RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PDE4DQ08499 809 aa11.39□□□□□ -0.59
TGFBR1-208ENST00000550253 PPP1R15BQ5SWA1 713 aa11.38□□□□□ -0.59
TGFBR1-208ENST00000550253 GPHNQ9NQX3 736 aaPredicted RBP11.38□□□□□ -0.59
TGFBR1-208ENST00000550253 GOLGA2Q08379 1002 aa11.36□□□□□ -0.59
TGFBR1-208ENST00000550253 TMEM106CQ9BVX2 250 aa11.36□□□□□ -0.59
TGFBR1-208ENST00000550253 ZRANB1Q9UGI0 708 aa11.35□□□□□ -0.59
TGFBR1-208ENST00000550253 PHF12Q96QT6 1004 aa11.34□□□□□ -0.59
TGFBR1-208ENST00000550253 EMILIN3Q9NT22 766 aa11.34□□□□□ -0.59
TGFBR1-208ENST00000550253 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
TGFBR1-208ENST00000550253 DPYSL4O14531 572 aa11.33□□□□□ -0.6
TGFBR1-208ENST00000550253 PDIA6Q15084 440 aa11.33□□□□□ -0.6
TGFBR1-208ENST00000550253 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
TGFBR1-208ENST00000550253 GPR37O15354 613 aa11.32□□□□□ -0.6
TGFBR1-208ENST00000550253 MKRN3Q13064 507 aaKnown RBP11.32□□□□□ -0.6
TGFBR1-208ENST00000550253 RSPH6AQ9H0K4 717 aa11.32□□□□□ -0.6
TGFBR1-208ENST00000550253 UBTFP17480 764 aaKnown RBP11.31□□□□□ -0.6
TGFBR1-208ENST00000550253 TRPC6Q9Y210 931 aa11.3□□□□□ -0.6
TGFBR1-208ENST00000550253 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
TGFBR1-208ENST00000550253 FAM117AQ9C073 453 aa11.28□□□□□ -0.6
TGFBR1-208ENST00000550253 RB1CC1Q8TDY2 1594 aa11.28□□□□□ -0.6
TGFBR1-208ENST00000550253 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
TGFBR1-208ENST00000550253 DSG2Q14126 1118 aa11.27□□□□□ -0.61
TGFBR1-208ENST00000550253 MINK1Q8N4C8 1332 aaPredicted RBP11.24□□□□□ -0.61
TGFBR1-208ENST00000550253 MS4A3Q96HJ5 214 aa11.24□□□□□ -0.61
TGFBR1-208ENST00000550253 ZNF316A6NFI3 1004 aaPredicted RBP11.23□□□□□ -0.61
TGFBR1-208ENST00000550253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.61
TGFBR1-208ENST00000550253 PLEKHG3A1L390 1219 aa11.22□□□□□ -0.61
TGFBR1-208ENST00000550253 FOXK1P85037 733 aa11.22□□□□□ -0.61
TGFBR1-208ENST00000550253 PODXL2Q9NZ53 605 aa11.22□□□□□ -0.61
TGFBR1-208ENST00000550253 MAP2K5Q13163 448 aa11.19□□□□□ -0.62
TGFBR1-208ENST00000550253 CHRDL2Q6WN34 429 aa11.19□□□□□ -0.62
TGFBR1-208ENST00000550253 IRF6O14896 467 aa11.19□□□□□ -0.62
TGFBR1-208ENST00000550253 TIE1P35590 1138 aa11.19□□□□□ -0.62
TGFBR1-208ENST00000550253 AMHR2Q16671 573 aa11.19□□□□□ -0.62
TGFBR1-208ENST00000550253 CCDC102AQ96A19 550 aa11.19□□□□□ -0.62
TGFBR1-208ENST00000550253 DDRGK1Q96HY6 314 aa11.19□□□□□ -0.62
TGFBR1-208ENST00000550253 C1orf115Q9H7X2 142 aa11.19□□□□□ -0.62
TGFBR1-208ENST00000550253 TTLL13PA6NNM8 815 aa11.18□□□□□ -0.62
TGFBR1-208ENST00000550253 DPY19L2Q6NUT2 758 aa11.17□□□□□ -0.62
TGFBR1-208ENST00000550253 UNC13AQ9UPW8 1703 aa11.17□□□□□ -0.62
TGFBR1-208ENST00000550253 PARP9Q8IXQ6 854 aa11.16□□□□□ -0.62
TGFBR1-208ENST00000550253 MICALL2Q8IY33 904 aa11.16□□□□□ -0.62
TGFBR1-208ENST00000550253 TMC2Q8TDI7 906 aa11.16□□□□□ -0.62
TGFBR1-208ENST00000550253 NACADO15069 1562 aa11.15□□□□□ -0.62
TGFBR1-208ENST00000550253 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
TGFBR1-208ENST00000550253 GRXCR2A6NFK2 248 aa11.14□□□□□ -0.63
TGFBR1-208ENST00000550253 PLPP6Q8IY26 295 aa11.14□□□□□ -0.63
TGFBR1-208ENST00000550253 GNPATO15228 680 aa11.13□□□□□ -0.63
TGFBR1-208ENST00000550253 OSBPP22059 807 aa11.13□□□□□ -0.63
TGFBR1-208ENST00000550253 TRIM26Q12899 539 aaPredicted RBP11.12□□□□□ -0.63
TGFBR1-208ENST00000550253 FLIIQ13045 1269 aa11.11□□□□□ -0.63
TGFBR1-208ENST00000550253 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
TGFBR1-208ENST00000550253 KIF3CO14782 793 aa11.1□□□□□ -0.63
TGFBR1-208ENST00000550253 FECHP22830 423 aa11.1□□□□□ -0.63
TGFBR1-208ENST00000550253 ARID3AQ99856 593 aa11.1□□□□□ -0.63
TGFBR1-208ENST00000550253 GOPCQ9HD26 462 aa11.1□□□□□ -0.63
TGFBR1-208ENST00000550253 ONECUT3O60422 494 aaPredicted RBP11.09□□□□□ -0.63
TGFBR1-208ENST00000550253 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
TGFBR1-208ENST00000550253 HIC1Q14526 733 aa11.09□□□□□ -0.63
TGFBR1-208ENST00000550253 TRIM35Q9UPQ4 493 aa11.09□□□□□ -0.63
TGFBR1-208ENST00000550253 C2orf72A6NCS6 295 aa11.09□□□□□ -0.63
TGFBR1-208ENST00000550253 PTGER2P43116 358 aa11.08□□□□□ -0.64
TGFBR1-208ENST00000550253 PDCD7Q8N8D1 485 aaKnown RBP11.08□□□□□ -0.64
TGFBR1-208ENST00000550253 TMEM121BQ9BXQ6 578 aaPredicted RBP11.08□□□□□ -0.64
TGFBR1-208ENST00000550253 ARID3CA6NKF2 412 aa11.07□□□□□ -0.64
TGFBR1-208ENST00000550253 FCHSD2O94868 740 aa11.07□□□□□ -0.64
TGFBR1-208ENST00000550253 HRCP23327 699 aa11.07□□□□□ -0.64
TGFBR1-208ENST00000550253 APBB1O00213 710 aa11.05□□□□□ -0.64
TGFBR1-208ENST00000550253 BICRAQ9NZM4 1560 aa11.05□□□□□ -0.64
TGFBR1-208ENST00000550253 C19orf67A6NJJ6 358 aa11.04□□□□□ -0.64
TGFBR1-208ENST00000550253 TTLL12Q14166 644 aaPredicted RBP11.02□□□□□ -0.65
TGFBR1-208ENST00000550253 PRIM1P49642 420 aaKnown RBP11.01□□□□□ -0.65
TGFBR1-208ENST00000550253 OXER1Q8TDS5 423 aa11.01□□□□□ -0.65
TGFBR1-208ENST00000550253 DDX12PQ92771 950 aa11.01□□□□□ -0.65
TGFBR1-208ENST00000550253 BOLA1Q9Y3E2 137 aa11.01□□□□□ -0.65
TGFBR1-208ENST00000550253 A6NJR5 290 aa11□□□□□ -0.65
TGFBR1-208ENST00000550253 MS4A1P11836 297 aa11□□□□□ -0.65
TGFBR1-208ENST00000550253 PTGDRQ13258 359 aa11□□□□□ -0.65
TGFBR1-208ENST00000550253 GIGYF2Q6Y7W6 1299 aaKnown RBP11□□□□□ -0.65
TGFBR1-208ENST00000550253 UPF1Q92900 1129 aaKnown RBP eCLIP11□□□□□ -0.65
TGFBR1-208ENST00000550253 IRX5P78411 483 aaPredicted RBP10.99□□□□□ -0.65
TGFBR1-208ENST00000550253 REPIN1Q9BWE0 567 aaKnown RBP10.99□□□□□ -0.65
TGFBR1-208ENST00000550253 PCMTD1Q96MG8 357 aaPredicted RBP10.97□□□□□ -0.65
TGFBR1-208ENST00000550253 GALR2O43603 387 aaPredicted RBP10.96□□□□□ -0.65
TGFBR1-208ENST00000550253 TRAK2O60296 914 aa10.96□□□□□ -0.65
TGFBR1-208ENST00000550253 CLUAP1Q96AJ1 413 aa10.96□□□□□ -0.65
TGFBR1-208ENST00000550253 OCEL1Q9H607 264 aa10.95□□□□□ -0.66
TGFBR1-208ENST00000550253 TMUB1Q9BVT8 246 aa10.94□□□□□ -0.66
TGFBR1-208ENST00000550253 TBC1D12O60347 775 aa10.94□□□□□ -0.66
TGFBR1-208ENST00000550253 EVI5O60447 810 aa10.93□□□□□ -0.66
TGFBR1-208ENST00000550253 SH3D19Q5HYK7 790 aa10.93□□□□□ -0.66
TGFBR1-208ENST00000550253 TMEM92Q6UXU6 159 aa10.93□□□□□ -0.66
TGFBR1-208ENST00000550253 MYO15BQ96JP2 1530 aa10.93□□□□□ -0.66
TGFBR1-208ENST00000550253 ATN1P54259 1190 aaPredicted RBP10.92□□□□□ -0.66
TGFBR1-208ENST00000550253 MCM6Q14566 821 aa10.91□□□□□ -0.66
TGFBR1-208ENST00000550253 G3V3G9 751 aa10.9□□□□□ -0.66
TGFBR1-208ENST00000550253 CCDC82Q8N4S0 544 aa10.9□□□□□ -0.66
TGFBR1-208ENST00000550253 IER5LQ5T953 404 aa10.89□□□□□ -0.67
TGFBR1-208ENST00000550253 RANGAP1P46060 587 aaPredicted RBP10.89□□□□□ -0.67
TGFBR1-208ENST00000550253 NPDC1Q9NQX5 325 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms