicted RBP18.94■□□□□ 0.62
SRP54-203ENST00000553544 WASHC2CQ9Y4E1 1318 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms