RNA–Protein interactions for RNA: ENST00000552578.1

C12orf42-215, Transcript of chromosome 12 open reading frame 42, humanhuman

APPRIS ALT2 TSL 3

Gene C12orf42, Length 831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf42-215ENST00000552578 HECW1Q76N89 1606 aa30.29■■■□□ 2.44
C12orf42-215ENST00000552578 DISP3Q9P2K9 1392 aa30.28■■■□□ 2.44
C12orf42-215ENST00000552578 SCAPERQ9BY12 1400 aa30.28■■■□□ 2.44
C12orf42-215ENST00000552578 RANGAP1P46060 587 aaPredicted RBP30.27■■■□□ 2.44
C12orf42-215ENST00000552578 ATP10AO60312 1499 aa30.25■■■□□ 2.43
C12orf42-215ENST00000552578 PLCH2O75038 1416 aa30.25■■■□□ 2.43
C12orf42-215ENST00000552578 ARHGEF12Q9NZN5 1544 aa30.25■■■□□ 2.43
C12orf42-215ENST00000552578 CEBPAP49715 358 aaPredicted RBP30.22■■■□□ 2.43
C12orf42-215ENST00000552578 PREX1Q8TCU6 1659 aa30.21■■■□□ 2.43
C12orf42-215ENST00000552578 C9orf84Q5VXU9 1444 aa30.2■■■□□ 2.42
C12orf42-215ENST00000552578 STRCQ7RTU9 1775 aa30.19■■■□□ 2.42
C12orf42-215ENST00000552578 EFCAB2Q5VUJ9 269 aa30.17■■■□□ 2.42
C12orf42-215ENST00000552578 CDK13Q14004 1512 aaKnown RBP30.12■■■□□ 2.41
C12orf42-215ENST00000552578 UHRF1BP1Q6BDS2 1440 aa30.11■■■□□ 2.41
C12orf42-215ENST00000552578 EEA1Q15075 1411 aa30.1■■■□□ 2.41
C12orf42-215ENST00000552578 PTPRTO14522 1441 aa30.07■■■□□ 2.4
C12orf42-215ENST00000552578 SETD1BQ9UPS6 1966 aaKnown RBP30.07■■■□□ 2.4
C12orf42-215ENST00000552578 SPATA31D1Q6ZQQ2 1576 aa30.03■■■□□ 2.4
C12orf42-215ENST00000552578 AFAP1Q8N556 730 aa30.03■■■□□ 2.4
C12orf42-215ENST00000552578 ZNF518AQ6AHZ1 1483 aa30.03■■■□□ 2.4
C12orf42-215ENST00000552578 CDK11AQ9UQ88 783 aaPredicted RBP30.01■■■□□ 2.39
C12orf42-215ENST00000552578 MYO5CQ9NQX4 1742 aa30■■■□□ 2.39
C12orf42-215ENST00000552578 KDM5CP41229 1560 aa29.96■■■□□ 2.39
C12orf42-215ENST00000552578 ATP1B4Q9UN42 357 aaPredicted RBP29.94■■■□□ 2.38
C12orf42-215ENST00000552578 IQSEC2Q5JU85 1478 aa29.93■■■□□ 2.38
C12orf42-215ENST00000552578 MYT1LQ9UL68 1186 aa29.93■■■□□ 2.38
C12orf42-215ENST00000552578 REREQ9P2R6 1566 aa29.93■■■□□ 2.38
C12orf42-215ENST00000552578 KIF14Q15058 1648 aa29.93■■■□□ 2.38
C12orf42-215ENST00000552578 LTBP4Q8N2S1 1624 aa29.93■■■□□ 2.38
C12orf42-215ENST00000552578 C3P01024 1663 aa29.92■■■□□ 2.38
C12orf42-215ENST00000552578 DIP2CQ9Y2E4 1556 aa29.92■■■□□ 2.38
C12orf42-215ENST00000552578 TRAPPC8Q9Y2L5 1435 aa29.92■■■□□ 2.38
C12orf42-215ENST00000552578 FMN1Q68DA7 1419 aa29.9■■■□□ 2.38
C12orf42-215ENST00000552578 ESF1Q9H501 851 aaKnown RBP29.9■■■□□ 2.38
C12orf42-215ENST00000552578 MLH3Q9UHC1 1453 aa29.89■■■□□ 2.38
C12orf42-215ENST00000552578 AGLP35573 1532 aa29.87■■■□□ 2.37
C12orf42-215ENST00000552578 ARHGAP5Q13017 1502 aa29.87■■■□□ 2.37
C12orf42-215ENST00000552578 TROQ12816 1431 aaPredicted RBP29.87■■■□□ 2.37
C12orf42-215ENST00000552578 ABCA6Q8N139 1617 aa29.85■■■□□ 2.37
C12orf42-215ENST00000552578 NCOA1Q15788 1441 aa29.84■■■□□ 2.37
C12orf42-215ENST00000552578 CLIP1P30622 1438 aa29.8■■■□□ 2.36
C12orf42-215ENST00000552578 CNTLNQ9NXG0 1405 aa29.79■■■□□ 2.36
C12orf42-215ENST00000552578 CDC42BPBQ9Y5S2 1711 aa29.76■■■□□ 2.36
C12orf42-215ENST00000552578 ARHGAP35Q9NRY4 1499 aa29.75■■■□□ 2.35
C12orf42-215ENST00000552578 LRRIQ1Q96JM4 1722 aa29.74■■■□□ 2.35
C12orf42-215ENST00000552578 NPATQ14207 1427 aa29.73■■■□□ 2.35
C12orf42-215ENST00000552578 UBTFP17480 764 aaKnown RBP29.73■■■□□ 2.35
C12orf42-215ENST00000552578 ZMYM3Q14202 1370 aa29.68■■■□□ 2.34
C12orf42-215ENST00000552578 CAMSAP1Q5T5Y3 1602 aa29.68■■■□□ 2.34
C12orf42-215ENST00000552578 ABCC1P33527 1531 aa29.68■■■□□ 2.34
C12orf42-215ENST00000552578 NCKAP5LQ9HCH0 1330 aa29.68■■■□□ 2.34
C12orf42-215ENST00000552578 KIDINS220Q9ULH0 1771 aa29.67■■■□□ 2.34
C12orf42-215ENST00000552578 ITSN2Q9NZM3 1697 aa29.67■■■□□ 2.34
C12orf42-215ENST00000552578 UBAP1LF5GYI3 381 aa29.67■■■□□ 2.34
C12orf42-215ENST00000552578 ZNF335Q9H4Z2 1342 aaPredicted RBP29.66■■■□□ 2.34
C12orf42-215ENST00000552578 PREX2Q70Z35 1606 aa29.65■■■□□ 2.34
C12orf42-215ENST00000552578 PKD2Q13563 968 aa29.64■■■□□ 2.34
C12orf42-215ENST00000552578 MROH2AA6NES4 1674 aa29.6■■■□□ 2.33
C12orf42-215ENST00000552578 EHMT2Q96KQ7 1210 aa29.59■■■□□ 2.33
C12orf42-215ENST00000552578 PLA2R1Q13018 1463 aa29.57■■■□□ 2.32
C12orf42-215ENST00000552578 SAMD9LQ8IVG5 1584 aa29.53■■■□□ 2.32
C12orf42-215ENST00000552578 CDC42BPAQ5VT25 1732 aa29.53■■■□□ 2.32
C12orf42-215ENST00000552578 SPAG9O60271 1321 aaKnown RBP29.52■■■□□ 2.32
C12orf42-215ENST00000552578 TCOF1Q13428 1488 aaKnown RBP29.52■■■□□ 2.32
C12orf42-215ENST00000552578 CCDC18Q5T9S5 1454 aa29.51■■■□□ 2.31
C12orf42-215ENST00000552578 ZNF142P52746 1687 aaPredicted RBP29.5■■■□□ 2.31
C12orf42-215ENST00000552578 MYO3AQ8NEV4 1616 aa29.49■■■□□ 2.31
C12orf42-215ENST00000552578 PTPRKQ15262 1439 aa29.49■■■□□ 2.31
C12orf42-215ENST00000552578 CASKIN1Q8WXD9 1431 aa29.49■■■□□ 2.31
C12orf42-215ENST00000552578 ZNF777Q9ULD5 760 aaPredicted RBP29.49■■■□□ 2.31
C12orf42-215ENST00000552578 SUPT6HQ7KZ85 1726 aaKnown RBP29.48■■■□□ 2.31
C12orf42-215ENST00000552578 PPP6R1Q9UPN7 881 aa29.48■■■□□ 2.31
C12orf42-215ENST00000552578 CLTCQ00610 1675 aaKnown RBP29.47■■■□□ 2.31
C12orf42-215ENST00000552578 HNRNPMP52272 730 aaKnown RBP eCLIP29.47■■■□□ 2.31
C12orf42-215ENST00000552578 CEP170BQ9Y4F5 1589 aaPredicted RBP29.44■■■□□ 2.3
C12orf42-215ENST00000552578 GGT6Q6P531 493 aa29.42■■■□□ 2.3
C12orf42-215ENST00000552578 KIAA1107Q9UPP5 1409 aa29.42■■■□□ 2.3
C12orf42-215ENST00000552578 SYCP2Q9BX26 1530 aa29.41■■■□□ 2.3
C12orf42-215ENST00000552578 GPATCH8Q9UKJ3 1502 aaKnown RBP29.41■■■□□ 2.3
C12orf42-215ENST00000552578 HSPA1LP34931 641 aa29.41■■■□□ 2.3
C12orf42-215ENST00000552578 A2MP01023 1474 aa29.41■■■□□ 2.3
C12orf42-215ENST00000552578 PLXNC1O60486 1568 aa29.39■■■□□ 2.3
C12orf42-215ENST00000552578 TOM1O60784 492 aa29.39■■■□□ 2.3
C12orf42-215ENST00000552578 ATP7AQ04656 1500 aa29.38■■■□□ 2.29
C12orf42-215ENST00000552578 MED1Q15648 1581 aaPredicted RBP29.38■■■□□ 2.29
C12orf42-215ENST00000552578 A2ML1A8K2U0 1454 aa29.35■■■□□ 2.29
C12orf42-215ENST00000552578 PLEKHH2Q8IVE3 1493 aa29.35■■■□□ 2.29
C12orf42-215ENST00000552578 INO80Q9ULG1 1556 aaPredicted RBP29.35■■■□□ 2.29
C12orf42-215ENST00000552578 PIP4K2BP78356 416 aa29.34■■■□□ 2.29
C12orf42-215ENST00000552578 CFDP1Q9UEE9 299 aaPredicted RBP29.34■■■□□ 2.29
C12orf42-215ENST00000552578 SCAF1Q9H7N4 1312 aaKnown RBP29.32■■■□□ 2.28
C12orf42-215ENST00000552578 CPS1P31327 1500 aa29.3■■■□□ 2.28
C12orf42-215ENST00000552578 DNMT1P26358 1616 aaKnown RBP29.29■■■□□ 2.28
C12orf42-215ENST00000552578 FYCO1Q9BQS8 1478 aa29.28■■■□□ 2.28
C12orf42-215ENST00000552578 SHANK2Q9UPX8 1470 aa29.27■■■□□ 2.28
C12orf42-215ENST00000552578 NEURL4Q96JN8 1562 aa29.24■■■□□ 2.27
C12orf42-215ENST00000552578 CCNB3Q8WWL7 1395 aa29.24■■■□□ 2.27
C12orf42-215ENST00000552578 POLR1AO95602 1720 aaPredicted RBP29.23■■■□□ 2.27
C12orf42-215ENST00000552578 ANKLE2Q86XL3 938 aa29.21■■■□□ 2.27
C12orf42-215ENST00000552578 FBXO31Q5XUX0 539 aaPredicted RBP29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms