RNA–Protein interactions for RNA: ENST00000553477.1

AC103996.3-201, humanhuman

TSL 3 BASIC

Gene AC103996.3, Length 442 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC103996.3-201ENST00000553477 ST18O60284 1047 aa10.38□□□□□ -0.75
AC103996.3-201ENST00000553477 PDCD7Q8N8D1 485 aaKnown RBP10.38□□□□□ -0.75
AC103996.3-201ENST00000553477 WRNQ14191 1432 aaPredicted RBP eCLIP10.35□□□□□ -0.75
AC103996.3-201ENST00000553477 PSEN1P49768 467 aa10.35□□□□□ -0.75
AC103996.3-201ENST00000553477 SPOCK2Q92563 424 aa10.35□□□□□ -0.75
AC103996.3-201ENST00000553477 POLA1P09884 1462 aaPredicted RBP10.35□□□□□ -0.75
AC103996.3-201ENST00000553477 ILDR1Q86SU0 546 aaPredicted RBP10.33□□□□□ -0.76
AC103996.3-201ENST00000553477 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.33□□□□□ -0.76
AC103996.3-201ENST00000553477 FGD5Q6ZNL6 1462 aa10.33□□□□□ -0.76
AC103996.3-201ENST00000553477 IFT140Q96RY7 1462 aa10.33□□□□□ -0.76
AC103996.3-201ENST00000553477 SYNJ1O43426 1573 aa10.32□□□□□ -0.76
AC103996.3-201ENST00000553477 TOP2BQ02880 1626 aa10.32□□□□□ -0.76
AC103996.3-201ENST00000553477 MKRN3Q13064 507 aaKnown RBP10.31□□□□□ -0.76
AC103996.3-201ENST00000553477 CDAN1Q8IWY9 1227 aa10.31□□□□□ -0.76
AC103996.3-201ENST00000553477 BIVM-ERCC5R4GMW8 1640 aa10.31□□□□□ -0.76
AC103996.3-201ENST00000553477 RAD54L2Q9Y4B4 1467 aa10.3□□□□□ -0.76
AC103996.3-201ENST00000553477 TARBP1Q13395 1621 aaKnown RBP10.3□□□□□ -0.76
AC103996.3-201ENST00000553477 PDAP1Q13442 181 aaKnown RBP10.3□□□□□ -0.76
AC103996.3-201ENST00000553477 SOGA1O94964 1423 aa10.3□□□□□ -0.76
AC103996.3-201ENST00000553477 ZNF608Q9ULD9 1512 aaPredicted RBP10.28□□□□□ -0.76
AC103996.3-201ENST00000553477 GOLGA2Q08379 1002 aa10.28□□□□□ -0.76
AC103996.3-201ENST00000553477 L3MBTL3Q96JM7 780 aaPredicted RBP10.28□□□□□ -0.76
AC103996.3-201ENST00000553477 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.28□□□□□ -0.76
AC103996.3-201ENST00000553477 SNPHO15079 494 aa10.27□□□□□ -0.77
AC103996.3-201ENST00000553477 TMEM121BQ9BXQ6 578 aaPredicted RBP10.27□□□□□ -0.77
AC103996.3-201ENST00000553477 CIZ1Q9ULV3 898 aaPredicted RBP10.26□□□□□ -0.77
AC103996.3-201ENST00000553477 ABCA10Q8WWZ4 1543 aa10.24□□□□□ -0.77
AC103996.3-201ENST00000553477 AQRO60306 1485 aaKnown RBP eCLIP10.23□□□□□ -0.77
AC103996.3-201ENST00000553477 WDR97A6NE52 1622 aa10.23□□□□□ -0.77
AC103996.3-201ENST00000553477 C3orf67Q6ZVT6 689 aa10.23□□□□□ -0.77
AC103996.3-201ENST00000553477 TDRD9Q8NDG6 1382 aaKnown RBP10.23□□□□□ -0.77
AC103996.3-201ENST00000553477 EIF4G3O43432 1585 aaKnown RBP10.22□□□□□ -0.77
AC103996.3-201ENST00000553477 DPY19L2Q6NUT2 758 aa10.21□□□□□ -0.77
AC103996.3-201ENST00000553477 CABP2Q9NPB3 220 aa10.2□□□□□ -0.78
AC103996.3-201ENST00000553477 ABCA5Q8WWZ7 1642 aa10.18□□□□□ -0.78
AC103996.3-201ENST00000553477 GAPVD1Q14C86 1478 aa10.18□□□□□ -0.78
AC103996.3-201ENST00000553477 TRIM41Q8WV44 630 aa10.18□□□□□ -0.78
AC103996.3-201ENST00000553477 GRIN2BQ13224 1484 aa10.17□□□□□ -0.78
AC103996.3-201ENST00000553477 MARVELD3Q96A59 401 aa10.16□□□□□ -0.78
AC103996.3-201ENST00000553477 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
AC103996.3-201ENST00000553477 SNAPC4Q5SXM2 1469 aa10.13□□□□□ -0.79
AC103996.3-201ENST00000553477 KIF27Q86VH2 1401 aa10.13□□□□□ -0.79
AC103996.3-201ENST00000553477 PBRM1Q86U86 1689 aa10.12□□□□□ -0.79
AC103996.3-201ENST00000553477 MAGI1Q96QZ7 1491 aaPredicted RBP10.12□□□□□ -0.79
AC103996.3-201ENST00000553477 ERICH3Q5RHP9 1530 aa10.12□□□□□ -0.79
AC103996.3-201ENST00000553477 EFCAB3Q8N7B9 438 aa10.1□□□□□ -0.79
AC103996.3-201ENST00000553477 IGF1RP08069 1367 aa10.1□□□□□ -0.79
AC103996.3-201ENST00000553477 RUSC2Q8N2Y8 1516 aa10.09□□□□□ -0.79
AC103996.3-201ENST00000553477 SPNS2Q8IVW8 549 aa10.09□□□□□ -0.79
AC103996.3-201ENST00000553477 SYNJ2O15056 1496 aa10.09□□□□□ -0.79
AC103996.3-201ENST00000553477 POTEB3A0JP26 581 aa10.08□□□□□ -0.8
AC103996.3-201ENST00000553477 HOXB3P14651 431 aaPredicted RBP10.08□□□□□ -0.8
AC103996.3-201ENST00000553477 POTEBQ6S5H4 581 aa10.08□□□□□ -0.8
AC103996.3-201ENST00000553477 ADAMTS12P58397 1594 aa10.08□□□□□ -0.8
AC103996.3-201ENST00000553477 EMP3P54852 163 aa10.07□□□□□ -0.8
AC103996.3-201ENST00000553477 CHMP7Q8WUX9 453 aaPredicted RBP10.07□□□□□ -0.8
AC103996.3-201ENST00000553477 RNF25Q96BH1 459 aaPredicted RBP10.07□□□□□ -0.8
AC103996.3-201ENST00000553477 FHAD1B1AJZ9 1412 aa10.07□□□□□ -0.8
AC103996.3-201ENST00000553477 MMRN1Q13201 1228 aa10.06□□□□□ -0.8
AC103996.3-201ENST00000553477 CHD1O14646 1710 aa10.06□□□□□ -0.8
AC103996.3-201ENST00000553477 G3V3G9 751 aa10.05□□□□□ -0.8
AC103996.3-201ENST00000553477 DNAJC5Q9H3Z4 198 aa10.05□□□□□ -0.8
AC103996.3-201ENST00000553477 RIOK3O14730 519 aaKnown RBP10.04□□□□□ -0.8
AC103996.3-201ENST00000553477 HS3ST6Q96QI5 342 aa10.04□□□□□ -0.8
AC103996.3-201ENST00000553477 GRIN2AQ12879 1464 aa10.04□□□□□ -0.8
AC103996.3-201ENST00000553477 CUL7Q14999 1698 aa10.02□□□□□ -0.8
AC103996.3-201ENST00000553477 CARMIL1Q5VZK9 1371 aa10.02□□□□□ -0.8
AC103996.3-201ENST00000553477 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.81
AC103996.3-201ENST00000553477 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
AC103996.3-201ENST00000553477 FAM205CA6NFA0 338 aa10.01□□□□□ -0.81
AC103996.3-201ENST00000553477 SOX12O15370 315 aa10.01□□□□□ -0.81
AC103996.3-201ENST00000553477 NUP160Q12769 1436 aa10□□□□□ -0.81
AC103996.3-201ENST00000553477 EEA1Q15075 1411 aa10□□□□□ -0.81
AC103996.3-201ENST00000553477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10□□□□□ -0.81
AC103996.3-201ENST00000553477 HOXB1P14653 301 aaPredicted RBP10□□□□□ -0.81
AC103996.3-201ENST00000553477 ZFP91Q96JP5 570 aaPredicted RBP10□□□□□ -0.81
AC103996.3-201ENST00000553477 MS4A4AQ96JQ5 239 aa10□□□□□ -0.81
AC103996.3-201ENST00000553477 CLASP1Q7Z460 1538 aa9.99□□□□□ -0.81
AC103996.3-201ENST00000553477 VGFO15240 615 aaPredicted RBP9.99□□□□□ -0.81
AC103996.3-201ENST00000553477 MICALL2Q8IY33 904 aa9.99□□□□□ -0.81
AC103996.3-201ENST00000553477 PRXQ9BXM0 1461 aa9.98□□□□□ -0.81
AC103996.3-201ENST00000553477 CEP170Q5SW79 1584 aa9.98□□□□□ -0.81
AC103996.3-201ENST00000553477 TMEM92Q6UXU6 159 aa9.98□□□□□ -0.81
AC103996.3-201ENST00000553477 RAPGEF2Q9Y4G8 1499 aa9.97□□□□□ -0.81
AC103996.3-201ENST00000553477 DOK7Q18PE1 504 aa9.96□□□□□ -0.82
AC103996.3-201ENST00000553477 FAM9AQ8IZU1 332 aaPredicted RBP9.96□□□□□ -0.82
AC103996.3-201ENST00000553477 PHF8Q9UPP1 1060 aa9.95□□□□□ -0.82
AC103996.3-201ENST00000553477 ZNF710Q8N1W2 664 aa9.93□□□□□ -0.82
AC103996.3-201ENST00000553477 KIAA0586Q9BVV6 1533 aa9.92□□□□□ -0.82
AC103996.3-201ENST00000553477 SHROOM2Q13796 1616 aa9.9□□□□□ -0.82
AC103996.3-201ENST00000553477 ARHGEF11O15085 1522 aa9.9□□□□□ -0.82
AC103996.3-201ENST00000553477 FBXO22Q8NEZ5 403 aa9.89□□□□□ -0.83
AC103996.3-201ENST00000553477 JPH4Q96JJ6 628 aa9.89□□□□□ -0.83
AC103996.3-201ENST00000553477 ZSWIM6Q9HCJ5 1215 aa9.89□□□□□ -0.83
AC103996.3-201ENST00000553477 RIMBP3CA6NJZ7 1639 aa9.89□□□□□ -0.83
AC103996.3-201ENST00000553477 RIMBP3BA6NNM3 1639 aa9.89□□□□□ -0.83
AC103996.3-201ENST00000553477 KIF21BO75037 1637 aa9.89□□□□□ -0.83
AC103996.3-201ENST00000553477 RIMBP3Q9UFD9 1639 aa9.89□□□□□ -0.83
AC103996.3-201ENST00000553477 RIMBP2O15034 1052 aa9.88□□□□□ -0.83
AC103996.3-201ENST00000553477 ERBB3P21860 1342 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms