RNA–Protein interactions for RNA: ENST00000549561.6

MRPL42-205, Transcript of mitochondrial ribosomal protein L42, humanhuman

TSL 3

Gene MRPL42, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-205ENST00000549561 PLSCR2Q9NRY7 297 aa10.07□□□□□ -0.8
MRPL42-205ENST00000549561 TMEM92Q6UXU6 159 aa10.06□□□□□ -0.8
MRPL42-205ENST00000549561 SLAIN1Q8ND83 568 aa10.04□□□□□ -0.8
MRPL42-205ENST00000549561 FAM163AQ96GL9 167 aaPredicted RBP10.04□□□□□ -0.8
MRPL42-205ENST00000549561 KIF3CO14782 793 aa10.03□□□□□ -0.8
MRPL42-205ENST00000549561 CADPS2Q86UW7 1296 aa10□□□□□ -0.81
MRPL42-205ENST00000549561 CRISPLD2Q9H0B8 497 aa10□□□□□ -0.81
MRPL42-205ENST00000549561 PCDH10Q9P2E7 1040 aa9.99□□□□□ -0.81
MRPL42-205ENST00000549561 C2orf72A6NCS6 295 aa9.98□□□□□ -0.81
MRPL42-205ENST00000549561 GPHNQ9NQX3 736 aaPredicted RBP9.98□□□□□ -0.81
MRPL42-205ENST00000549561 NCKAP5LQ9HCH0 1330 aa9.98□□□□□ -0.81
MRPL42-205ENST00000549561 TMC2Q8TDI7 906 aa9.96□□□□□ -0.82
MRPL42-205ENST00000549561 TSHZ2Q9NRE2 1034 aa9.96□□□□□ -0.82
MRPL42-205ENST00000549561 PDE4AP27815 886 aa9.95□□□□□ -0.82
MRPL42-205ENST00000549561 LCE2DQ5TA82 110 aaPredicted RBP9.94□□□□□ -0.82
MRPL42-205ENST00000549561 FOXK1P85037 733 aa9.93□□□□□ -0.82
MRPL42-205ENST00000549561 MFSD10Q14728 455 aa9.93□□□□□ -0.82
MRPL42-205ENST00000549561 DSG2Q14126 1118 aa9.9□□□□□ -0.82
MRPL42-205ENST00000549561 HOXB3P14651 431 aaPredicted RBP9.89□□□□□ -0.83
MRPL42-205ENST00000549561 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
MRPL42-205ENST00000549561 SNPHO15079 494 aa9.88□□□□□ -0.83
MRPL42-205ENST00000549561 DDX27Q96GQ7 796 aaKnown RBP9.88□□□□□ -0.83
MRPL42-205ENST00000549561 HAP1P54257 671 aaPredicted RBP9.87□□□□□ -0.83
MRPL42-205ENST00000549561 PPP1R15BQ5SWA1 713 aa9.87□□□□□ -0.83
MRPL42-205ENST00000549561 PLPP6Q8IY26 295 aa9.87□□□□□ -0.83
MRPL42-205ENST00000549561 SLC34A2O95436 690 aa9.85□□□□□ -0.83
MRPL42-205ENST00000549561 DOK7Q18PE1 504 aa9.84□□□□□ -0.83
MRPL42-205ENST00000549561 ST18O60284 1047 aa9.82□□□□□ -0.84
MRPL42-205ENST00000549561 CAMK2BQ13554 666 aa9.81□□□□□ -0.84
MRPL42-205ENST00000549561 ZSWIM6Q9HCJ5 1215 aa9.81□□□□□ -0.84
MRPL42-205ENST00000549561 PTCD2Q8WV60 388 aaKnown RBP9.79□□□□□ -0.84
MRPL42-205ENST00000549561 RIMBP2O15034 1052 aa9.78□□□□□ -0.84
MRPL42-205ENST00000549561 KDM2AQ9Y2K7 1162 aa9.78□□□□□ -0.84
MRPL42-205ENST00000549561 GPR153Q6NV75 609 aa9.77□□□□□ -0.85
MRPL42-205ENST00000549561 CDAN1Q8IWY9 1227 aa9.77□□□□□ -0.85
MRPL42-205ENST00000549561 VSIG10Q8N0Z9 540 aa9.77□□□□□ -0.85
MRPL42-205ENST00000549561 ZNF710Q8N1W2 664 aa9.77□□□□□ -0.85
MRPL42-205ENST00000549561 OXER1Q8TDS5 423 aa9.77□□□□□ -0.85
MRPL42-205ENST00000549561 WDR70Q9NW82 654 aa9.77□□□□□ -0.85
MRPL42-205ENST00000549561 EMILIN3Q9NT22 766 aa9.76□□□□□ -0.85
MRPL42-205ENST00000549561 HOXB1P14653 301 aaPredicted RBP9.75□□□□□ -0.85
MRPL42-205ENST00000549561 PCDHGA4Q9Y5G9 962 aa9.75□□□□□ -0.85
MRPL42-205ENST00000549561 E2F4Q16254 413 aa9.74□□□□□ -0.85
MRPL42-205ENST00000549561 KDM4FA0A1W2PPD8 638 aa9.72□□□□□ -0.85
MRPL42-205ENST00000549561 ARSIQ5FYB1 569 aa9.72□□□□□ -0.85
MRPL42-205ENST00000549561 ARIH1Q9Y4X5 557 aaPredicted RBP9.72□□□□□ -0.85
MRPL42-205ENST00000549561 UPF1Q92900 1129 aaKnown RBP eCLIP9.71□□□□□ -0.869e-19■■□□□ 14.5
MRPL42-205ENST00000549561 TBC1D12O60347 775 aa9.7□□□□□ -0.86
MRPL42-205ENST00000549561 KHSRPQ92945 711 aaKnown RBP eCLIP9.7□□□□□ -0.865e-6■■■□□ 15.3
MRPL42-205ENST00000549561 NUDT7P0C024 238 aa9.67□□□□□ -0.86
MRPL42-205ENST00000549561 KCNV2Q8TDN2 545 aa9.67□□□□□ -0.86
MRPL42-205ENST00000549561 DPYSL4O14531 572 aa9.66□□□□□ -0.86
MRPL42-205ENST00000549561 MAP3K9P80192 1104 aa9.66□□□□□ -0.86
MRPL42-205ENST00000549561 MARVELD3Q96A59 401 aa9.66□□□□□ -0.86
MRPL42-205ENST00000549561 P3H3Q8IVL6 736 aa9.65□□□□□ -0.86
MRPL42-205ENST00000549561 ANO8Q9HCE9 1232 aaPredicted RBP9.65□□□□□ -0.86
MRPL42-205ENST00000549561 SLC24A1O60721 1099 aa9.64□□□□□ -0.87
MRPL42-205ENST00000549561 EMP3P54852 163 aa9.64□□□□□ -0.87
MRPL42-205ENST00000549561 ARHGEF1Q92888 912 aaKnown RBP9.64□□□□□ -0.87
MRPL42-205ENST00000549561 EVI5O60447 810 aa9.63□□□□□ -0.87
MRPL42-205ENST00000549561 PDIA6Q15084 440 aa9.62□□□□□ -0.87
MRPL42-205ENST00000549561 ZNF316A6NFI3 1004 aaPredicted RBP9.61□□□□□ -0.87
MRPL42-205ENST00000549561 LHX6Q9UPM6 363 aa9.61□□□□□ -0.87
MRPL42-205ENST00000549561 SPDYE16A6NNV3 312 aaPredicted RBP9.6□□□□□ -0.87
MRPL42-205ENST00000549561 POTEB3A0JP26 581 aa9.59□□□□□ -0.87
MRPL42-205ENST00000549561 POTEBQ6S5H4 581 aa9.59□□□□□ -0.87
MRPL42-205ENST00000549561 ERBB3P21860 1342 aa9.58□□□□□ -0.88
MRPL42-205ENST00000549561 FAM205CA6NFA0 338 aa9.58□□□□□ -0.88
MRPL42-205ENST00000549561 PTGER2P43116 358 aa9.58□□□□□ -0.88
MRPL42-205ENST00000549561 HS3ST6Q96QI5 342 aa9.58□□□□□ -0.88
MRPL42-205ENST00000549561 PSDA5PKW4 1024 aaPredicted RBP9.56□□□□□ -0.88
MRPL42-205ENST00000549561 VARS2Q5ST30 1063 aaKnown RBP9.56□□□□□ -0.88
MRPL42-205ENST00000549561 FOSBP53539 338 aa9.54□□□□□ -0.88
MRPL42-205ENST00000549561 JPH4Q96JJ6 628 aa9.54□□□□□ -0.88
MRPL42-205ENST00000549561 SPNS2Q8IVW8 549 aa9.52□□□□□ -0.89
MRPL42-205ENST00000549561 PHF14O94880 888 aa9.51□□□□□ -0.89
MRPL42-205ENST00000549561 ZNF687Q8N1G0 1237 aa9.51□□□□□ -0.89
MRPL42-205ENST00000549561 MMRN1Q13201 1228 aa9.5□□□□□ -0.89
MRPL42-205ENST00000549561 PPP4R3BQ5MIZ7 849 aa9.5□□□□□ -0.89
MRPL42-205ENST00000549561 ZNF454Q8N9F8 522 aa9.5□□□□□ -0.89
MRPL42-205ENST00000549561 PCDHGA10Q9Y5H3 936 aa9.5□□□□□ -0.89
MRPL42-205ENST00000549561 DDX12PQ92771 950 aa9.48□□□□□ -0.89
MRPL42-205ENST00000549561 EPAS1Q99814 870 aa9.48□□□□□ -0.89
MRPL42-205ENST00000549561 SEMA3EO15041 775 aa9.47□□□□□ -0.89
MRPL42-205ENST00000549561 TYW1BQ6NUM6 668 aa9.47□□□□□ -0.89
MRPL42-205ENST00000549561 ZDHHC16Q969W1 377 aa9.47□□□□□ -0.89
MRPL42-205ENST00000549561 POTEEQ6S8J3 1075 aa9.46□□□□□ -0.9
MRPL42-205ENST00000549561 FBXW7Q969H0 707 aa9.46□□□□□ -0.9
MRPL42-205ENST00000549561 TESPA1A2RU30 521 aaPredicted RBP9.45□□□□□ -0.9
MRPL42-205ENST00000549561 PBX2P40425 430 aa9.45□□□□□ -0.9
MRPL42-205ENST00000549561 MLLT3P42568 568 aaPredicted RBP9.45□□□□□ -0.9
MRPL42-205ENST00000549561 BCL2L12Q9HB09 334 aa9.45□□□□□ -0.9
MRPL42-205ENST00000549561 OSBPP22059 807 aa9.44□□□□□ -0.9
MRPL42-205ENST00000549561 KRTAP3-3Q9BYR6 98 aa9.44□□□□□ -0.9
MRPL42-205ENST00000549561 KRTAP3-2Q9BYR7 98 aa9.44□□□□□ -0.9
MRPL42-205ENST00000549561 ADAM33Q9BZ11 813 aa9.44□□□□□ -0.9
MRPL42-205ENST00000549561 GRXCR2A6NFK2 248 aa9.43□□□□□ -0.9
MRPL42-205ENST00000549561 NBR1Q14596 966 aa9.43□□□□□ -0.9
MRPL42-205ENST00000549561 PRIM1P49642 420 aaKnown RBP9.42□□□□□ -0.9
MRPL42-205ENST00000549561 EN1Q05925 392 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms