RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 ST18O60284 1047 aa11.54□□□□□ -0.56
RAB3IP-214ENST00000550847 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
RAB3IP-214ENST00000550847 PAXIP1Q6ZW49 1069 aaPredicted RBP11.52□□□□□ -0.57
RAB3IP-214ENST00000550847 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.52□□□□□ -0.57
RAB3IP-214ENST00000550847 SPRYD3Q8NCJ5 442 aa11.51□□□□□ -0.57
RAB3IP-214ENST00000550847 NCKAP5LQ9HCH0 1330 aa11.51□□□□□ -0.57
RAB3IP-214ENST00000550847 SNPHO15079 494 aa11.5□□□□□ -0.57
RAB3IP-214ENST00000550847 TMC2Q8TDI7 906 aa11.5□□□□□ -0.57
RAB3IP-214ENST00000550847 CFAP44Q96MT7 982 aa11.5□□□□□ -0.57
RAB3IP-214ENST00000550847 CRISPLD2Q9H0B8 497 aa11.49□□□□□ -0.57
RAB3IP-214ENST00000550847 GPHNQ9NQX3 736 aaPredicted RBP11.49□□□□□ -0.57
RAB3IP-214ENST00000550847 DSG2Q14126 1118 aa11.46□□□□□ -0.57
RAB3IP-214ENST00000550847 FOXK1P85037 733 aa11.44□□□□□ -0.58
RAB3IP-214ENST00000550847 POTEGQ6S5H5 508 aa11.44□□□□□ -0.58
RAB3IP-214ENST00000550847 POTEMA6NI47 508 aa11.43□□□□□ -0.58
RAB3IP-214ENST00000550847 DOK7Q18PE1 504 aa11.43□□□□□ -0.58
RAB3IP-214ENST00000550847 MARVELD3Q96A59 401 aa11.42□□□□□ -0.58
RAB3IP-214ENST00000550847 PLPP6Q8IY26 295 aa11.41□□□□□ -0.58
RAB3IP-214ENST00000550847 GPR153Q6NV75 609 aa11.39□□□□□ -0.59
RAB3IP-214ENST00000550847 ZNF710Q8N1W2 664 aa11.39□□□□□ -0.59
RAB3IP-214ENST00000550847 KHSRPQ92945 711 aaKnown RBP eCLIP11.39□□□□□ -0.59
RAB3IP-214ENST00000550847 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
RAB3IP-214ENST00000550847 HOXB1P14653 301 aaPredicted RBP11.38□□□□□ -0.59
RAB3IP-214ENST00000550847 PDE4AP27815 886 aa11.37□□□□□ -0.59
RAB3IP-214ENST00000550847 MFSD10Q14728 455 aa11.37□□□□□ -0.59
RAB3IP-214ENST00000550847 PPP1R15BQ5SWA1 713 aa11.37□□□□□ -0.59
RAB3IP-214ENST00000550847 ARSIQ5FYB1 569 aa11.36□□□□□ -0.59
RAB3IP-214ENST00000550847 SLC34A2O95436 690 aa11.35□□□□□ -0.59
RAB3IP-214ENST00000550847 POTEB3A0JP26 581 aa11.34□□□□□ -0.59
RAB3IP-214ENST00000550847 RIMBP2O15034 1052 aa11.34□□□□□ -0.59
RAB3IP-214ENST00000550847 POTEBQ6S5H4 581 aa11.34□□□□□ -0.59
RAB3IP-214ENST00000550847 ZSWIM6Q9HCJ5 1215 aa11.34□□□□□ -0.59
RAB3IP-214ENST00000550847 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
RAB3IP-214ENST00000550847 EMP3P54852 163 aa11.33□□□□□ -0.6
RAB3IP-214ENST00000550847 DDX27Q96GQ7 796 aaKnown RBP11.33□□□□□ -0.6
RAB3IP-214ENST00000550847 PCDHGA4Q9Y5G9 962 aa11.33□□□□□ -0.6
RAB3IP-214ENST00000550847 PLCB2Q00722 1185 aa11.3□□□□□ -0.6
RAB3IP-214ENST00000550847 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
RAB3IP-214ENST00000550847 FAM205CA6NFA0 338 aa11.28□□□□□ -0.6
RAB3IP-214ENST00000550847 NUDT7P0C024 238 aa11.28□□□□□ -0.6
RAB3IP-214ENST00000550847 KDM4FA0A1W2PPD8 638 aa11.27□□□□□ -0.61
RAB3IP-214ENST00000550847 OXER1Q8TDS5 423 aa11.27□□□□□ -0.61
RAB3IP-214ENST00000550847 UPF1Q92900 1129 aaKnown RBP eCLIP11.27□□□□□ -0.61
RAB3IP-214ENST00000550847 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.61
RAB3IP-214ENST00000550847 HS3ST6Q96QI5 342 aa11.26□□□□□ -0.61
RAB3IP-214ENST00000550847 ERBB3P21860 1342 aa11.22□□□□□ -0.61
RAB3IP-214ENST00000550847 CAMK2BQ13554 666 aa11.22□□□□□ -0.61
RAB3IP-214ENST00000550847 VARS2Q5ST30 1063 aaKnown RBP11.22□□□□□ -0.61
RAB3IP-214ENST00000550847 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
RAB3IP-214ENST00000550847 LHX6Q9UPM6 363 aa11.21□□□□□ -0.61
RAB3IP-214ENST00000550847 ZNF316A6NFI3 1004 aaPredicted RBP11.2□□□□□ -0.62
RAB3IP-214ENST00000550847 TBC1D12O60347 775 aa11.15□□□□□ -0.62
RAB3IP-214ENST00000550847 KRTAP3-3Q9BYR6 98 aa11.15□□□□□ -0.62
RAB3IP-214ENST00000550847 KRTAP3-2Q9BYR7 98 aa11.15□□□□□ -0.62
RAB3IP-214ENST00000550847 DPYSL4O14531 572 aa11.14□□□□□ -0.63
RAB3IP-214ENST00000550847 EVI5O60447 810 aa11.12□□□□□ -0.63
RAB3IP-214ENST00000550847 PCDH10Q9P2E7 1040 aa11.12□□□□□ -0.63
RAB3IP-214ENST00000550847 HAP1P54257 671 aaPredicted RBP11.11□□□□□ -0.63
RAB3IP-214ENST00000550847 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
RAB3IP-214ENST00000550847 E2F4Q16254 413 aa11.11□□□□□ -0.63
RAB3IP-214ENST00000550847 POTEEQ6S8J3 1075 aa11.1□□□□□ -0.63
RAB3IP-214ENST00000550847 ZNF687Q8N1G0 1237 aa11.1□□□□□ -0.63
RAB3IP-214ENST00000550847 ANO8Q9HCE9 1232 aaPredicted RBP11.1□□□□□ -0.63
RAB3IP-214ENST00000550847 WDR70Q9NW82 654 aa11.1□□□□□ -0.63
RAB3IP-214ENST00000550847 KDM2AQ9Y2K7 1162 aa11.06□□□□□ -0.64
RAB3IP-214ENST00000550847 KCNV2Q8TDN2 545 aa11.05□□□□□ -0.64
RAB3IP-214ENST00000550847 FOSBP53539 338 aa11.03□□□□□ -0.64
RAB3IP-214ENST00000550847 ZNF454Q8N9F8 522 aa11.03□□□□□ -0.64
RAB3IP-214ENST00000550847 AXIN2Q9Y2T1 843 aa11.03□□□□□ -0.64
RAB3IP-214ENST00000550847 ARIH1Q9Y4X5 557 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-214ENST00000550847 PDIA6Q15084 440 aa11.02□□□□□ -0.65
RAB3IP-214ENST00000550847 PSDA5PKW4 1024 aaPredicted RBP11.01□□□□□ -0.65
RAB3IP-214ENST00000550847 JPH4Q96JJ6 628 aa11.01□□□□□ -0.65
RAB3IP-214ENST00000550847 PPP4R3BQ5MIZ7 849 aa11□□□□□ -0.65
RAB3IP-214ENST00000550847 PCDHGA10Q9Y5H3 936 aa11□□□□□ -0.65
RAB3IP-214ENST00000550847 PSEN2P49810 448 aa10.97□□□□□ -0.65
RAB3IP-214ENST00000550847 DDX12PQ92771 950 aa10.97□□□□□ -0.65
RAB3IP-214ENST00000550847 ADAM33Q9BZ11 813 aa10.96□□□□□ -0.65
RAB3IP-214ENST00000550847 PBX2P40425 430 aa10.95□□□□□ -0.66
RAB3IP-214ENST00000550847 PTGER2P43116 358 aa10.95□□□□□ -0.66
RAB3IP-214ENST00000550847 DMRTA1Q5VZB9 504 aa10.95□□□□□ -0.66
RAB3IP-214ENST00000550847 SPNS2Q8IVW8 549 aa10.95□□□□□ -0.66
RAB3IP-214ENST00000550847 ARHGAP33O14559 1287 aa10.94□□□□□ -0.66
RAB3IP-214ENST00000550847 LSM11P83369 360 aaKnown RBP eCLIP10.94□□□□□ -0.66
RAB3IP-214ENST00000550847 ZDHHC16Q969W1 377 aa10.94□□□□□ -0.66
RAB3IP-214ENST00000550847 PLSCR2Q9NRY7 297 aa10.94□□□□□ -0.66
RAB3IP-214ENST00000550847 SPDYE16A6NNV3 312 aaPredicted RBP10.93□□□□□ -0.66
RAB3IP-214ENST00000550847 PHF14O94880 888 aa10.93□□□□□ -0.66
RAB3IP-214ENST00000550847 ARHGEF1Q92888 912 aaKnown RBP10.93□□□□□ -0.66
RAB3IP-214ENST00000550847 KCNK17Q96T54 332 aa10.93□□□□□ -0.66
RAB3IP-214ENST00000550847 BCL2L12Q9HB09 334 aa10.93□□□□□ -0.66
RAB3IP-214ENST00000550847 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
RAB3IP-214ENST00000550847 ANKRD13DQ6ZTN6 518 aa10.91□□□□□ -0.66
RAB3IP-214ENST00000550847 TYW1BQ6NUM6 668 aa10.9□□□□□ -0.66
RAB3IP-214ENST00000550847 VSIG10Q8N0Z9 540 aa10.9□□□□□ -0.66
RAB3IP-214ENST00000550847 SLC24A1O60721 1099 aa10.89□□□□□ -0.67
RAB3IP-214ENST00000550847 NBR1Q14596 966 aa10.88□□□□□ -0.67
RAB3IP-214ENST00000550847 GRXCR2A6NFK2 248 aa10.87□□□□□ -0.67
RAB3IP-214ENST00000550847 MLLT3P42568 568 aaPredicted RBP10.87□□□□□ -0.67
RAB3IP-214ENST00000550847 P3H3Q8IVL6 736 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms