RNA–Protein interactions for RNA: ENST00000548209.5

LETMD1-213, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-213ENST00000548209 UHRF1BP1Q6BDS2 1440 aa17.26■□□□□ 0.35
LETMD1-213ENST00000548209 MAGI2Q86UL8 1455 aa17.25■□□□□ 0.35
LETMD1-213ENST00000548209 PTPRTO14522 1441 aa17.25■□□□□ 0.35
LETMD1-213ENST00000548209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
LETMD1-213ENST00000548209 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
LETMD1-213ENST00000548209 P3H3Q8IVL6 736 aa17.23■□□□□ 0.35
LETMD1-213ENST00000548209 CEBPAP49715 358 aaPredicted RBP17.22■□□□□ 0.35
LETMD1-213ENST00000548209 C3P01024 1663 aa17.2■□□□□ 0.34
LETMD1-213ENST00000548209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.19■□□□□ 0.34
LETMD1-213ENST00000548209 SAMD9Q5K651 1589 aa17.19■□□□□ 0.34
LETMD1-213ENST00000548209 C9orf84Q5VXU9 1444 aa17.17■□□□□ 0.34
LETMD1-213ENST00000548209 ATP10AO60312 1499 aa17.17■□□□□ 0.34
LETMD1-213ENST00000548209 NUP153P49790 1475 aaKnown RBP17.15■□□□□ 0.34
LETMD1-213ENST00000548209 MED1Q15648 1581 aaPredicted RBP17.15■□□□□ 0.34
LETMD1-213ENST00000548209 SUPT6HQ7KZ85 1726 aaKnown RBP17.11■□□□□ 0.33
LETMD1-213ENST00000548209 PLEKHD1A6NEE1 506 aa17.11■□□□□ 0.33
LETMD1-213ENST00000548209 UBAP1LF5GYI3 381 aa17.11■□□□□ 0.33
LETMD1-213ENST00000548209 SCAPERQ9BY12 1400 aa17.11■□□□□ 0.33
LETMD1-213ENST00000548209 PRXQ9BXM0 1461 aa17.11■□□□□ 0.33
LETMD1-213ENST00000548209 MYO5CQ9NQX4 1742 aa17.1■□□□□ 0.33
LETMD1-213ENST00000548209 NCOA1Q15788 1441 aa17.09■□□□□ 0.33
LETMD1-213ENST00000548209 CAMSAP1Q5T5Y3 1602 aa17.06■□□□□ 0.32
LETMD1-213ENST00000548209 DIP2CQ9Y2E4 1556 aa17.02■□□□□ 0.32
LETMD1-213ENST00000548209 TRAPPC8Q9Y2L5 1435 aa17.02■□□□□ 0.31
LETMD1-213ENST00000548209 ZNF335Q9H4Z2 1342 aaPredicted RBP17.01■□□□□ 0.31
LETMD1-213ENST00000548209 PLCH2O75038 1416 aa17.01■□□□□ 0.31
LETMD1-213ENST00000548209 REREQ9P2R6 1566 aa17.01■□□□□ 0.31
LETMD1-213ENST00000548209 KDM5CP41229 1560 aa17■□□□□ 0.31
LETMD1-213ENST00000548209 ABCA6Q8N139 1617 aa16.99■□□□□ 0.31
LETMD1-213ENST00000548209 ZNF518AQ6AHZ1 1483 aa16.99■□□□□ 0.31
LETMD1-213ENST00000548209 ESF1Q9H501 851 aaKnown RBP16.99■□□□□ 0.31
LETMD1-213ENST00000548209 MROH2AA6NES4 1674 aa16.97■□□□□ 0.31
LETMD1-213ENST00000548209 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
LETMD1-213ENST00000548209 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
LETMD1-213ENST00000548209 MYT1LQ9UL68 1186 aa16.97■□□□□ 0.31
LETMD1-213ENST00000548209 HSPA1LP34931 641 aa16.96■□□□□ 0.31
LETMD1-213ENST00000548209 ZNF142P52746 1687 aaPredicted RBP16.96■□□□□ 0.31
LETMD1-213ENST00000548209 AGLP35573 1532 aa16.96■□□□□ 0.3
LETMD1-213ENST00000548209 CDK13Q14004 1512 aaKnown RBP16.96■□□□□ 0.3
LETMD1-213ENST00000548209 NCKAP5LQ9HCH0 1330 aa16.94■□□□□ 0.3
LETMD1-213ENST00000548209 EFCAB2Q5VUJ9 269 aa16.93■□□□□ 0.3
LETMD1-213ENST00000548209 MYO3AQ8NEV4 1616 aa16.92■□□□□ 0.3
LETMD1-213ENST00000548209 CNTLNQ9NXG0 1405 aa16.92■□□□□ 0.3
LETMD1-213ENST00000548209 RANGAP1P46060 587 aaPredicted RBP16.91■□□□□ 0.3
LETMD1-213ENST00000548209 PIP4K2BP78356 416 aa16.91■□□□□ 0.3
LETMD1-213ENST00000548209 LOC105371045A0A1W2PR82 267 aa16.9■□□□□ 0.3
LETMD1-213ENST00000548209 ARHGAP5Q13017 1502 aa16.9■□□□□ 0.3
LETMD1-213ENST00000548209 KIF14Q15058 1648 aa16.89■□□□□ 0.29
LETMD1-213ENST00000548209 NPATQ14207 1427 aa16.89■□□□□ 0.29
LETMD1-213ENST00000548209 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
LETMD1-213ENST00000548209 AFAP1Q8N556 730 aa16.89■□□□□ 0.29
LETMD1-213ENST00000548209 CDC42BPBQ9Y5S2 1711 aa16.89■□□□□ 0.29
LETMD1-213ENST00000548209 POLR1AO95602 1720 aaPredicted RBP16.88■□□□□ 0.29
LETMD1-213ENST00000548209 CLTCQ00610 1675 aaKnown RBP16.87■□□□□ 0.29
LETMD1-213ENST00000548209 ITSN2Q9NZM3 1697 aa16.87■□□□□ 0.29
LETMD1-213ENST00000548209 KIDINS220Q9ULH0 1771 aa16.87■□□□□ 0.29
LETMD1-213ENST00000548209 MLH3Q9UHC1 1453 aa16.86■□□□□ 0.29
LETMD1-213ENST00000548209 CEP170BQ9Y4F5 1589 aaPredicted RBP16.86■□□□□ 0.29
LETMD1-213ENST00000548209 TOM1O60784 492 aa16.86■□□□□ 0.29
LETMD1-213ENST00000548209 PKD2Q13563 968 aa16.86■□□□□ 0.29
LETMD1-213ENST00000548209 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
LETMD1-213ENST00000548209 CPS1P31327 1500 aa16.83■□□□□ 0.28
LETMD1-213ENST00000548209 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
LETMD1-213ENST00000548209 ZMYM3Q14202 1370 aa16.79■□□□□ 0.28
LETMD1-213ENST00000548209 ABCC1P33527 1531 aa16.79■□□□□ 0.28
LETMD1-213ENST00000548209 PREX2Q70Z35 1606 aa16.78■□□□□ 0.28
LETMD1-213ENST00000548209 PTPRKQ15262 1439 aa16.76■□□□□ 0.27
LETMD1-213ENST00000548209 SHANK2Q9UPX8 1470 aa16.75■□□□□ 0.27
LETMD1-213ENST00000548209 DNMT1P26358 1616 aaKnown RBP16.75■□□□□ 0.27
LETMD1-213ENST00000548209 ALKQ9UM73 1620 aa16.75■□□□□ 0.27
LETMD1-213ENST00000548209 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
LETMD1-213ENST00000548209 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
LETMD1-213ENST00000548209 LRRIQ1Q96JM4 1722 aa16.75■□□□□ 0.27
LETMD1-213ENST00000548209 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
LETMD1-213ENST00000548209 NEURL4Q96JN8 1562 aa16.73■□□□□ 0.27
LETMD1-213ENST00000548209 CLIP1P30622 1438 aa16.73■□□□□ 0.27
LETMD1-213ENST00000548209 CDC42BPAQ5VT25 1732 aa16.73■□□□□ 0.27
LETMD1-213ENST00000548209 TROQ12816 1431 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-213ENST00000548209 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-213ENST00000548209 A2ML1A8K2U0 1454 aa16.7■□□□□ 0.26
LETMD1-213ENST00000548209 SAMD9LQ8IVG5 1584 aa16.69■□□□□ 0.26
LETMD1-213ENST00000548209 VWDEQ8N2E2 1590 aa16.68■□□□□ 0.26
LETMD1-213ENST00000548209 SETD1AO15047 1707 aaKnown RBP16.68■□□□□ 0.26
LETMD1-213ENST00000548209 RNF17Q9BXT8 1623 aaKnown RBP16.68■□□□□ 0.26
LETMD1-213ENST00000548209 RGS17Q9UGC6 210 aaPredicted RBP16.68■□□□□ 0.26
LETMD1-213ENST00000548209 STRCP1A6NGW2 1772 aa16.67■□□□□ 0.26
LETMD1-213ENST00000548209 PLXNC1O60486 1568 aa16.66■□□□□ 0.26
LETMD1-213ENST00000548209 FMN1Q68DA7 1419 aa16.66■□□□□ 0.26
LETMD1-213ENST00000548209 ATP7AQ04656 1500 aa16.63■□□□□ 0.25
LETMD1-213ENST00000548209 SYNMO15061 1565 aa16.63■□□□□ 0.25
LETMD1-213ENST00000548209 IQGAP1P46940 1657 aa16.62■□□□□ 0.25
LETMD1-213ENST00000548209 ADGBQ8N7X0 1667 aa16.62■□□□□ 0.25
LETMD1-213ENST00000548209 SYCP2Q9BX26 1530 aa16.61■□□□□ 0.25
LETMD1-213ENST00000548209 INO80Q9ULG1 1556 aaPredicted RBP16.61■□□□□ 0.25
LETMD1-213ENST00000548209 DEPDC5O75140 1603 aa16.6■□□□□ 0.25
LETMD1-213ENST00000548209 GGT6Q6P531 493 aa16.6■□□□□ 0.25
LETMD1-213ENST00000548209 SPAG9O60271 1321 aaKnown RBP16.6■□□□□ 0.25
LETMD1-213ENST00000548209 EEA1Q15075 1411 aa16.6■□□□□ 0.25
LETMD1-213ENST00000548209 A2MP01023 1474 aa16.6■□□□□ 0.25
LETMD1-213ENST00000548209 PCGF6Q9BYE7 350 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms