RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 KIF14Q15058 1648 aa26.82■■□□□ 1.88
XRCC3-204ENST00000553361 MAGI2Q86UL8 1455 aa26.81■■□□□ 1.88
XRCC3-204ENST00000553361 ZFYVE16Q7Z3T8 1539 aa26.8■■□□□ 1.88
XRCC3-204ENST00000553361 AFAP1Q8N556 730 aa26.8■■□□□ 1.88
XRCC3-204ENST00000553361 ZMYM4Q5VZL5 1548 aa26.8■■□□□ 1.88
XRCC3-204ENST00000553361 BCORL1Q5H9F3 1711 aa26.79■■□□□ 1.88
XRCC3-204ENST00000553361 MYT1LQ9UL68 1186 aa26.79■■□□□ 1.88
XRCC3-204ENST00000553361 ARHGAP5Q13017 1502 aa26.77■■□□□ 1.88
XRCC3-204ENST00000553361 ILDR1Q86SU0 546 aaPredicted RBP26.77■■□□□ 1.88
XRCC3-204ENST00000553361 MADDQ8WXG6 1647 aa26.76■■□□□ 1.87
XRCC3-204ENST00000553361 CCDC18Q5T9S5 1454 aa26.75■■□□□ 1.87
XRCC3-204ENST00000553361 PCF11O94913 1555 aaKnown RBP26.75■■□□□ 1.87
XRCC3-204ENST00000553361 MYO5CQ9NQX4 1742 aa26.73■■□□□ 1.87
XRCC3-204ENST00000553361 LRRIQ1Q96JM4 1722 aa26.72■■□□□ 1.87
XRCC3-204ENST00000553361 ATP10AO60312 1499 aa26.72■■□□□ 1.87
XRCC3-204ENST00000553361 ZNF518AQ6AHZ1 1483 aa26.68■■□□□ 1.86
XRCC3-204ENST00000553361 FYCO1Q9BQS8 1478 aa26.68■■□□□ 1.86
XRCC3-204ENST00000553361 C9orf84Q5VXU9 1444 aa26.66■■□□□ 1.86
XRCC3-204ENST00000553361 ZNF777Q9ULD5 760 aaPredicted RBP26.66■■□□□ 1.86
XRCC3-204ENST00000553361 RIMS1Q86UR5 1692 aaKnown RBP26.65■■□□□ 1.86
XRCC3-204ENST00000553361 SIGLEC1Q9BZZ2 1709 aa26.64■■□□□ 1.85
XRCC3-204ENST00000553361 TRAPPC8Q9Y2L5 1435 aa26.62■■□□□ 1.85
XRCC3-204ENST00000553361 HSPA2P54652 639 aa26.6■■□□□ 1.85
XRCC3-204ENST00000553361 ARHGEF12Q9NZN5 1544 aa26.6■■□□□ 1.85
XRCC3-204ENST00000553361 LMTK3Q96Q04 1460 aa26.58■■□□□ 1.85
XRCC3-204ENST00000553361 CDC42BPBQ9Y5S2 1711 aa26.57■■□□□ 1.84
XRCC3-204ENST00000553361 CEBPAP49715 358 aaPredicted RBP26.57■■□□□ 1.84
XRCC3-204ENST00000553361 KDM5CP41229 1560 aa26.57■■□□□ 1.84
XRCC3-204ENST00000553361 HNRNPMP52272 730 aaKnown RBP eCLIP26.55■■□□□ 1.845e-6■■■■□ 20.3
XRCC3-204ENST00000553361 MLH3Q9UHC1 1453 aa26.55■■□□□ 1.84
XRCC3-204ENST00000553361 PREX2Q70Z35 1606 aa26.54■■□□□ 1.84
XRCC3-204ENST00000553361 CFDP1Q9UEE9 299 aaPredicted RBP26.54■■□□□ 1.84
XRCC3-204ENST00000553361 MTUS2Q5JR59 1369 aa26.54■■□□□ 1.84
XRCC3-204ENST00000553361 GPATCH8Q9UKJ3 1502 aaKnown RBP26.54■■□□□ 1.84
XRCC3-204ENST00000553361 ABCC1P33527 1531 aa26.53■■□□□ 1.84
XRCC3-204ENST00000553361 CCNB3Q8WWL7 1395 aa26.5■■□□□ 1.83
XRCC3-204ENST00000553361 CEP162Q5TB80 1403 aa26.49■■□□□ 1.83
XRCC3-204ENST00000553361 DIP2CQ9Y2E4 1556 aa26.49■■□□□ 1.83
XRCC3-204ENST00000553361 ESF1Q9H501 851 aaKnown RBP26.48■■□□□ 1.83
XRCC3-204ENST00000553361 SPAG9O60271 1321 aaKnown RBP26.47■■□□□ 1.83
XRCC3-204ENST00000553361 FER1L4A9Z1Z3 1794 aa26.47■■□□□ 1.83
XRCC3-204ENST00000553361 CDC42BPAQ5VT25 1732 aa26.46■■□□□ 1.83
XRCC3-204ENST00000553361 LOC105371045A0A1W2PR82 267 aa26.46■■□□□ 1.83
XRCC3-204ENST00000553361 ABCA6Q8N139 1617 aa26.43■■□□□ 1.82
XRCC3-204ENST00000553361 ITSN2Q9NZM3 1697 aa26.42■■□□□ 1.82
XRCC3-204ENST00000553361 SAMD9LQ8IVG5 1584 aa26.41■■□□□ 1.82
XRCC3-204ENST00000553361 ZNF644Q9H582 1327 aaPredicted RBP26.4■■□□□ 1.82
XRCC3-204ENST00000553361 KIAA1107Q9UPP5 1409 aa26.4■■□□□ 1.82
XRCC3-204ENST00000553361 SYCP2Q9BX26 1530 aa26.4■■□□□ 1.82
XRCC3-204ENST00000553361 REREQ9P2R6 1566 aa26.4■■□□□ 1.82
XRCC3-204ENST00000553361 FBXO41Q8TF61 875 aa26.39■■□□□ 1.82
XRCC3-204ENST00000553361 AGLP35573 1532 aa26.38■■□□□ 1.81
XRCC3-204ENST00000553361 PLEKHH2Q8IVE3 1493 aa26.37■■□□□ 1.81
XRCC3-204ENST00000553361 KIDINS220Q9ULH0 1771 aa26.36■■□□□ 1.81
XRCC3-204ENST00000553361 EHBP1L1Q8N3D4 1523 aa26.31■■□□□ 1.8
XRCC3-204ENST00000553361 UHRF1BP1Q6BDS2 1440 aa26.31■■□□□ 1.8
XRCC3-204ENST00000553361 GGT6Q6P531 493 aa26.28■■□□□ 1.8
XRCC3-204ENST00000553361 CNTLNQ9NXG0 1405 aa26.27■■□□□ 1.8
XRCC3-204ENST00000553361 ATP7AQ04656 1500 aa26.27■■□□□ 1.8
XRCC3-204ENST00000553361 TIAM1Q13009 1591 aa26.27■■□□□ 1.8
XRCC3-204ENST00000553361 A2MP01023 1474 aa26.25■■□□□ 1.79
XRCC3-204ENST00000553361 ZMYM3Q14202 1370 aa26.24■■□□□ 1.79
XRCC3-204ENST00000553361 MBD5Q9P267 1494 aa26.23■■□□□ 1.79
XRCC3-204ENST00000553361 PREX1Q8TCU6 1659 aa26.23■■□□□ 1.79
XRCC3-204ENST00000553361 DMRT2Q9Y5R5 561 aa26.23■■□□□ 1.79
XRCC3-204ENST00000553361 NCOA2Q15596 1464 aa26.23■■□□□ 1.79
XRCC3-204ENST00000553361 C3P01024 1663 aa26.2■■□□□ 1.78
XRCC3-204ENST00000553361 CERKQ8TCT0 537 aa26.2■■□□□ 1.78
XRCC3-204ENST00000553361 VPS8Q8N3P4 1428 aa26.2■■□□□ 1.78
XRCC3-204ENST00000553361 SETD1BQ9UPS6 1966 aaKnown RBP26.18■■□□□ 1.78
XRCC3-204ENST00000553361 SUPT6HQ7KZ85 1726 aaKnown RBP26.18■■□□□ 1.78
XRCC3-204ENST00000553361 INO80Q9ULG1 1556 aaPredicted RBP26.18■■□□□ 1.78
XRCC3-204ENST00000553361 RSPH4AQ5TD94 716 aa26.17■■□□□ 1.78
XRCC3-204ENST00000553361 RTEL1-TNFRSF6BF6WH68 1400 aa26.15■■□□□ 1.78
XRCC3-204ENST00000553361 KANK4Q5T7N3 995 aaPredicted RBP26.15■■□□□ 1.78
XRCC3-204ENST00000553361 PPP6R1Q9UPN7 881 aa26.14■■□□□ 1.78
XRCC3-204ENST00000553361 DHX29Q7Z478 1369 aaKnown RBP26.14■■□□□ 1.78
XRCC3-204ENST00000553361 PLXNC1O60486 1568 aa26.14■■□□□ 1.78
XRCC3-204ENST00000553361 KIF3BO15066 747 aa26.12■■□□□ 1.77
XRCC3-204ENST00000553361 TSPY4P0CV99 314 aa26.12■■□□□ 1.77
XRCC3-204ENST00000553361 TSPY10P0CW01 314 aa26.12■■□□□ 1.77
XRCC3-204ENST00000553361 NPATQ14207 1427 aa26.12■■□□□ 1.77
XRCC3-204ENST00000553361 CAMSAP2Q08AD1 1489 aa26.11■■□□□ 1.77
XRCC3-204ENST00000553361 LRRC9Q6ZRR7 1453 aa26.11■■□□□ 1.77
XRCC3-204ENST00000553361 CCDC141Q6ZP82 1450 aa26.11■■□□□ 1.77
XRCC3-204ENST00000553361 STRCQ7RTU9 1775 aa26.07■■□□□ 1.76
XRCC3-204ENST00000553361 PTPRTO14522 1441 aa26.05■■□□□ 1.76
XRCC3-204ENST00000553361 PTPRKQ15262 1439 aa26.05■■□□□ 1.76
XRCC3-204ENST00000553361 CLTCQ00610 1675 aaKnown RBP26.04■■□□□ 1.76
XRCC3-204ENST00000553361 ADGBQ8N7X0 1667 aa26.04■■□□□ 1.76
XRCC3-204ENST00000553361 MROH2AA6NES4 1674 aa26.03■■□□□ 1.76
XRCC3-204ENST00000553361 APLP2Q06481 763 aa26.03■■□□□ 1.76
XRCC3-204ENST00000553361 NCKAP5LQ9HCH0 1330 aa26.03■■□□□ 1.76
XRCC3-204ENST00000553361 NCOA1Q15788 1441 aa26.03■■□□□ 1.76
XRCC3-204ENST00000553361 WASHC2CQ9Y4E1 1318 aa26.01■■□□□ 1.75
XRCC3-204ENST00000553361 FBXO31Q5XUX0 539 aaPredicted RBP25.99■■□□□ 1.75
XRCC3-204ENST00000553361 MAP3K1Q13233 1512 aa25.98■■□□□ 1.75
XRCC3-204ENST00000553361 CAMSAP1Q5T5Y3 1602 aa25.97■■□□□ 1.75
XRCC3-204ENST00000553361 ARHGEF5Q12774 1597 aa25.95■■□□□ 1.75
XRCC3-204ENST00000553361 MYOM3Q5VTT5 1437 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms