RNA–Protein interactions for RNA: ENST00000552430.5

LETMD1-232, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 608 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-232ENST00000552430 SEC24BO95487 1268 aa10.05□□□□□ -0.8
LETMD1-232ENST00000552430 RYDENQ9NUL5 291 aaKnown RBP10.05□□□□□ -0.8
LETMD1-232ENST00000552430 PLCG2P16885 1265 aa10.04□□□□□ -0.8
LETMD1-232ENST00000552430 TSHZ2Q9NRE2 1034 aa10.04□□□□□ -0.8
LETMD1-232ENST00000552430 POTEFA5A3E0 1075 aa10.03□□□□□ -0.8
LETMD1-232ENST00000552430 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
LETMD1-232ENST00000552430 ILDR1Q86SU0 546 aaPredicted RBP10.03□□□□□ -0.8
LETMD1-232ENST00000552430 C7P10643 843 aa10.02□□□□□ -0.81
LETMD1-232ENST00000552430 OCEL1Q9H607 264 aa10.02□□□□□ -0.81
LETMD1-232ENST00000552430 HMGXB3Q12766 1538 aa10.02□□□□□ -0.81
LETMD1-232ENST00000552430 BAZ1BQ9UIG0 1483 aaKnown RBP10□□□□□ -0.81
LETMD1-232ENST00000552430 PDS5BQ9NTI5 1447 aa9.98□□□□□ -0.81
LETMD1-232ENST00000552430 SMARCA4P51532 1647 aa9.97□□□□□ -0.81
LETMD1-232ENST00000552430 THOC2Q8NI27 1593 aaKnown RBP9.97□□□□□ -0.81
LETMD1-232ENST00000552430 LAMC3Q9Y6N6 1575 aa9.96□□□□□ -0.82
LETMD1-232ENST00000552430 CADPS2Q86UW7 1296 aa9.95□□□□□ -0.82
LETMD1-232ENST00000552430 MICALL2Q8IY33 904 aa9.93□□□□□ -0.82
LETMD1-232ENST00000552430 BOLA1Q9Y3E2 137 aa9.93□□□□□ -0.82
LETMD1-232ENST00000552430 BAZ1AQ9NRL2 1556 aaPredicted RBP9.92□□□□□ -0.82
LETMD1-232ENST00000552430 KIF21AQ7Z4S6 1674 aa9.91□□□□□ -0.82
LETMD1-232ENST00000552430 G3V3G9 751 aa9.9□□□□□ -0.82
LETMD1-232ENST00000552430 POTEB2H3BUK9 544 aa9.89□□□□□ -0.83
LETMD1-232ENST00000552430 L3MBTL3Q96JM7 780 aaPredicted RBP9.88□□□□□ -0.83
LETMD1-232ENST00000552430 KDM2AQ9Y2K7 1162 aa9.88□□□□□ -0.83
LETMD1-232ENST00000552430 POTEJP0CG39 1038 aa9.86□□□□□ -0.83
LETMD1-232ENST00000552430 TMEM121BQ9BXQ6 578 aaPredicted RBP9.86□□□□□ -0.83
LETMD1-232ENST00000552430 CADPSQ9ULU8 1353 aa9.86□□□□□ -0.83
LETMD1-232ENST00000552430 MRC2Q9UBG0 1479 aa9.85□□□□□ -0.83
LETMD1-232ENST00000552430 NCKAP5LQ9HCH0 1330 aa9.84□□□□□ -0.83
LETMD1-232ENST00000552430 PEG3Q9GZU2 1588 aa9.84□□□□□ -0.83
LETMD1-232ENST00000552430 C3orf67Q6ZVT6 689 aa9.83□□□□□ -0.84
LETMD1-232ENST00000552430 VSIG10Q8N0Z9 540 aa9.82□□□□□ -0.84
LETMD1-232ENST00000552430 TMEM92Q6UXU6 159 aa9.81□□□□□ -0.84
LETMD1-232ENST00000552430 MROH2BQ7Z745 1585 aa9.8□□□□□ -0.84
LETMD1-232ENST00000552430 WDR62O43379 1518 aa9.79□□□□□ -0.84
LETMD1-232ENST00000552430 LARP6Q9BRS8 491 aaKnown RBP9.79□□□□□ -0.84
LETMD1-232ENST00000552430 CRISPLD2Q9H0B8 497 aa9.79□□□□□ -0.84
LETMD1-232ENST00000552430 CEP164Q9UPV0 1460 aa9.79□□□□□ -0.84
LETMD1-232ENST00000552430 C2orf72A6NCS6 295 aa9.77□□□□□ -0.85
LETMD1-232ENST00000552430 TMC2Q8TDI7 906 aa9.77□□□□□ -0.85
LETMD1-232ENST00000552430 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.77□□□□□ -0.85
LETMD1-232ENST00000552430 PDE4AP27815 886 aa9.76□□□□□ -0.85
LETMD1-232ENST00000552430 GPHNQ9NQX3 736 aaPredicted RBP9.75□□□□□ -0.85
LETMD1-232ENST00000552430 FANCD2Q9BXW9 1451 aa9.74□□□□□ -0.85
LETMD1-232ENST00000552430 DDX27Q96GQ7 796 aaKnown RBP9.74□□□□□ -0.85
LETMD1-232ENST00000552430 KIF3CO14782 793 aa9.73□□□□□ -0.85
LETMD1-232ENST00000552430 DSG2Q14126 1118 aa9.73□□□□□ -0.85
LETMD1-232ENST00000552430 LHX8Q68G74 356 aa9.73□□□□□ -0.85
LETMD1-232ENST00000552430 SCUBE2Q9NQ36 999 aa9.73□□□□□ -0.85
LETMD1-232ENST00000552430 WDR70Q9NW82 654 aa9.73□□□□□ -0.85
LETMD1-232ENST00000552430 MFSD10Q14728 455 aa9.72□□□□□ -0.85
LETMD1-232ENST00000552430 PPP1R15BQ5SWA1 713 aa9.72□□□□□ -0.85
LETMD1-232ENST00000552430 SLAIN1Q8ND83 568 aa9.7□□□□□ -0.86
LETMD1-232ENST00000552430 CYB5RLQ6IPT4 315 aa9.69□□□□□ -0.86
LETMD1-232ENST00000552430 MAMSTRQ6ZN01 415 aa9.69□□□□□ -0.86
LETMD1-232ENST00000552430 OTUD5Q96G74 571 aa9.69□□□□□ -0.86
LETMD1-232ENST00000552430 WIZO95785 1651 aa9.68□□□□□ -0.86
LETMD1-232ENST00000552430 FOXK1P85037 733 aa9.68□□□□□ -0.86
LETMD1-232ENST00000552430 PLPP6Q8IY26 295 aa9.68□□□□□ -0.86
LETMD1-232ENST00000552430 RIMBP3CA6NJZ7 1639 aa9.67□□□□□ -0.86
LETMD1-232ENST00000552430 RIMBP3BA6NNM3 1639 aa9.67□□□□□ -0.86
LETMD1-232ENST00000552430 RIMBP3Q9UFD9 1639 aa9.67□□□□□ -0.86
LETMD1-232ENST00000552430 KCNV2Q8TDN2 545 aa9.67□□□□□ -0.86
LETMD1-232ENST00000552430 CFTRP13569 1480 aa9.66□□□□□ -0.86
LETMD1-232ENST00000552430 E2F4Q16254 413 aa9.64□□□□□ -0.87
LETMD1-232ENST00000552430 URB2Q14146 1524 aaKnown RBP9.63□□□□□ -0.87
LETMD1-232ENST00000552430 ARHGEF11O15085 1522 aa9.62□□□□□ -0.87
LETMD1-232ENST00000552430 EMILIN3Q9NT22 766 aa9.62□□□□□ -0.87
LETMD1-232ENST00000552430 UPF1Q92900 1129 aaKnown RBP eCLIP9.61□□□□□ -0.87
LETMD1-232ENST00000552430 CAMK2BQ13554 666 aa9.6□□□□□ -0.87
LETMD1-232ENST00000552430 P3H3Q8IVL6 736 aa9.59□□□□□ -0.87
LETMD1-232ENST00000552430 IFT140Q96RY7 1462 aa9.59□□□□□ -0.87
LETMD1-232ENST00000552430 ZNF608Q9ULD9 1512 aaPredicted RBP9.57□□□□□ -0.88
LETMD1-232ENST00000552430 DPYSL4O14531 572 aa9.57□□□□□ -0.88
LETMD1-232ENST00000552430 HOXB3P14651 431 aaPredicted RBP9.56□□□□□ -0.88
LETMD1-232ENST00000552430 TOP2AP11388 1531 aaKnown RBP9.53□□□□□ -0.88
LETMD1-232ENST00000552430 OXER1Q8TDS5 423 aa9.53□□□□□ -0.88
LETMD1-232ENST00000552430 ARHGEF1Q92888 912 aaKnown RBP9.53□□□□□ -0.88
LETMD1-232ENST00000552430 DOK7Q18PE1 504 aa9.52□□□□□ -0.89
LETMD1-232ENST00000552430 RSF1Q96T23 1441 aaPredicted RBP9.52□□□□□ -0.89
LETMD1-232ENST00000552430 MAP3K9P80192 1104 aa9.51□□□□□ -0.89
LETMD1-232ENST00000552430 NBR1Q14596 966 aa9.51□□□□□ -0.89
LETMD1-232ENST00000552430 KHSRPQ92945 711 aaKnown RBP eCLIP9.51□□□□□ -0.899e-6■■□□□ 14.4
LETMD1-232ENST00000552430 ABCC8Q09428 1581 aa9.5□□□□□ -0.89
LETMD1-232ENST00000552430 ZNF710Q8N1W2 664 aa9.5□□□□□ -0.89
LETMD1-232ENST00000552430 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
LETMD1-232ENST00000552430 ARAP1Q96P48 1450 aa9.5□□□□□ -0.89
LETMD1-232ENST00000552430 PRDM2Q13029 1718 aa9.5□□□□□ -0.89
LETMD1-232ENST00000552430 TOPBP1Q92547 1522 aa9.5□□□□□ -0.89
LETMD1-232ENST00000552430 AQRO60306 1485 aaKnown RBP eCLIP9.49□□□□□ -0.899e-11■□□□□ 10.1
LETMD1-232ENST00000552430 SLC34A2O95436 690 aa9.49□□□□□ -0.89
LETMD1-232ENST00000552430 PTCD2Q8WV60 388 aaKnown RBP9.49□□□□□ -0.89
LETMD1-232ENST00000552430 EIF4G3O43432 1585 aaKnown RBP9.49□□□□□ -0.89
LETMD1-232ENST00000552430 ARSIQ5FYB1 569 aa9.48□□□□□ -0.89
LETMD1-232ENST00000552430 CHD1O14646 1710 aa9.48□□□□□ -0.89
LETMD1-232ENST00000552430 SEMA3EO15041 775 aa9.47□□□□□ -0.89
LETMD1-232ENST00000552430 SNPHO15079 494 aa9.47□□□□□ -0.89
LETMD1-232ENST00000552430 CHMP7Q8WUX9 453 aaPredicted RBP9.47□□□□□ -0.89
LETMD1-232ENST00000552430 BCANQ96GW7 911 aa9.47□□□□□ -0.89
LETMD1-232ENST00000552430 ARIH1Q9Y4X5 557 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms