RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
USP15-213ENST00000549268 C2orf72A6NCS6 295 aa13.11□□□□□ -0.31
USP15-213ENST00000549268 GPHNQ9NQX3 736 aaPredicted RBP13.1□□□□□ -0.31
USP15-213ENST00000549268 CFAP44Q96MT7 982 aa13.08□□□□□ -0.32
USP15-213ENST00000549268 SLC24A1O60721 1099 aa13.07□□□□□ -0.32
USP15-213ENST00000549268 CRISPLD2Q9H0B8 497 aa13.07□□□□□ -0.32
USP15-213ENST00000549268 HOXB3P14651 431 aaPredicted RBP13.06□□□□□ -0.32
USP15-213ENST00000549268 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
USP15-213ENST00000549268 FAM163AQ96GL9 167 aaPredicted RBP13.05□□□□□ -0.32
USP15-213ENST00000549268 PDE4AP27815 886 aa13.04□□□□□ -0.32
USP15-213ENST00000549268 FOXK1P85037 733 aa13.04□□□□□ -0.32
USP15-213ENST00000549268 LCE2DQ5TA82 110 aaPredicted RBP13.03□□□□□ -0.32
USP15-213ENST00000549268 NCKAP5LQ9HCH0 1330 aa13.02□□□□□ -0.33
USP15-213ENST00000549268 ST18O60284 1047 aa13.01□□□□□ -0.33
USP15-213ENST00000549268 ZSWIM6Q9HCJ5 1215 aa13□□□□□ -0.33
USP15-213ENST00000549268 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
USP15-213ENST00000549268 RIMBP2O15034 1052 aa12.99□□□□□ -0.33
USP15-213ENST00000549268 SLC34A2O95436 690 aa12.99□□□□□ -0.33
USP15-213ENST00000549268 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
USP15-213ENST00000549268 DSG2Q14126 1118 aa12.97□□□□□ -0.33
USP15-213ENST00000549268 MFSD10Q14728 455 aa12.96□□□□□ -0.33
USP15-213ENST00000549268 ZNF710Q8N1W2 664 aa12.96□□□□□ -0.33
USP15-213ENST00000549268 PLCB2Q00722 1185 aa12.95□□□□□ -0.34
USP15-213ENST00000549268 PLPP6Q8IY26 295 aa12.95□□□□□ -0.34
USP15-213ENST00000549268 LARP6Q9BRS8 491 aaKnown RBP12.94□□□□□ -0.34
USP15-213ENST00000549268 HOXB1P14653 301 aaPredicted RBP12.92□□□□□ -0.34
USP15-213ENST00000549268 PPP1R15BQ5SWA1 713 aa12.92□□□□□ -0.34
USP15-213ENST00000549268 DDX27Q96GQ7 796 aaKnown RBP12.92□□□□□ -0.34
USP15-213ENST00000549268 GPR153Q6NV75 609 aa12.9□□□□□ -0.34
USP15-213ENST00000549268 PTCD2Q8WV60 388 aaKnown RBP12.88□□□□□ -0.35
USP15-213ENST00000549268 POTEMA6NI47 508 aa12.86□□□□□ -0.35
USP15-213ENST00000549268 POTEGQ6S5H5 508 aa12.86□□□□□ -0.35
USP15-213ENST00000549268 TSHZ2Q9NRE2 1034 aa12.85□□□□□ -0.35
USP15-213ENST00000549268 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
USP15-213ENST00000549268 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
USP15-213ENST00000549268 ARSIQ5FYB1 569 aa12.83□□□□□ -0.36
USP15-213ENST00000549268 OXER1Q8TDS5 423 aa12.82□□□□□ -0.36
USP15-213ENST00000549268 TBC1D12O60347 775 aa12.81□□□□□ -0.36
USP15-213ENST00000549268 EMP3P54852 163 aa12.81□□□□□ -0.36
USP15-213ENST00000549268 CAMK2BQ13554 666 aa12.81□□□□□ -0.36
USP15-213ENST00000549268 MARVELD3Q96A59 401 aa12.81□□□□□ -0.36
USP15-213ENST00000549268 KDM4FA0A1W2PPD8 638 aa12.77□□□□□ -0.37
USP15-213ENST00000549268 WDR70Q9NW82 654 aa12.76□□□□□ -0.37
USP15-213ENST00000549268 PCDH10Q9P2E7 1040 aa12.76□□□□□ -0.37
USP15-213ENST00000549268 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.377e-7■□□□□ 10.6
USP15-213ENST00000549268 EMILIN3Q9NT22 766 aa12.74□□□□□ -0.37
USP15-213ENST00000549268 NUDT7P0C024 238 aa12.73□□□□□ -0.37
USP15-213ENST00000549268 ERBB3P21860 1342 aa12.72□□□□□ -0.37
USP15-213ENST00000549268 UPF1Q92900 1129 aaKnown RBP eCLIP12.72□□□□□ -0.37
USP15-213ENST00000549268 FAM205CA6NFA0 338 aa12.71□□□□□ -0.37
USP15-213ENST00000549268 ZNF316A6NFI3 1004 aaPredicted RBP12.71□□□□□ -0.37
USP15-213ENST00000549268 E2F4Q16254 413 aa12.71□□□□□ -0.37
USP15-213ENST00000549268 HS3ST6Q96QI5 342 aa12.7□□□□□ -0.38
USP15-213ENST00000549268 ARIH1Q9Y4X5 557 aaPredicted RBP12.69□□□□□ -0.38
USP15-213ENST00000549268 POTEB3A0JP26 581 aa12.68□□□□□ -0.38
USP15-213ENST00000549268 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
USP15-213ENST00000549268 POTEBQ6S5H4 581 aa12.68□□□□□ -0.38
USP15-213ENST00000549268 ANO8Q9HCE9 1232 aaPredicted RBP12.68□□□□□ -0.38
USP15-213ENST00000549268 PSDA5PKW4 1024 aaPredicted RBP12.67□□□□□ -0.38
USP15-213ENST00000549268 LHX6Q9UPM6 363 aa12.67□□□□□ -0.38
USP15-213ENST00000549268 VARS2Q5ST30 1063 aaKnown RBP12.66□□□□□ -0.38
USP15-213ENST00000549268 EVI5O60447 810 aa12.64□□□□□ -0.39
USP15-213ENST00000549268 CDAN1Q8IWY9 1227 aa12.64□□□□□ -0.39
USP15-213ENST00000549268 ZNF687Q8N1G0 1237 aa12.62□□□□□ -0.39
USP15-213ENST00000549268 DPYSL4O14531 572 aa12.6□□□□□ -0.39
USP15-213ENST00000549268 VSIG10Q8N0Z9 540 aa12.58□□□□□ -0.4
USP15-213ENST00000549268 SPDYE16A6NNV3 312 aaPredicted RBP12.57□□□□□ -0.4
USP15-213ENST00000549268 PDIA6Q15084 440 aa12.56□□□□□ -0.4
USP15-213ENST00000549268 PTGER2P43116 358 aa12.55□□□□□ -0.4
USP15-213ENST00000549268 PPP4R3BQ5MIZ7 849 aa12.55□□□□□ -0.4
USP15-213ENST00000549268 P3H3Q8IVL6 736 aa12.55□□□□□ -0.4
USP15-213ENST00000549268 ARHGEF1Q92888 912 aaKnown RBP12.55□□□□□ -0.4
USP15-213ENST00000549268 FOSBP53539 338 aa12.54□□□□□ -0.4
USP15-213ENST00000549268 JPH4Q96JJ6 628 aa12.54□□□□□ -0.4
USP15-213ENST00000549268 KDM2AQ9Y2K7 1162 aa12.54□□□□□ -0.4
USP15-213ENST00000549268 PBX2P40425 430 aa12.53□□□□□ -0.4
USP15-213ENST00000549268 KCNV2Q8TDN2 545 aa12.52□□□□□ -0.41
USP15-213ENST00000549268 KRTAP3-3Q9BYR6 98 aa12.52□□□□□ -0.41
USP15-213ENST00000549268 KRTAP3-2Q9BYR7 98 aa12.52□□□□□ -0.41
USP15-213ENST00000549268 ZNF454Q8N9F8 522 aa12.5□□□□□ -0.41
USP15-213ENST00000549268 PHF14O94880 888 aa12.49□□□□□ -0.41
USP15-213ENST00000549268 FBXW7Q969H0 707 aa12.46□□□□□ -0.41
USP15-213ENST00000549268 ZDHHC16Q969W1 377 aa12.46□□□□□ -0.41
USP15-213ENST00000549268 EPAS1Q99814 870 aa12.46□□□□□ -0.41
USP15-213ENST00000549268 BCL2L12Q9HB09 334 aa12.46□□□□□ -0.41
USP15-213ENST00000549268 PCDHGA10Q9Y5H3 936 aa12.46□□□□□ -0.41
USP15-213ENST00000549268 ARHGAP33O14559 1287 aa12.45□□□□□ -0.42
USP15-213ENST00000549268 POTEEQ6S8J3 1075 aa12.45□□□□□ -0.42
USP15-213ENST00000549268 TYW1BQ6NUM6 668 aa12.43□□□□□ -0.42
USP15-213ENST00000549268 LSM11P83369 360 aaKnown RBP eCLIP12.4□□□□□ -0.42
USP15-213ENST00000549268 DDX12PQ92771 950 aa12.4□□□□□ -0.42
USP15-213ENST00000549268 KCNH8Q96L42 1107 aa12.4□□□□□ -0.42
USP15-213ENST00000549268 ADAM33Q9BZ11 813 aa12.4□□□□□ -0.42
USP15-213ENST00000549268 PTPREP23469 700 aa12.38□□□□□ -0.43
USP15-213ENST00000549268 AXIN2Q9Y2T1 843 aa12.38□□□□□ -0.43
USP15-213ENST00000549268 TK2O00142 265 aa12.35□□□□□ -0.43
USP15-213ENST00000549268 PSEN2P49810 448 aa12.35□□□□□ -0.43
USP15-213ENST00000549268 KCNK17Q96T54 332 aa12.35□□□□□ -0.43
USP15-213ENST00000549268 NBR1Q14596 966 aa12.34□□□□□ -0.43
USP15-213ENST00000549268 SPNS2Q8IVW8 549 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms