RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 HECW1Q76N89 1606 aa15.42■□□□□ 0.06
CHD8-203ENST00000553283 MLECQ14165 292 aa15.41■□□□□ 0.06
CHD8-203ENST00000553283 TROQ12816 1431 aaPredicted RBP15.4■□□□□ 0.06
CHD8-203ENST00000553283 PLPPR3Q6T4P5 718 aa15.39■□□□□ 0.05
CHD8-203ENST00000553283 PCF11O94913 1555 aaKnown RBP15.39■□□□□ 0.05
CHD8-203ENST00000553283 LMTK3Q96Q04 1460 aa15.39■□□□□ 0.05
CHD8-203ENST00000553283 ATP10AO60312 1499 aa15.38■□□□□ 0.05
CHD8-203ENST00000553283 CLIP1P30622 1438 aa15.37■□□□□ 0.05
CHD8-203ENST00000553283 AFAP1Q8N556 730 aa15.37■□□□□ 0.05
CHD8-203ENST00000553283 FBXO41Q8TF61 875 aa15.37■□□□□ 0.05
CHD8-203ENST00000553283 RIMS1Q86UR5 1692 aaKnown RBP15.37■□□□□ 0.05
CHD8-203ENST00000553283 HSPA2P54652 639 aa15.35■□□□□ 0.05
CHD8-203ENST00000553283 KIF14Q15058 1648 aa15.34■□□□□ 0.05
CHD8-203ENST00000553283 SIGLEC1Q9BZZ2 1709 aa15.34■□□□□ 0.05
CHD8-203ENST00000553283 C9orf84Q5VXU9 1444 aa15.34■□□□□ 0.05
CHD8-203ENST00000553283 MYO5CQ9NQX4 1742 aa15.33■□□□□ 0.04
CHD8-203ENST00000553283 CASKIN1Q8WXD9 1431 aa15.33■□□□□ 0.04
CHD8-203ENST00000553283 ZNF518AQ6AHZ1 1483 aa15.33■□□□□ 0.04
CHD8-203ENST00000553283 ARHGAP5Q13017 1502 aa15.33■□□□□ 0.04
CHD8-203ENST00000553283 MYT1LQ9UL68 1186 aa15.32■□□□□ 0.04
CHD8-203ENST00000553283 ARHGEF12Q9NZN5 1544 aa15.3■□□□□ 0.04
CHD8-203ENST00000553283 CEBPAP49715 358 aaPredicted RBP15.29■□□□□ 0.04
CHD8-203ENST00000553283 CCDC18Q5T9S5 1454 aa15.28■□□□□ 0.04
CHD8-203ENST00000553283 KDM5CP41229 1560 aa15.28■□□□□ 0.04
CHD8-203ENST00000553283 LRRIQ1Q96JM4 1722 aa15.27■□□□□ 0.04
CHD8-203ENST00000553283 MLH3Q9UHC1 1453 aa15.27■□□□□ 0.03
CHD8-203ENST00000553283 FER1L4A9Z1Z3 1794 aa15.26■□□□□ 0.03
CHD8-203ENST00000553283 TRAPPC8Q9Y2L5 1435 aa15.26■□□□□ 0.03
CHD8-203ENST00000553283 CDC42BPBQ9Y5S2 1711 aa15.23■□□□□ 0.03
CHD8-203ENST00000553283 FYCO1Q9BQS8 1478 aa15.22■□□□□ 0.03
CHD8-203ENST00000553283 ZNF777Q9ULD5 760 aaPredicted RBP15.22■□□□□ 0.03
CHD8-203ENST00000553283 DIP2CQ9Y2E4 1556 aa15.22■□□□□ 0.03
CHD8-203ENST00000553283 REREQ9P2R6 1566 aa15.21■□□□□ 0.03
CHD8-203ENST00000553283 ESF1Q9H501 851 aaKnown RBP15.21■□□□□ 0.03
CHD8-203ENST00000553283 ABCC1P33527 1531 aa15.21■□□□□ 0.03
CHD8-203ENST00000553283 PREX2Q70Z35 1606 aa15.21■□□□□ 0.02
CHD8-203ENST00000553283 CERKQ8TCT0 537 aa15.2■□□□□ 0.02
CHD8-203ENST00000553283 AGLP35573 1532 aa15.2■□□□□ 0.02
CHD8-203ENST00000553283 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
CHD8-203ENST00000553283 GPATCH8Q9UKJ3 1502 aaKnown RBP15.18■□□□□ 0.02
CHD8-203ENST00000553283 HNRNPMP52272 730 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHD8-203ENST00000553283 ABCA6Q8N139 1617 aa15.17■□□□□ 0.02
CHD8-203ENST00000553283 CFDP1Q9UEE9 299 aaPredicted RBP15.17■□□□□ 0.02
CHD8-203ENST00000553283 UHRF1BP1Q6BDS2 1440 aa15.17■□□□□ 0.02
CHD8-203ENST00000553283 SPAG9O60271 1321 aaKnown RBP15.17■□□□□ 0.02
CHD8-203ENST00000553283 SETD1BQ9UPS6 1966 aaKnown RBP15.16■□□□□ 0.02
CHD8-203ENST00000553283 PREX1Q8TCU6 1659 aa15.16■□□□□ 0.02
CHD8-203ENST00000553283 ITSN2Q9NZM3 1697 aa15.16■□□□□ 0.02
CHD8-203ENST00000553283 CDC42BPAQ5VT25 1732 aa15.14■□□□□ 0.01
CHD8-203ENST00000553283 CCNB3Q8WWL7 1395 aa15.14■□□□□ 0.01
CHD8-203ENST00000553283 KIAA1107Q9UPP5 1409 aa15.14■□□□□ 0.01
CHD8-203ENST00000553283 KIDINS220Q9ULH0 1771 aa15.13■□□□□ 0.01
CHD8-203ENST00000553283 SAMD9LQ8IVG5 1584 aa15.13■□□□□ 0.01
CHD8-203ENST00000553283 CNTLNQ9NXG0 1405 aa15.13■□□□□ 0.01
CHD8-203ENST00000553283 PLEKHH2Q8IVE3 1493 aa15.12■□□□□ 0.01
CHD8-203ENST00000553283 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
CHD8-203ENST00000553283 SYCP2Q9BX26 1530 aa15.11■□□□□ 0.01
CHD8-203ENST00000553283 ZMYM3Q14202 1370 aa15.1■□□□□ 0.01
CHD8-203ENST00000553283 C3P01024 1663 aa15.09■□□□□ 0.01
CHD8-203ENST00000553283 ZNF644Q9H582 1327 aaPredicted RBP15.08■□□□□ 0
CHD8-203ENST00000553283 STRCQ7RTU9 1775 aa15.08■□□□□ 0
CHD8-203ENST00000553283 PTPRTO14522 1441 aa15.08■□□□□ 0
CHD8-203ENST00000553283 NPATQ14207 1427 aa15.06■□□□□ 0
CHD8-203ENST00000553283 A2MP01023 1474 aa15.06■□□□□ 0
CHD8-203ENST00000553283 ATP7AQ04656 1500 aa15.06■□□□□ 0
CHD8-203ENST00000553283 GGT6Q6P531 493 aa15.05■□□□□ -0
CHD8-203ENST00000553283 PPP6R1Q9UPN7 881 aa15.05■□□□□ -0
CHD8-203ENST00000553283 NCOA1Q15788 1441 aa15.03■□□□□ -0
CHD8-203ENST00000553283 MBD5Q9P267 1494 aa15.02■□□□□ -0
CHD8-203ENST00000553283 CEP162Q5TB80 1403 aa15.02■□□□□ -0
CHD8-203ENST00000553283 PLXNC1O60486 1568 aa15.02□□□□□ -0.01
CHD8-203ENST00000553283 INO80Q9ULG1 1556 aaPredicted RBP15.02□□□□□ -0.01
CHD8-203ENST00000553283 SUPT6HQ7KZ85 1726 aaKnown RBP15.01□□□□□ -0.01
CHD8-203ENST00000553283 EHBP1L1Q8N3D4 1523 aa15.01□□□□□ -0.01
CHD8-203ENST00000553283 RTEL1-TNFRSF6BF6WH68 1400 aa15□□□□□ -0.01
CHD8-203ENST00000553283 MROH2AA6NES4 1674 aa15□□□□□ -0.01
CHD8-203ENST00000553283 TIAM1Q13009 1591 aa15□□□□□ -0.01
CHD8-203ENST00000553283 PTPRKQ15262 1439 aa15□□□□□ -0.01
CHD8-203ENST00000553283 RSPH4AQ5TD94 716 aa14.99□□□□□ -0.01
CHD8-203ENST00000553283 DHX29Q7Z478 1369 aaKnown RBP14.98□□□□□ -0.01
CHD8-203ENST00000553283 NCKAP5LQ9HCH0 1330 aa14.98□□□□□ -0.01
CHD8-203ENST00000553283 CAMSAP1Q5T5Y3 1602 aa14.97□□□□□ -0.01
CHD8-203ENST00000553283 PKD2Q13563 968 aa14.97□□□□□ -0.01
CHD8-203ENST00000553283 CLTCQ00610 1675 aaKnown RBP14.96□□□□□ -0.01
CHD8-203ENST00000553283 LTBP4Q8N2S1 1624 aa14.95□□□□□ -0.02
CHD8-203ENST00000553283 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
CHD8-203ENST00000553283 KIF3BO15066 747 aa14.95□□□□□ -0.02
CHD8-203ENST00000553283 ADGBQ8N7X0 1667 aa14.95□□□□□ -0.02
CHD8-203ENST00000553283 PLA2R1Q13018 1463 aa14.93□□□□□ -0.02
CHD8-203ENST00000553283 CCDC141Q6ZP82 1450 aa14.93□□□□□ -0.02
CHD8-203ENST00000553283 LOC105371045A0A1W2PR82 267 aa14.92□□□□□ -0.02
CHD8-203ENST00000553283 TSPY4P0CV99 314 aa14.92□□□□□ -0.02
CHD8-203ENST00000553283 TSPY10P0CW01 314 aa14.92□□□□□ -0.02
CHD8-203ENST00000553283 CAMSAP2Q08AD1 1489 aa14.92□□□□□ -0.02
CHD8-203ENST00000553283 IQSEC2Q5JU85 1478 aa14.92□□□□□ -0.02
CHD8-203ENST00000553283 ZNF335Q9H4Z2 1342 aaPredicted RBP14.92□□□□□ -0.02
CHD8-203ENST00000553283 FBXO31Q5XUX0 539 aaPredicted RBP14.91□□□□□ -0.02
CHD8-203ENST00000553283 WASHC2CQ9Y4E1 1318 aa14.91□□□□□ -0.02
CHD8-203ENST00000553283 CEP170BQ9Y4F5 1589 aaPredicted RBP14.9□□□□□ -0.02
CHD8-203ENST00000553283 TCOF1Q13428 1488 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms