RNA–Protein interactions for RNA: ENST00000548883.5

C12orf42-208, Transcript of chromosome 12 open reading frame 42, human

APPRIS P2 TSL 1 (best) BASIC

Gene C12orf42, Length 1,336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C12orf42-208	ENST00000548883	HECW2	Q9P2P5	1572 aa		33.18	■■■□□ 2.9
C12orf42-208	ENST00000548883	POGZ	Q7Z3K3	1410 aa		33.16	■■■□□ 2.9
C12orf42-208	ENST00000548883	SCAPER	Q9BY12	1400 aa		33.16	■■■□□ 2.9
C12orf42-208	ENST00000548883	MAGI2	Q86UL8	1455 aa		33.16	■■■□□ 2.9
C12orf42-208	ENST00000548883	EFCAB2	Q5VUJ9	269 aa		33.14	■■■□□ 2.9
C12orf42-208	ENST00000548883	ARHGAP5	Q13017	1502 aa		33.14	■■■□□ 2.9
C12orf42-208	ENST00000548883	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.13	■■■□□ 2.89
C12orf42-208	ENST00000548883	MADD	Q8WXG6	1647 aa		33.11	■■■□□ 2.89
C12orf42-208	ENST00000548883	PTPRM	P28827	1452 aa		33.09	■■■□□ 2.89
C12orf42-208	ENST00000548883	PREX2	Q70Z35	1606 aa		33.08	■■■□□ 2.89
C12orf42-208	ENST00000548883	YEATS2	Q9ULM3	1422 aa		33.08	■■■□□ 2.89
C12orf42-208	ENST00000548883	CDC42BPB	Q9Y5S2	1711 aa		33.07	■■■□□ 2.88
C12orf42-208	ENST00000548883	ZNF518A	Q6AHZ1	1483 aa		33.03	■■■□□ 2.88
C12orf42-208	ENST00000548883	SIGLEC1	Q9BZZ2	1709 aa		33.02	■■■□□ 2.88
C12orf42-208	ENST00000548883	RIMS1	Q86UR5	1692 aa	Known RBP	33.01	■■■□□ 2.87
C12orf42-208	ENST00000548883	KDM5C	P41229	1560 aa		33	■■■□□ 2.87
C12orf42-208	ENST00000548883	CDC42BPA	Q5VT25	1732 aa		32.98	■■■□□ 2.87
C12orf42-208	ENST00000548883	ABCC1	P33527	1531 aa		32.94	■■■□□ 2.86
C12orf42-208	ENST00000548883	C9orf84	Q5VXU9	1444 aa		32.94	■■■□□ 2.86
C12orf42-208	ENST00000548883	ATP10A	O60312	1499 aa		32.94	■■■□□ 2.86
C12orf42-208	ENST00000548883	ITSN2	Q9NZM3	1697 aa		32.92	■■■□□ 2.86
C12orf42-208	ENST00000548883	FER1L4	A9Z1Z3	1794 aa		32.9	■■■□□ 2.86
C12orf42-208	ENST00000548883	CEP162	Q5TB80	1403 aa		32.87	■■■□□ 2.85
C12orf42-208	ENST00000548883	AFAP1	Q8N556	730 aa		32.85	■■■□□ 2.85
C12orf42-208	ENST00000548883	DIP2C	Q9Y2E4	1556 aa		32.85	■■■□□ 2.85
C12orf42-208	ENST00000548883	ARHGEF12	Q9NZN5	1544 aa		32.83	■■■□□ 2.85
C12orf42-208	ENST00000548883	MLH3	Q9UHC1	1453 aa		32.83	■■■□□ 2.85
C12orf42-208	ENST00000548883	RERE	Q9P2R6	1566 aa		32.82	■■■□□ 2.84
C12orf42-208	ENST00000548883	ABCA6	Q8N139	1617 aa		32.81	■■■□□ 2.84
C12orf42-208	ENST00000548883	MYT1L	Q9UL68	1186 aa		32.8	■■■□□ 2.84
C12orf42-208	ENST00000548883	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.8	■■■□□ 2.84
C12orf42-208	ENST00000548883	SAMD9L	Q8IVG5	1584 aa		32.79	■■■□□ 2.84
C12orf42-208	ENST00000548883	TRAPPC8	Q9Y2L5	1435 aa		32.79	■■■□□ 2.84
C12orf42-208	ENST00000548883	MLEC	Q14165	292 aa		32.79	■■■□□ 2.84
C12orf42-208	ENST00000548883	MTUS2	Q5JR59	1369 aa		32.79	■■■□□ 2.84
C12orf42-208	ENST00000548883	EHBP1L1	Q8N3D4	1523 aa		32.77	■■■□□ 2.84
C12orf42-208	ENST00000548883	LMTK3	Q96Q04	1460 aa		32.75	■■■□□ 2.83
C12orf42-208	ENST00000548883	SYCP2	Q9BX26	1530 aa		32.74	■■■□□ 2.83
C12orf42-208	ENST00000548883	KIDINS220	Q9ULH0	1771 aa		32.74	■■■□□ 2.83
C12orf42-208	ENST00000548883	CCNB3	Q8WWL7	1395 aa		32.72	■■■□□ 2.83
C12orf42-208	ENST00000548883	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.71	■■■□□ 2.83
C12orf42-208	ENST00000548883	PLEKHH2	Q8IVE3	1493 aa		32.7	■■■□□ 2.82
C12orf42-208	ENST00000548883	AGL	P35573	1532 aa		32.67	■■■□□ 2.82
C12orf42-208	ENST00000548883	TIAM1	Q13009	1591 aa		32.67	■■■□□ 2.82
C12orf42-208	ENST00000548883	PLPPR3	Q6T4P5	718 aa		32.67	■■■□□ 2.82
C12orf42-208	ENST00000548883	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.66	■■■□□ 2.82
C12orf42-208	ENST00000548883	KIAA1107	Q9UPP5	1409 aa		32.65	■■■□□ 2.82
C12orf42-208	ENST00000548883	INO80	Q9ULG1	1556 aa	Predicted RBP	32.59	■■■□□ 2.81
C12orf42-208	ENST00000548883	ATP7A	Q04656	1500 aa		32.59	■■■□□ 2.81
C12orf42-208	ENST00000548883	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.59	■■■□□ 2.81
C12orf42-208	ENST00000548883	PREX1	Q8TCU6	1659 aa		32.59	■■■□□ 2.81
C12orf42-208	ENST00000548883	SPAG9	O60271	1321 aa	Known RBP	32.58	■■■□□ 2.81
C12orf42-208	ENST00000548883	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.57	■■■□□ 2.8
C12orf42-208	ENST00000548883	VPS8	Q8N3P4	1428 aa		32.54	■■■□□ 2.8
C12orf42-208	ENST00000548883	LOC105371045	A0A1W2PR82	267 aa		32.51	■■■□□ 2.8
C12orf42-208	ENST00000548883	C3	P01024	1663 aa		32.51	■■■□□ 2.79
C12orf42-208	ENST00000548883	NCOA2	Q15596	1464 aa		32.5	■■■□□ 2.79
C12orf42-208	ENST00000548883	ILDR1	Q86SU0	546 aa	Predicted RBP	32.5	■■■□□ 2.79
C12orf42-208	ENST00000548883	ESF1	Q9H501	851 aa	Known RBP	32.49	■■■□□ 2.79
C12orf42-208	ENST00000548883	PLXNC1	O60486	1568 aa		32.48	■■■□□ 2.79
C12orf42-208	ENST00000548883	CEBPA	P49715	358 aa	Predicted RBP	32.48	■■■□□ 2.79
C12orf42-208	ENST00000548883	HSPA2	P54652	639 aa		32.48	■■■□□ 2.79
C12orf42-208	ENST00000548883	ADGB	Q8N7X0	1667 aa		32.46	■■■□□ 2.79
C12orf42-208	ENST00000548883	CNTLN	Q9NXG0	1405 aa		32.46	■■■□□ 2.79
C12orf42-208	ENST00000548883	A2M	P01023	1474 aa		32.44	■■■□□ 2.78
C12orf42-208	ENST00000548883	MBD5	Q9P267	1494 aa		32.44	■■■□□ 2.78
C12orf42-208	ENST00000548883	ZNF644	Q9H582	1327 aa	Predicted RBP	32.43	■■■□□ 2.78
C12orf42-208	ENST00000548883	MROH2A	A6NES4	1674 aa		32.43	■■■□□ 2.78
C12orf42-208	ENST00000548883	SETD1B	Q9UPS6	1966 aa	Known RBP	32.42	■■■□□ 2.78
C12orf42-208	ENST00000548883	UHRF1BP1	Q6BDS2	1440 aa		32.41	■■■□□ 2.78
C12orf42-208	ENST00000548883	CAMSAP2	Q08AD1	1489 aa		32.4	■■■□□ 2.78
C12orf42-208	ENST00000548883	LRRC9	Q6ZRR7	1453 aa		32.4	■■■□□ 2.78
C12orf42-208	ENST00000548883	MAP3K1	Q13233	1512 aa		32.37	■■■□□ 2.77
C12orf42-208	ENST00000548883	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.37	■■■□□ 2.77
C12orf42-208	ENST00000548883	CCDC141	Q6ZP82	1450 aa		32.36	■■■□□ 2.77
C12orf42-208	ENST00000548883	CLTC	Q00610	1675 aa	Known RBP	32.32	■■■□□ 2.77
C12orf42-208	ENST00000548883	ARHGEF5	Q12774	1597 aa		32.3	■■■□□ 2.76
C12orf42-208	ENST00000548883	RSPH4A	Q5TD94	716 aa		32.27	■■■□□ 2.76
C12orf42-208	ENST00000548883	NPAT	Q14207	1427 aa		32.26	■■■□□ 2.75
C12orf42-208	ENST00000548883	STRC	Q7RTU9	1775 aa		32.24	■■■□□ 2.75
C12orf42-208	ENST00000548883	ZMYM3	Q14202	1370 aa		32.24	■■■□□ 2.75
C12orf42-208	ENST00000548883	DHX29	Q7Z478	1369 aa	Known RBP	32.22	■■■□□ 2.75
C12orf42-208	ENST00000548883	GGT6	Q6P531	493 aa		32.22	■■■□□ 2.75
C12orf42-208	ENST00000548883	FBXO41	Q8TF61	875 aa		32.21	■■■□□ 2.75
C12orf42-208	ENST00000548883	PPP6R1	Q9UPN7	881 aa		32.2	■■■□□ 2.74
C12orf42-208	ENST00000548883	KANK4	Q5T7N3	995 aa	Predicted RBP	32.19	■■■□□ 2.74
C12orf42-208	ENST00000548883	MYOM3	Q5VTT5	1437 aa		32.17	■■■□□ 2.74
C12orf42-208	ENST00000548883	MIA2	Q96PC5	1412 aa		32.17	■■■□□ 2.74
C12orf42-208	ENST00000548883	DMRT2	Q9Y5R5	561 aa		32.15	■■■□□ 2.74
C12orf42-208	ENST00000548883	MAST1	Q9Y2H9	1570 aa		32.15	■■■□□ 2.74
C12orf42-208	ENST00000548883	MYO3A	Q8NEV4	1616 aa		32.15	■■■□□ 2.74
C12orf42-208	ENST00000548883	FAM135A	Q9P2D6	1515 aa		32.14	■■■□□ 2.74
C12orf42-208	ENST00000548883	TSPY4	P0CV99	314 aa		32.14	■■■□□ 2.74
C12orf42-208	ENST00000548883	TSPY10	P0CW01	314 aa		32.14	■■■□□ 2.74
C12orf42-208	ENST00000548883	ZNF142	P52746	1687 aa	Predicted RBP	32.13	■■■□□ 2.73
C12orf42-208	ENST00000548883	APLP2	Q06481	763 aa		32.11	■■■□□ 2.73
C12orf42-208	ENST00000548883	PTPRK	Q15262	1439 aa		32.11	■■■□□ 2.73
C12orf42-208	ENST00000548883	KDM5D	Q9BY66	1539 aa		32.09	■■■□□ 2.73
C12orf42-208	ENST00000548883	KIF3B	O15066	747 aa		32.07	■■■□□ 2.72
C12orf42-208	ENST00000548883	NCOA1	Q15788	1441 aa		32.07	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms