RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 CDC42BPBQ9Y5S2 1711 aa20.67■□□□□ 0.9
CDK4-212ENST00000552388 LRRC9Q6ZRR7 1453 aa20.67■□□□□ 0.9
CDK4-212ENST00000552388 CFAP74Q9C0B2 1584 aa20.67■□□□□ 0.9
CDK4-212ENST00000552388 PREX2Q70Z35 1606 aa20.66■□□□□ 0.9
CDK4-212ENST00000552388 PLCH2O75038 1416 aa20.65■□□□□ 0.9
CDK4-212ENST00000552388 APLP2Q06481 763 aa20.62■□□□□ 0.89
CDK4-212ENST00000552388 FANCAO15360 1455 aa20.61■□□□□ 0.89
CDK4-212ENST00000552388 BCORL1Q5H9F3 1711 aa20.61■□□□□ 0.89
CDK4-212ENST00000552388 ITSN2Q9NZM3 1697 aa20.61■□□□□ 0.89
CDK4-212ENST00000552388 PTPRMP28827 1452 aa20.6■□□□□ 0.89
CDK4-212ENST00000552388 ARHGEF40Q8TER5 1519 aa20.59■□□□□ 0.89
CDK4-212ENST00000552388 NCOA2Q15596 1464 aa20.58■□□□□ 0.89
CDK4-212ENST00000552388 KANK4Q5T7N3 995 aaPredicted RBP20.58■□□□□ 0.89
CDK4-212ENST00000552388 ARHGAP5Q13017 1502 aa20.58■□□□□ 0.88
CDK4-212ENST00000552388 GPATCH8Q9UKJ3 1502 aaKnown RBP20.58■□□□□ 0.88
CDK4-212ENST00000552388 RICTORQ6R327 1708 aa20.57■□□□□ 0.88
CDK4-212ENST00000552388 AKNAQ7Z591 1439 aa20.55■□□□□ 0.88
CDK4-212ENST00000552388 ZMYM4Q5VZL5 1548 aa20.54■□□□□ 0.88
CDK4-212ENST00000552388 MADDQ8WXG6 1647 aa20.54■□□□□ 0.88
CDK4-212ENST00000552388 CCNB3Q8WWL7 1395 aa20.54■□□□□ 0.88
CDK4-212ENST00000552388 EFCAB2Q5VUJ9 269 aa20.53■□□□□ 0.88
CDK4-212ENST00000552388 RAPGEF3O95398 923 aa20.5■□□□□ 0.87
CDK4-212ENST00000552388 SAMD9LQ8IVG5 1584 aa20.5■□□□□ 0.87
CDK4-212ENST00000552388 LMTK3Q96Q04 1460 aa20.49■□□□□ 0.87
CDK4-212ENST00000552388 ABCC1P33527 1531 aa20.48■□□□□ 0.87
CDK4-212ENST00000552388 DENND4BO75064 1496 aaPredicted RBP20.47■□□□□ 0.87
CDK4-212ENST00000552388 CFDP1Q9UEE9 299 aaPredicted RBP20.46■□□□□ 0.87
CDK4-212ENST00000552388 SIGLEC1Q9BZZ2 1709 aa20.46■□□□□ 0.87
CDK4-212ENST00000552388 SCAPERQ9BY12 1400 aa20.45■□□□□ 0.86
CDK4-212ENST00000552388 MYOM3Q5VTT5 1437 aa20.43■□□□□ 0.86
CDK4-212ENST00000552388 POGZQ7Z3K3 1410 aa20.43■□□□□ 0.86
CDK4-212ENST00000552388 PLEKHH2Q8IVE3 1493 aa20.42■□□□□ 0.86
CDK4-212ENST00000552388 ARHGEF12Q9NZN5 1544 aa20.42■□□□□ 0.86
CDK4-212ENST00000552388 MAGI2Q86UL8 1455 aa20.41■□□□□ 0.86
CDK4-212ENST00000552388 RIMS1Q86UR5 1692 aaKnown RBP20.41■□□□□ 0.86
CDK4-212ENST00000552388 KDM5CP41229 1560 aa20.4■□□□□ 0.86
CDK4-212ENST00000552388 MIA2Q96PC5 1412 aa20.4■□□□□ 0.86
CDK4-212ENST00000552388 SYCP2Q9BX26 1530 aa20.4■□□□□ 0.86
CDK4-212ENST00000552388 ZNF777Q9ULD5 760 aaPredicted RBP20.4■□□□□ 0.86
CDK4-212ENST00000552388 KIAA1107Q9UPP5 1409 aa20.4■□□□□ 0.86
CDK4-212ENST00000552388 ZNF518AQ6AHZ1 1483 aa20.39■□□□□ 0.85
CDK4-212ENST00000552388 ZFYVE16Q7Z3T8 1539 aa20.38■□□□□ 0.85
CDK4-212ENST00000552388 CAMSAP2Q08AD1 1489 aa20.38■□□□□ 0.85
CDK4-212ENST00000552388 FBXO41Q8TF61 875 aa20.38■□□□□ 0.85
CDK4-212ENST00000552388 YEATS2Q9ULM3 1422 aa20.36■□□□□ 0.85
CDK4-212ENST00000552388 TRAPPC8Q9Y2L5 1435 aa20.36■□□□□ 0.85
CDK4-212ENST00000552388 PTPN23Q9H3S7 1636 aa20.35■□□□□ 0.85
CDK4-212ENST00000552388 ZNF644Q9H582 1327 aaPredicted RBP20.35■□□□□ 0.85
CDK4-212ENST00000552388 MBD5Q9P267 1494 aa20.34■□□□□ 0.85
CDK4-212ENST00000552388 FGD6Q6ZV73 1430 aa20.33■□□□□ 0.84
CDK4-212ENST00000552388 ARHGEF5Q12774 1597 aa20.33■□□□□ 0.84
CDK4-212ENST00000552388 HNRNPMP52272 730 aaKnown RBP eCLIP20.31■□□□□ 0.84
CDK4-212ENST00000552388 AFAP1Q8N556 730 aa20.31■□□□□ 0.84
CDK4-212ENST00000552388 KIDINS220Q9ULH0 1771 aa20.31■□□□□ 0.84
CDK4-212ENST00000552388 TCOF1Q13428 1488 aaKnown RBP20.3■□□□□ 0.84
CDK4-212ENST00000552388 MLH3Q9UHC1 1453 aa20.3■□□□□ 0.84
CDK4-212ENST00000552388 FER1L4A9Z1Z3 1794 aa20.29■□□□□ 0.84
CDK4-212ENST00000552388 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
CDK4-212ENST00000552388 INO80Q9ULG1 1556 aaPredicted RBP20.29■□□□□ 0.84
CDK4-212ENST00000552388 CCDC141Q6ZP82 1450 aa20.27■□□□□ 0.84
CDK4-212ENST00000552388 ARID4BQ4LE39 1312 aaPredicted RBP20.27■□□□□ 0.83
CDK4-212ENST00000552388 RSPH4AQ5TD94 716 aa20.26■□□□□ 0.83
CDK4-212ENST00000552388 ABCA6Q8N139 1617 aa20.26■□□□□ 0.83
CDK4-212ENST00000552388 CROCC2H7BZ55 1655 aa20.26■□□□□ 0.83
CDK4-212ENST00000552388 ATP7AQ04656 1500 aa20.25■□□□□ 0.83
CDK4-212ENST00000552388 DIP2CQ9Y2E4 1556 aa20.25■□□□□ 0.83
CDK4-212ENST00000552388 DNMT1P26358 1616 aaKnown RBP20.24■□□□□ 0.83
CDK4-212ENST00000552388 C9orf84Q5VXU9 1444 aa20.24■□□□□ 0.83
CDK4-212ENST00000552388 REREQ9P2R6 1566 aa20.24■□□□□ 0.83
CDK4-212ENST00000552388 ATP10AO60312 1499 aa20.23■□□□□ 0.83
CDK4-212ENST00000552388 MAST1Q9Y2H9 1570 aa20.22■□□□□ 0.83
CDK4-212ENST00000552388 SPAG9O60271 1321 aaKnown RBP20.22■□□□□ 0.83
CDK4-212ENST00000552388 RTEL1-TNFRSF6BF6WH68 1400 aa20.21■□□□□ 0.83
CDK4-212ENST00000552388 ADGBQ8N7X0 1667 aa20.21■□□□□ 0.83
CDK4-212ENST00000552388 PREX1Q8TCU6 1659 aa20.2■□□□□ 0.82
CDK4-212ENST00000552388 MYT1LQ9UL68 1186 aa20.18■□□□□ 0.82
CDK4-212ENST00000552388 SHANK2Q9UPX8 1470 aa20.18■□□□□ 0.82
CDK4-212ENST00000552388 ABCC5O15440 1437 aa20.17■□□□□ 0.82
CDK4-212ENST00000552388 DAPK1P53355 1430 aa20.17■□□□□ 0.82
CDK4-212ENST00000552388 RRBP1Q9P2E9 1410 aaKnown RBP20.17■□□□□ 0.82
CDK4-212ENST00000552388 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.16■□□□□ 0.828e-9■■■□□ 17.4
CDK4-212ENST00000552388 TSPY4P0CV99 314 aa20.15■□□□□ 0.82
CDK4-212ENST00000552388 TSPY10P0CW01 314 aa20.15■□□□□ 0.82
CDK4-212ENST00000552388 PLXNC1O60486 1568 aa20.14■□□□□ 0.81
CDK4-212ENST00000552388 HSPA2P54652 639 aa20.14■□□□□ 0.81
CDK4-212ENST00000552388 FAM50AQ14320 339 aaKnown RBP20.14■□□□□ 0.81
CDK4-212ENST00000552388 AGLP35573 1532 aa20.12■□□□□ 0.81
CDK4-212ENST00000552388 STRCQ7RTU9 1775 aa20.11■□□□□ 0.81
CDK4-212ENST00000552388 A2MP01023 1474 aa20.1■□□□□ 0.81
CDK4-212ENST00000552388 ADGRL2O95490 1459 aa20.06■□□□□ 0.8
CDK4-212ENST00000552388 C3P01024 1663 aa20.05■□□□□ 0.8
CDK4-212ENST00000552388 DHX29Q7Z478 1369 aaKnown RBP20.05■□□□□ 0.8
CDK4-212ENST00000552388 PTPRKQ15262 1439 aa20.04■□□□□ 0.8
CDK4-212ENST00000552388 DUOX2Q9NRD8 1548 aa20.03■□□□□ 0.8
CDK4-212ENST00000552388 SETD1BQ9UPS6 1966 aaKnown RBP20.03■□□□□ 0.8
CDK4-212ENST00000552388 EIF2AK4Q9P2K8 1649 aaKnown RBP20.03■□□□□ 0.8
CDK4-212ENST00000552388 MLECQ14165 292 aa20.03■□□□□ 0.8
CDK4-212ENST00000552388 CERKQ8TCT0 537 aa20.03■□□□□ 0.8
CDK4-212ENST00000552388 NCOA1Q15788 1441 aa20.02■□□□□ 0.8
CDK4-212ENST00000552388 UHRF1BP1Q6BDS2 1440 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms