RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 LRRC9Q6ZRR7 1453 aa12.61□□□□□ -0.39
DEPDC4-207ENST00000549249 ATP1B4Q9UN42 357 aaPredicted RBP12.61□□□□□ -0.39
DEPDC4-207ENST00000549249 MAGI3Q5TCQ9 1506 aa12.61□□□□□ -0.39
DEPDC4-207ENST00000549249 ABCC2Q92887 1545 aa12.58□□□□□ -0.4
DEPDC4-207ENST00000549249 UACAQ9BZF9 1416 aa12.58□□□□□ -0.4
DEPDC4-207ENST00000549249 EHBP1L1Q8N3D4 1523 aa12.57□□□□□ -0.4
DEPDC4-207ENST00000549249 ADCY10Q96PN6 1610 aa12.56□□□□□ -0.4
DEPDC4-207ENST00000549249 UHRF1BP1LA0JNW5 1464 aa12.55□□□□□ -0.4
DEPDC4-207ENST00000549249 ATP10BO94823 1461 aa12.55□□□□□ -0.4
DEPDC4-207ENST00000549249 ARID3CA6NKF2 412 aa12.55□□□□□ -0.4
DEPDC4-207ENST00000549249 PIP4P2Q8N4L2 257 aa12.54□□□□□ -0.4
DEPDC4-207ENST00000549249 ZCCHC11Q5TAX3 1644 aaKnown RBP12.53□□□□□ -0.4
DEPDC4-207ENST00000549249 SUPT6HQ7KZ85 1726 aaKnown RBP12.53□□□□□ -0.4
DEPDC4-207ENST00000549249 MTUS2Q5JR59 1369 aa12.52□□□□□ -0.41
DEPDC4-207ENST00000549249 TRIM26Q12899 539 aaPredicted RBP12.51□□□□□ -0.41
DEPDC4-207ENST00000549249 SP7Q8TDD2 431 aaPredicted RBP12.51□□□□□ -0.41
DEPDC4-207ENST00000549249 KDM5BQ9UGL1 1544 aa12.51□□□□□ -0.41
DEPDC4-207ENST00000549249 NCOA2Q15596 1464 aa12.49□□□□□ -0.41
DEPDC4-207ENST00000549249 TROQ12816 1431 aaPredicted RBP12.49□□□□□ -0.41
DEPDC4-207ENST00000549249 PHLDB1Q86UU1 1377 aa12.49□□□□□ -0.41
DEPDC4-207ENST00000549249 PITPNM1O00562 1244 aa12.49□□□□□ -0.41
DEPDC4-207ENST00000549249 KIF14Q15058 1648 aa12.48□□□□□ -0.41
DEPDC4-207ENST00000549249 RRBP1Q9P2E9 1410 aaKnown RBP12.46□□□□□ -0.41
DEPDC4-207ENST00000549249 PCGF6Q9BYE7 350 aa12.45□□□□□ -0.42
DEPDC4-207ENST00000549249 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
DEPDC4-207ENST00000549249 NPM1P06748 294 aaKnown RBP eCLIP12.43□□□□□ -0.42
DEPDC4-207ENST00000549249 CDK11AQ9UQ88 783 aaPredicted RBP12.43□□□□□ -0.42
DEPDC4-207ENST00000549249 ABCC10Q5T3U5 1492 aa12.42□□□□□ -0.42
DEPDC4-207ENST00000549249 MYOM3Q5VTT5 1437 aa12.42□□□□□ -0.42
DEPDC4-207ENST00000549249 CDC42BPAQ5VT25 1732 aa12.42□□□□□ -0.42
DEPDC4-207ENST00000549249 PLEKHD1A6NEE1 506 aa12.41□□□□□ -0.42
DEPDC4-207ENST00000549249 SPDYE2BA6NHP3 402 aa12.41□□□□□ -0.42
DEPDC4-207ENST00000549249 SPDYE6P0CI01 402 aa12.41□□□□□ -0.42
DEPDC4-207ENST00000549249 SPDYE2Q495Y8 402 aa12.41□□□□□ -0.42
DEPDC4-207ENST00000549249 FGD6Q6ZV73 1430 aa12.4□□□□□ -0.42
DEPDC4-207ENST00000549249 ITSN2Q9NZM3 1697 aa12.4□□□□□ -0.42
DEPDC4-207ENST00000549249 CCNB3Q8WWL7 1395 aa12.4□□□□□ -0.42
DEPDC4-207ENST00000549249 TTC37Q6PGP7 1564 aa12.39□□□□□ -0.43
DEPDC4-207ENST00000549249 HAX1O00165 279 aa12.39□□□□□ -0.43
DEPDC4-207ENST00000549249 PTPN23Q9H3S7 1636 aa12.39□□□□□ -0.43
DEPDC4-207ENST00000549249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.38□□□□□ -0.43
DEPDC4-207ENST00000549249 WDR7Q9Y4E6 1490 aa12.38□□□□□ -0.43
DEPDC4-207ENST00000549249 ASXL2Q76L83 1435 aa12.37□□□□□ -0.43
DEPDC4-207ENST00000549249 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
DEPDC4-207ENST00000549249 TCOF1Q13428 1488 aaKnown RBP12.37□□□□□ -0.43
DEPDC4-207ENST00000549249 CDC42BPBQ9Y5S2 1711 aa12.37□□□□□ -0.43
DEPDC4-207ENST00000549249 PREX2Q70Z35 1606 aa12.37□□□□□ -0.43
DEPDC4-207ENST00000549249 GPATCH8Q9UKJ3 1502 aaKnown RBP12.37□□□□□ -0.43
DEPDC4-207ENST00000549249 MYO5CQ9NQX4 1742 aa12.36□□□□□ -0.43
DEPDC4-207ENST00000549249 MIA2Q96PC5 1412 aa12.35□□□□□ -0.43
DEPDC4-207ENST00000549249 MAPKBP1O60336 1514 aa12.34□□□□□ -0.43
DEPDC4-207ENST00000549249 ABCA9Q8IUA7 1624 aa12.33□□□□□ -0.43
DEPDC4-207ENST00000549249 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.33□□□□□ -0.44
DEPDC4-207ENST00000549249 FAM69CQ0P6D2 419 aa12.32□□□□□ -0.44
DEPDC4-207ENST00000549249 CAMSAP2Q08AD1 1489 aa12.31□□□□□ -0.44
DEPDC4-207ENST00000549249 FAM50AQ14320 339 aaKnown RBP12.3□□□□□ -0.44
DEPDC4-207ENST00000549249 KCNH8Q96L42 1107 aa12.3□□□□□ -0.44
DEPDC4-207ENST00000549249 SAMD9LQ8IVG5 1584 aa12.3□□□□□ -0.44
DEPDC4-207ENST00000549249 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
DEPDC4-207ENST00000549249 ZNF644Q9H582 1327 aaPredicted RBP12.28□□□□□ -0.44
DEPDC4-207ENST00000549249 CROCC2H7BZ55 1655 aa12.28□□□□□ -0.44
DEPDC4-207ENST00000549249 PTPRKQ15262 1439 aa12.28□□□□□ -0.44
DEPDC4-207ENST00000549249 CFDP1Q9UEE9 299 aaPredicted RBP12.27□□□□□ -0.45
DEPDC4-207ENST00000549249 PLCH2O75038 1416 aa12.27□□□□□ -0.45
DEPDC4-207ENST00000549249 ARHGAP5Q13017 1502 aa12.27□□□□□ -0.45
DEPDC4-207ENST00000549249 ARAP3Q8WWN8 1544 aa12.27□□□□□ -0.45
DEPDC4-207ENST00000549249 DIP2BQ9P265 1576 aa12.26□□□□□ -0.45
DEPDC4-207ENST00000549249 GLI2P10070 1586 aa12.24□□□□□ -0.45
DEPDC4-207ENST00000549249 ITGAEP38570 1179 aa12.24□□□□□ -0.45
DEPDC4-207ENST00000549249 DAPK1P53355 1430 aa12.24□□□□□ -0.45
DEPDC4-207ENST00000549249 SPDYE1Q8NFV5 336 aaPredicted RBP12.24□□□□□ -0.45
DEPDC4-207ENST00000549249 MAP3K4Q9Y6R4 1608 aa12.24□□□□□ -0.45
DEPDC4-207ENST00000549249 KIF13AQ9H1H9 1805 aa12.23□□□□□ -0.45
DEPDC4-207ENST00000549249 ARHGEF5Q12774 1597 aa12.23□□□□□ -0.45
DEPDC4-207ENST00000549249 SYCP2Q9BX26 1530 aa12.23□□□□□ -0.45
DEPDC4-207ENST00000549249 ABCC5O15440 1437 aa12.23□□□□□ -0.45
DEPDC4-207ENST00000549249 ZNF692Q9BU19 519 aaPredicted RBP12.23□□□□□ -0.45
DEPDC4-207ENST00000549249 CLEC11AQ9Y240 323 aa12.23□□□□□ -0.45
DEPDC4-207ENST00000549249 ABCC1P33527 1531 aa12.22□□□□□ -0.45
DEPDC4-207ENST00000549249 MBD5Q9P267 1494 aa12.22□□□□□ -0.45
DEPDC4-207ENST00000549249 ZNF777Q9ULD5 760 aaPredicted RBP12.22□□□□□ -0.45
DEPDC4-207ENST00000549249 ADGBQ8N7X0 1667 aa12.22□□□□□ -0.45
DEPDC4-207ENST00000549249 GCC2Q8IWJ2 1684 aa12.21□□□□□ -0.45
DEPDC4-207ENST00000549249 ARHGEF12Q9NZN5 1544 aa12.21□□□□□ -0.46
DEPDC4-207ENST00000549249 PPRC1Q5VV67 1664 aaKnown RBP12.2□□□□□ -0.46
DEPDC4-207ENST00000549249 SSUH2Q9Y2M2 353 aa12.2□□□□□ -0.46
DEPDC4-207ENST00000549249 FANCAO15360 1455 aa12.2□□□□□ -0.46
DEPDC4-207ENST00000549249 CD109Q6YHK3 1445 aa12.2□□□□□ -0.46
DEPDC4-207ENST00000549249 PRKAR2AP13861 404 aaKnown RBP12.19□□□□□ -0.46
DEPDC4-207ENST00000549249 PLEKHH2Q8IVE3 1493 aa12.19□□□□□ -0.46
DEPDC4-207ENST00000549249 CFAP74Q9C0B2 1584 aa12.18□□□□□ -0.46
DEPDC4-207ENST00000549249 EVX2Q03828 476 aa12.18□□□□□ -0.46
DEPDC4-207ENST00000549249 SHANK2Q9UPX8 1470 aa12.18□□□□□ -0.46
DEPDC4-207ENST00000549249 AKNAQ7Z591 1439 aa12.18□□□□□ -0.46
DEPDC4-207ENST00000549249 KIAA1107Q9UPP5 1409 aa12.18□□□□□ -0.46
DEPDC4-207ENST00000549249 TSPOAP1O95153 1857 aa12.17□□□□□ -0.46
DEPDC4-207ENST00000549249 ADGRL2O95490 1459 aa12.17□□□□□ -0.46
DEPDC4-207ENST00000549249 CCDC141Q6ZP82 1450 aa12.17□□□□□ -0.46
DEPDC4-207ENST00000549249 HNRNPMP52272 730 aaKnown RBP eCLIP12.17□□□□□ -0.46
DEPDC4-207ENST00000549249 EFCAB2Q5VUJ9 269 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms