RNA–Protein interactions for RNA: ENST00000549395.1

LETMD1-219, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 475 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-219ENST00000549395 LTBP4Q8N2S1 1624 aa13.15□□□□□ -0.3
LETMD1-219ENST00000549395 PTPRTO14522 1441 aa13.14□□□□□ -0.31
LETMD1-219ENST00000549395 MAGI2Q86UL8 1455 aa13.14□□□□□ -0.31
LETMD1-219ENST00000549395 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
LETMD1-219ENST00000549395 UHRF1BP1Q6BDS2 1440 aa13.13□□□□□ -0.31
LETMD1-219ENST00000549395 IQSEC2Q5JU85 1478 aa13.12□□□□□ -0.31
LETMD1-219ENST00000549395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.11□□□□□ -0.31
LETMD1-219ENST00000549395 NUP153P49790 1475 aaKnown RBP13.1□□□□□ -0.31
LETMD1-219ENST00000549395 ATP10AO60312 1499 aa13.09□□□□□ -0.31
LETMD1-219ENST00000549395 SAMD9Q5K651 1589 aa13.08□□□□□ -0.32
LETMD1-219ENST00000549395 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
LETMD1-219ENST00000549395 PRXQ9BXM0 1461 aa13.08□□□□□ -0.32
LETMD1-219ENST00000549395 C9orf84Q5VXU9 1444 aa13.07□□□□□ -0.32
LETMD1-219ENST00000549395 SCAPERQ9BY12 1400 aa13.06□□□□□ -0.32
LETMD1-219ENST00000549395 C3P01024 1663 aa13.06□□□□□ -0.32
LETMD1-219ENST00000549395 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
LETMD1-219ENST00000549395 NCOA1Q15788 1441 aa13.02□□□□□ -0.33
LETMD1-219ENST00000549395 MED1Q15648 1581 aaPredicted RBP13.02□□□□□ -0.33
LETMD1-219ENST00000549395 ZNF335Q9H4Z2 1342 aaPredicted RBP13□□□□□ -0.33
LETMD1-219ENST00000549395 PLCH2O75038 1416 aa12.99□□□□□ -0.33
LETMD1-219ENST00000549395 CAMSAP1Q5T5Y3 1602 aa12.99□□□□□ -0.33
LETMD1-219ENST00000549395 TRAPPC8Q9Y2L5 1435 aa12.98□□□□□ -0.33
LETMD1-219ENST00000549395 RANGAP1P46060 587 aaPredicted RBP12.98□□□□□ -0.33
LETMD1-219ENST00000549395 DIP2CQ9Y2E4 1556 aa12.96□□□□□ -0.33
LETMD1-219ENST00000549395 HSPA1LP34931 641 aa12.96□□□□□ -0.33
LETMD1-219ENST00000549395 ESF1Q9H501 851 aaKnown RBP12.96□□□□□ -0.33
LETMD1-219ENST00000549395 MYT1LQ9UL68 1186 aa12.96□□□□□ -0.33
LETMD1-219ENST00000549395 MYO5CQ9NQX4 1742 aa12.96□□□□□ -0.34
LETMD1-219ENST00000549395 NCKAP5LQ9HCH0 1330 aa12.95□□□□□ -0.34
LETMD1-219ENST00000549395 AFAP1Q8N556 730 aa12.95□□□□□ -0.34
LETMD1-219ENST00000549395 SCAF1Q9H7N4 1312 aaKnown RBP12.94□□□□□ -0.34
LETMD1-219ENST00000549395 CDK13Q14004 1512 aaKnown RBP12.94□□□□□ -0.34
LETMD1-219ENST00000549395 ZNF518AQ6AHZ1 1483 aa12.94□□□□□ -0.34
LETMD1-219ENST00000549395 EFCAB2Q5VUJ9 269 aa12.94□□□□□ -0.34
LETMD1-219ENST00000549395 KDM5CP41229 1560 aa12.94□□□□□ -0.34
LETMD1-219ENST00000549395 ABCA6Q8N139 1617 aa12.93□□□□□ -0.34
LETMD1-219ENST00000549395 REREQ9P2R6 1566 aa12.93□□□□□ -0.34
LETMD1-219ENST00000549395 PIP4K2BP78356 416 aa12.92□□□□□ -0.34
LETMD1-219ENST00000549395 PHF23Q9BUL5 403 aaPredicted RBP12.92□□□□□ -0.34
LETMD1-219ENST00000549395 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
LETMD1-219ENST00000549395 AGLP35573 1532 aa12.9□□□□□ -0.34
LETMD1-219ENST00000549395 ARHGAP5Q13017 1502 aa12.88□□□□□ -0.35
LETMD1-219ENST00000549395 CNTLNQ9NXG0 1405 aa12.88□□□□□ -0.35
LETMD1-219ENST00000549395 KIF14Q15058 1648 aa12.87□□□□□ -0.35
LETMD1-219ENST00000549395 NPATQ14207 1427 aa12.87□□□□□ -0.35
LETMD1-219ENST00000549395 MROH2AA6NES4 1674 aa12.86□□□□□ -0.35
LETMD1-219ENST00000549395 MLH3Q9UHC1 1453 aa12.86□□□□□ -0.35
LETMD1-219ENST00000549395 PKD2Q13563 968 aa12.86□□□□□ -0.35
LETMD1-219ENST00000549395 ZNF142P52746 1687 aaPredicted RBP12.86□□□□□ -0.35
LETMD1-219ENST00000549395 PLA2R1Q13018 1463 aa12.85□□□□□ -0.35
LETMD1-219ENST00000549395 MYO3AQ8NEV4 1616 aa12.85□□□□□ -0.35
LETMD1-219ENST00000549395 TOM1O60784 492 aa12.85□□□□□ -0.35
LETMD1-219ENST00000549395 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
LETMD1-219ENST00000549395 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
LETMD1-219ENST00000549395 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
LETMD1-219ENST00000549395 ZMYM3Q14202 1370 aa12.83□□□□□ -0.36
LETMD1-219ENST00000549395 CDC42BPBQ9Y5S2 1711 aa12.83□□□□□ -0.36
LETMD1-219ENST00000549395 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-219ENST00000549395 KIDINS220Q9ULH0 1771 aa12.83□□□□□ -0.36
LETMD1-219ENST00000549395 CEP170BQ9Y4F5 1589 aaPredicted RBP12.82□□□□□ -0.36
LETMD1-219ENST00000549395 CLTCQ00610 1675 aaKnown RBP12.81□□□□□ -0.36
LETMD1-219ENST00000549395 ITSN2Q9NZM3 1697 aa12.8□□□□□ -0.36
LETMD1-219ENST00000549395 SENP3Q9H4L4 574 aaPredicted RBP12.8□□□□□ -0.36
LETMD1-219ENST00000549395 CPS1P31327 1500 aa12.79□□□□□ -0.36
LETMD1-219ENST00000549395 ABCC1P33527 1531 aa12.78□□□□□ -0.36
LETMD1-219ENST00000549395 CDK11AQ9UQ88 783 aaPredicted RBP12.78□□□□□ -0.36
LETMD1-219ENST00000549395 ALKQ9UM73 1620 aa12.77□□□□□ -0.36
LETMD1-219ENST00000549395 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.36
LETMD1-219ENST00000549395 TROQ12816 1431 aaPredicted RBP12.77□□□□□ -0.37
LETMD1-219ENST00000549395 PTPRKQ15262 1439 aa12.77□□□□□ -0.37
LETMD1-219ENST00000549395 SHANK2Q9UPX8 1470 aa12.77□□□□□ -0.37
LETMD1-219ENST00000549395 RGS17Q9UGC6 210 aaPredicted RBP12.76□□□□□ -0.37
LETMD1-219ENST00000549395 DNMT1P26358 1616 aaKnown RBP12.75□□□□□ -0.37
LETMD1-219ENST00000549395 PREX2Q70Z35 1606 aa12.75□□□□□ -0.37
LETMD1-219ENST00000549395 CLIP1P30622 1438 aa12.74□□□□□ -0.37
LETMD1-219ENST00000549395 LRRIQ1Q96JM4 1722 aa12.74□□□□□ -0.37
LETMD1-219ENST00000549395 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
LETMD1-219ENST00000549395 A2ML1A8K2U0 1454 aa12.72□□□□□ -0.37
LETMD1-219ENST00000549395 SAMD9LQ8IVG5 1584 aa12.72□□□□□ -0.37
LETMD1-219ENST00000549395 VWDEQ8N2E2 1590 aa12.71□□□□□ -0.37
LETMD1-219ENST00000549395 FMN1Q68DA7 1419 aa12.71□□□□□ -0.38
LETMD1-219ENST00000549395 GGT6Q6P531 493 aa12.7□□□□□ -0.38
LETMD1-219ENST00000549395 CDC42BPAQ5VT25 1732 aa12.7□□□□□ -0.38
LETMD1-219ENST00000549395 PLXNC1O60486 1568 aa12.68□□□□□ -0.38
LETMD1-219ENST00000549395 SPAG9O60271 1321 aaKnown RBP12.67□□□□□ -0.38
LETMD1-219ENST00000549395 STRCP1A6NGW2 1772 aa12.66□□□□□ -0.38
LETMD1-219ENST00000549395 A2MP01023 1474 aa12.66□□□□□ -0.38
LETMD1-219ENST00000549395 POTEAQ6S8J7 498 aa12.66□□□□□ -0.38
LETMD1-219ENST00000549395 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
LETMD1-219ENST00000549395 ATP7AQ04656 1500 aa12.66□□□□□ -0.38
LETMD1-219ENST00000549395 SYCP2Q9BX26 1530 aa12.66□□□□□ -0.38
LETMD1-219ENST00000549395 HNRNPMP52272 730 aaKnown RBP eCLIP12.65□□□□□ -0.38
LETMD1-219ENST00000549395 RNF17Q9BXT8 1623 aaKnown RBP12.65□□□□□ -0.38
LETMD1-219ENST00000549395 SETD1AO15047 1707 aaKnown RBP12.65□□□□□ -0.38
LETMD1-219ENST00000549395 ANKLE2Q86XL3 938 aa12.64□□□□□ -0.39
LETMD1-219ENST00000549395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
LETMD1-219ENST00000549395 ARHGAP35Q9NRY4 1499 aa12.64□□□□□ -0.39
LETMD1-219ENST00000549395 INO80Q9ULG1 1556 aaPredicted RBP12.64□□□□□ -0.39
LETMD1-219ENST00000549395 EEA1Q15075 1411 aa12.63□□□□□ -0.39
LETMD1-219ENST00000549395 LRRC7Q96NW7 1537 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms