RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 MICALL2Q8IY33 904 aa11.07□□□□□ -0.64
DEPDC4-205ENST00000548313 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
DEPDC4-205ENST00000548313 VARS2Q5ST30 1063 aaKnown RBP11.02□□□□□ -0.65
DEPDC4-205ENST00000548313 TMEM92Q6UXU6 159 aa11.01□□□□□ -0.65
DEPDC4-205ENST00000548313 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11□□□□□ -0.65
DEPDC4-205ENST00000548313 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
DEPDC4-205ENST00000548313 CHGAP10645 457 aaKnown RBP10.99□□□□□ -0.65
DEPDC4-205ENST00000548313 HS6ST3Q8IZP7 471 aa10.98□□□□□ -0.65
DEPDC4-205ENST00000548313 ZNF687Q8N1G0 1237 aa10.98□□□□□ -0.65
DEPDC4-205ENST00000548313 MS4A4AQ96JQ5 239 aa10.98□□□□□ -0.65
DEPDC4-205ENST00000548313 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
DEPDC4-205ENST00000548313 GPR153Q6NV75 609 aa10.97□□□□□ -0.65
DEPDC4-205ENST00000548313 RNF166Q96A37 237 aaPredicted RBP10.96□□□□□ -0.65
DEPDC4-205ENST00000548313 BBXQ8WY36 941 aaPredicted RBP10.95□□□□□ -0.66
DEPDC4-205ENST00000548313 STK25O00506 426 aa10.94□□□□□ -0.66
DEPDC4-205ENST00000548313 NLRP6P59044 892 aa10.94□□□□□ -0.66
DEPDC4-205ENST00000548313 DNAJC5Q9H3Z4 198 aa10.93□□□□□ -0.66
DEPDC4-205ENST00000548313 MYT1LQ9UL68 1186 aa10.92□□□□□ -0.66
DEPDC4-205ENST00000548313 PTGER2P43116 358 aa10.91□□□□□ -0.66
DEPDC4-205ENST00000548313 BCL11BQ9C0K0 894 aaPredicted RBP10.9□□□□□ -0.66
DEPDC4-205ENST00000548313 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.9□□□□□ -0.66
DEPDC4-205ENST00000548313 ARSIQ5FYB1 569 aa10.89□□□□□ -0.67
DEPDC4-205ENST00000548313 STK24Q9Y6E0 443 aa10.89□□□□□ -0.67
DEPDC4-205ENST00000548313 FBXO22Q8NEZ5 403 aa10.86□□□□□ -0.67
DEPDC4-205ENST00000548313 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
DEPDC4-205ENST00000548313 ANKRD13DQ6ZTN6 518 aa10.82□□□□□ -0.68
DEPDC4-205ENST00000548313 PLCB2Q00722 1185 aa10.81□□□□□ -0.68
DEPDC4-205ENST00000548313 SPRYD3Q8NCJ5 442 aa10.79□□□□□ -0.68
DEPDC4-205ENST00000548313 KHSRPQ92945 711 aaKnown RBP eCLIP10.79□□□□□ -0.68
DEPDC4-205ENST00000548313 MFRPQ9BY79 579 aa10.79□□□□□ -0.68
DEPDC4-205ENST00000548313 RYDENQ9NUL5 291 aaKnown RBP10.79□□□□□ -0.68
DEPDC4-205ENST00000548313 KIF3CO14782 793 aa10.77□□□□□ -0.69
DEPDC4-205ENST00000548313 NKX1-1Q15270 411 aaPredicted RBP10.77□□□□□ -0.69
DEPDC4-205ENST00000548313 C2orf72A6NCS6 295 aa10.76□□□□□ -0.69
DEPDC4-205ENST00000548313 PBX2P40425 430 aa10.76□□□□□ -0.69
DEPDC4-205ENST00000548313 LSM11P83369 360 aaKnown RBP eCLIP10.76□□□□□ -0.69
DEPDC4-205ENST00000548313 PAXIP1Q6ZW49 1069 aaPredicted RBP10.76□□□□□ -0.69
DEPDC4-205ENST00000548313 SLC34A2O95436 690 aa10.73□□□□□ -0.69
DEPDC4-205ENST00000548313 CFAP44Q96MT7 982 aa10.73□□□□□ -0.69
DEPDC4-205ENST00000548313 GTPBP6O43824 516 aaPredicted RBP10.72□□□□□ -0.69
DEPDC4-205ENST00000548313 NUDT7P0C024 238 aa10.72□□□□□ -0.69
DEPDC4-205ENST00000548313 TMC2Q8TDI7 906 aa10.71□□□□□ -0.69
DEPDC4-205ENST00000548313 PCDHGA4Q9Y5G9 962 aa10.7□□□□□ -0.7
DEPDC4-205ENST00000548313 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
DEPDC4-205ENST00000548313 LHX6Q9UPM6 363 aa10.68□□□□□ -0.7
DEPDC4-205ENST00000548313 PSDA5PKW4 1024 aaPredicted RBP10.66□□□□□ -0.7
DEPDC4-205ENST00000548313 POTEEQ6S8J3 1075 aa10.62□□□□□ -0.71
DEPDC4-205ENST00000548313 AXIN2Q9Y2T1 843 aa10.62□□□□□ -0.71
DEPDC4-205ENST00000548313 ARHGAP33O14559 1287 aa10.61□□□□□ -0.71
DEPDC4-205ENST00000548313 HAP1P54257 671 aaPredicted RBP10.61□□□□□ -0.71
DEPDC4-205ENST00000548313 HCSTQ9UBK5 93 aa10.61□□□□□ -0.71
DEPDC4-205ENST00000548313 ADGRD1Q6QNK2 874 aa10.57□□□□□ -0.72
DEPDC4-205ENST00000548313 PPP1R37O75864 691 aa10.56□□□□□ -0.72
DEPDC4-205ENST00000548313 PTCD2Q8WV60 388 aaKnown RBP10.56□□□□□ -0.72
DEPDC4-205ENST00000548313 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
DEPDC4-205ENST00000548313 TK2O00142 265 aa10.55□□□□□ -0.72
DEPDC4-205ENST00000548313 TSHZ2Q9NRE2 1034 aa10.54□□□□□ -0.72
DEPDC4-205ENST00000548313 KDM4FA0A1W2PPD8 638 aa10.53□□□□□ -0.72
DEPDC4-205ENST00000548313 VSIG10Q8N0Z9 540 aa10.53□□□□□ -0.72
DEPDC4-205ENST00000548313 TBC1D12O60347 775 aa10.52□□□□□ -0.73
DEPDC4-205ENST00000548313 FOXK1P85037 733 aa10.52□□□□□ -0.73
DEPDC4-205ENST00000548313 PPP4R3BQ5MIZ7 849 aa10.5□□□□□ -0.73
DEPDC4-205ENST00000548313 PLPP6Q8IY26 295 aa10.5□□□□□ -0.73
DEPDC4-205ENST00000548313 GPHNQ9NQX3 736 aaPredicted RBP10.5□□□□□ -0.73
DEPDC4-205ENST00000548313 HRO43593 1189 aa10.48□□□□□ -0.73
DEPDC4-205ENST00000548313 STAC3Q96MF2 364 aa10.48□□□□□ -0.73
DEPDC4-205ENST00000548313 DMRTA1Q5VZB9 504 aa10.47□□□□□ -0.73
DEPDC4-205ENST00000548313 KCNH8Q96L42 1107 aa10.47□□□□□ -0.73
DEPDC4-205ENST00000548313 PSEN2P49810 448 aa10.46□□□□□ -0.73
DEPDC4-205ENST00000548313 DSG2Q14126 1118 aa10.44□□□□□ -0.74
DEPDC4-205ENST00000548313 KCTD12Q96CX2 325 aaKnown RBP10.41□□□□□ -0.74
DEPDC4-205ENST00000548313 KDM2AQ9Y2K7 1162 aa10.41□□□□□ -0.74
DEPDC4-205ENST00000548313 CADPS2Q86UW7 1296 aa10.39□□□□□ -0.75
DEPDC4-205ENST00000548313 KCNK17Q96T54 332 aa10.39□□□□□ -0.75
DEPDC4-205ENST00000548313 PDE4AP27815 886 aa10.37□□□□□ -0.75
DEPDC4-205ENST00000548313 OXER1Q8TDS5 423 aa10.35□□□□□ -0.75
DEPDC4-205ENST00000548313 VPS9D1Q9Y2B5 631 aa10.35□□□□□ -0.75
DEPDC4-205ENST00000548313 SLC4A5Q9BY07 1137 aa10.34□□□□□ -0.75
DEPDC4-205ENST00000548313 CRISPLD2Q9H0B8 497 aa10.34□□□□□ -0.75
DEPDC4-205ENST00000548313 WDR70Q9NW82 654 aa10.34□□□□□ -0.75
DEPDC4-205ENST00000548313 ZNF454Q8N9F8 522 aa10.32□□□□□ -0.76
DEPDC4-205ENST00000548313 BCL2L12Q9HB09 334 aa10.32□□□□□ -0.76
DEPDC4-205ENST00000548313 NCKAP5LQ9HCH0 1330 aa10.32□□□□□ -0.76
DEPDC4-205ENST00000548313 UPF1Q92900 1129 aaKnown RBP eCLIP10.31□□□□□ -0.76
DEPDC4-205ENST00000548313 LARP6Q9BRS8 491 aaKnown RBP10.3□□□□□ -0.76
DEPDC4-205ENST00000548313 PTPN5P54829 565 aa10.29□□□□□ -0.76
DEPDC4-205ENST00000548313 MFSD10Q14728 455 aa10.29□□□□□ -0.76
DEPDC4-205ENST00000548313 RGS20O76081 388 aa10.28□□□□□ -0.76
DEPDC4-205ENST00000548313 PTPREP23469 700 aa10.28□□□□□ -0.76
DEPDC4-205ENST00000548313 PPP1R15BQ5SWA1 713 aa10.28□□□□□ -0.76
DEPDC4-205ENST00000548313 FOSBP53539 338 aa10.27□□□□□ -0.77
DEPDC4-205ENST00000548313 IFFO2Q5TF58 517 aa10.27□□□□□ -0.77
DEPDC4-205ENST00000548313 DDX27Q96GQ7 796 aaKnown RBP10.27□□□□□ -0.77
DEPDC4-205ENST00000548313 GOLGA8CPA6NN73 597 aa10.26□□□□□ -0.77
DEPDC4-205ENST00000548313 BHMG1C9JSJ3 638 aaPredicted RBP10.26□□□□□ -0.77
DEPDC4-205ENST00000548313 THSD4Q6ZMP0 1018 aa10.24□□□□□ -0.77
DEPDC4-205ENST00000548313 ANO8Q9HCE9 1232 aaPredicted RBP10.24□□□□□ -0.77
DEPDC4-205ENST00000548313 P3H3Q8IVL6 736 aa10.23□□□□□ -0.77
DEPDC4-205ENST00000548313 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
DEPDC4-205ENST00000548313 JPH4Q96JJ6 628 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms