RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 CSRNP3Q8WYN3 585 aa25.86■■□□□ 1.73
BRF1-220ENST00000552127 ARHGEF12Q9NZN5 1544 aa25.85■■□□□ 1.73
BRF1-220ENST00000552127 NUP153P49790 1475 aaKnown RBP25.85■■□□□ 1.73
BRF1-220ENST00000552127 CEBPAP49715 358 aaPredicted RBP25.84■■□□□ 1.73
BRF1-220ENST00000552127 HECW1Q76N89 1606 aa25.84■■□□□ 1.73
BRF1-220ENST00000552127 SAMD9Q5K651 1589 aa25.83■■□□□ 1.73
BRF1-220ENST00000552127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.81■■□□□ 1.722e-7■■■■■ 33.4
BRF1-220ENST00000552127 PLEKHD1A6NEE1 506 aa25.78■■□□□ 1.72
BRF1-220ENST00000552127 UHRF1BP1Q6BDS2 1440 aa25.77■■□□□ 1.72
BRF1-220ENST00000552127 PTPRTO14522 1441 aa25.76■■□□□ 1.71
BRF1-220ENST00000552127 LTBP4Q8N2S1 1624 aa25.75■■□□□ 1.71
BRF1-220ENST00000552127 ATP10AO60312 1499 aa25.74■■□□□ 1.71
BRF1-220ENST00000552127 SETD1BQ9UPS6 1966 aaKnown RBP25.73■■□□□ 1.71
BRF1-220ENST00000552127 C9orf84Q5VXU9 1444 aa25.72■■□□□ 1.71
BRF1-220ENST00000552127 CHIC1Q5VXU3 224 aa25.72■■□□□ 1.71
BRF1-220ENST00000552127 SCAPERQ9BY12 1400 aa25.71■■□□□ 1.71
BRF1-220ENST00000552127 IQSEC2Q5JU85 1478 aa25.71■■□□□ 1.71
BRF1-220ENST00000552127 PLCH2O75038 1416 aa25.62■■□□□ 1.69
BRF1-220ENST00000552127 C3P01024 1663 aa25.6■■□□□ 1.69
BRF1-220ENST00000552127 RANGAP1P46060 587 aaPredicted RBP25.58■■□□□ 1.69
BRF1-220ENST00000552127 NCOA1Q15788 1441 aa25.55■■□□□ 1.68
BRF1-220ENST00000552127 UBAP1LF5GYI3 381 aa25.52■■□□□ 1.68
BRF1-220ENST00000552127 CDK13Q14004 1512 aaKnown RBP25.52■■□□□ 1.68
BRF1-220ENST00000552127 TRAPPC8Q9Y2L5 1435 aa25.51■■□□□ 1.67
BRF1-220ENST00000552127 EFCAB2Q5VUJ9 269 aa25.5■■□□□ 1.67
BRF1-220ENST00000552127 ZNF518AQ6AHZ1 1483 aa25.5■■□□□ 1.67
BRF1-220ENST00000552127 MYO5CQ9NQX4 1742 aa25.5■■□□□ 1.67
BRF1-220ENST00000552127 KDM5CP41229 1560 aa25.48■■□□□ 1.67
BRF1-220ENST00000552127 DIP2CQ9Y2E4 1556 aa25.48■■□□□ 1.67
BRF1-220ENST00000552127 AFAP1Q8N556 730 aa25.47■■□□□ 1.67
BRF1-220ENST00000552127 REREQ9P2R6 1566 aa25.47■■□□□ 1.67
BRF1-220ENST00000552127 MYT1LQ9UL68 1186 aa25.46■■□□□ 1.67
BRF1-220ENST00000552127 CAMSAP1Q5T5Y3 1602 aa25.45■■□□□ 1.67
BRF1-220ENST00000552127 ZNF335Q9H4Z2 1342 aaPredicted RBP25.45■■□□□ 1.66
BRF1-220ENST00000552127 ESF1Q9H501 851 aaKnown RBP25.45■■□□□ 1.66
BRF1-220ENST00000552127 ABCA6Q8N139 1617 aa25.42■■□□□ 1.66
BRF1-220ENST00000552127 MED1Q15648 1581 aaPredicted RBP25.41■■□□□ 1.66
BRF1-220ENST00000552127 NCKAP5LQ9HCH0 1330 aa25.38■■□□□ 1.65
BRF1-220ENST00000552127 AGLP35573 1532 aa25.38■■□□□ 1.65
BRF1-220ENST00000552127 UBTFP17480 764 aaKnown RBP25.38■■□□□ 1.65
BRF1-220ENST00000552127 EHMT2Q96KQ7 1210 aa25.38■■□□□ 1.65
BRF1-220ENST00000552127 ARHGAP5Q13017 1502 aa25.37■■□□□ 1.65
BRF1-220ENST00000552127 KIF14Q15058 1648 aa25.36■■□□□ 1.65
BRF1-220ENST00000552127 MLH3Q9UHC1 1453 aa25.34■■□□□ 1.65
BRF1-220ENST00000552127 CNTLNQ9NXG0 1405 aa25.34■■□□□ 1.65
BRF1-220ENST00000552127 HSPA1LP34931 641 aa25.32■■□□□ 1.64
BRF1-220ENST00000552127 ARHGAP35Q9NRY4 1499 aa25.32■■□□□ 1.64
BRF1-220ENST00000552127 NPATQ14207 1427 aa25.31■■□□□ 1.64
BRF1-220ENST00000552127 MROH2AA6NES4 1674 aa25.28■■□□□ 1.64
BRF1-220ENST00000552127 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
BRF1-220ENST00000552127 ATP1B4Q9UN42 357 aaPredicted RBP25.27■■□□□ 1.64
BRF1-220ENST00000552127 PKD2Q13563 968 aa25.26■■□□□ 1.63
BRF1-220ENST00000552127 SUPT6HQ7KZ85 1726 aaKnown RBP25.26■■□□□ 1.63
BRF1-220ENST00000552127 PIP4K2BP78356 416 aa25.25■■□□□ 1.63
BRF1-220ENST00000552127 CDK11AQ9UQ88 783 aaPredicted RBP25.25■■□□□ 1.63
BRF1-220ENST00000552127 FMN1Q68DA7 1419 aa25.25■■□□□ 1.63
BRF1-220ENST00000552127 PLA2R1Q13018 1463 aa25.25■■□□□ 1.63
BRF1-220ENST00000552127 CDC42BPBQ9Y5S2 1711 aa25.25■■□□□ 1.63
BRF1-220ENST00000552127 ZNF142P52746 1687 aaPredicted RBP25.24■■□□□ 1.63
BRF1-220ENST00000552127 ZMYM3Q14202 1370 aa25.24■■□□□ 1.63
BRF1-220ENST00000552127 KIDINS220Q9ULH0 1771 aa25.23■■□□□ 1.63
BRF1-220ENST00000552127 TCOF1Q13428 1488 aaKnown RBP25.23■■□□□ 1.63
BRF1-220ENST00000552127 MYO3AQ8NEV4 1616 aa25.22■■□□□ 1.63
BRF1-220ENST00000552127 TROQ12816 1431 aaPredicted RBP25.21■■□□□ 1.63
BRF1-220ENST00000552127 PHF23Q9BUL5 403 aaPredicted RBP25.21■■□□□ 1.63
BRF1-220ENST00000552127 ITSN2Q9NZM3 1697 aa25.2■■□□□ 1.63
BRF1-220ENST00000552127 ABCC1P33527 1531 aa25.2■■□□□ 1.62
BRF1-220ENST00000552127 LRRIQ1Q96JM4 1722 aa25.2■■□□□ 1.62
BRF1-220ENST00000552127 PPP6R1Q9UPN7 881 aa25.19■■□□□ 1.62
BRF1-220ENST00000552127 CEP170BQ9Y4F5 1589 aaPredicted RBP25.18■■□□□ 1.62
BRF1-220ENST00000552127 TOM1O60784 492 aa25.17■■□□□ 1.62
BRF1-220ENST00000552127 CLIP1P30622 1438 aa25.16■■□□□ 1.62
BRF1-220ENST00000552127 CLTCQ00610 1675 aaKnown RBP25.15■■□□□ 1.62
BRF1-220ENST00000552127 PREX2Q70Z35 1606 aa25.14■■□□□ 1.61
BRF1-220ENST00000552127 PTPRKQ15262 1439 aa25.11■■□□□ 1.61
BRF1-220ENST00000552127 CPS1P31327 1500 aa25.1■■□□□ 1.61
BRF1-220ENST00000552127 SAMD9LQ8IVG5 1584 aa25.06■■□□□ 1.6
BRF1-220ENST00000552127 SHANK2Q9UPX8 1470 aa25.04■■□□□ 1.6
BRF1-220ENST00000552127 DNMT1P26358 1616 aaKnown RBP25.03■■□□□ 1.6
BRF1-220ENST00000552127 POLR1AO95602 1720 aaPredicted RBP25.03■■□□□ 1.6
BRF1-220ENST00000552127 ALKQ9UM73 1620 aa25.02■■□□□ 1.6
BRF1-220ENST00000552127 CASKIN1Q8WXD9 1431 aa25.02■■□□□ 1.6
BRF1-220ENST00000552127 CDC42BPAQ5VT25 1732 aa25.01■■□□□ 1.59
BRF1-220ENST00000552127 A2ML1A8K2U0 1454 aa25.01■■□□□ 1.59
BRF1-220ENST00000552127 NEURL4Q96JN8 1562 aa25.01■■□□□ 1.59
BRF1-220ENST00000552127 CCDC18Q5T9S5 1454 aa25■■□□□ 1.59
BRF1-220ENST00000552127 PLXNC1O60486 1568 aa24.99■■□□□ 1.59
BRF1-220ENST00000552127 FYCO1Q9BQS8 1478 aa24.99■■□□□ 1.59
BRF1-220ENST00000552127 SPAG9O60271 1321 aaKnown RBP24.98■■□□□ 1.59
BRF1-220ENST00000552127 GGT6Q6P531 493 aa24.97■■□□□ 1.59
BRF1-220ENST00000552127 SENP3Q9H4L4 574 aaPredicted RBP24.96■■□□□ 1.59
BRF1-220ENST00000552127 ATP7AQ04656 1500 aa24.95■■□□□ 1.58
BRF1-220ENST00000552127 SYCP2Q9BX26 1530 aa24.95■■□□□ 1.58
BRF1-220ENST00000552127 A2MP01023 1474 aa24.95■■□□□ 1.58
BRF1-220ENST00000552127 VWDEQ8N2E2 1590 aa24.94■■□□□ 1.58
BRF1-220ENST00000552127 ZNF777Q9ULD5 760 aaPredicted RBP24.94■■□□□ 1.58
BRF1-220ENST00000552127 RGS17Q9UGC6 210 aaPredicted RBP24.93■■□□□ 1.58
BRF1-220ENST00000552127 HNRNPMP52272 730 aaKnown RBP eCLIP24.91■■□□□ 1.582e-7■■■■■ 35.3
BRF1-220ENST00000552127 INO80Q9ULG1 1556 aaPredicted RBP24.9■■□□□ 1.58
BRF1-220ENST00000552127 CEP162Q5TB80 1403 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms