RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 ASXL2Q76L83 1435 aa18.49■□□□□ 0.55
RAB5B-204ENST00000548068 CROCC2H7BZ55 1655 aa18.48■□□□□ 0.55
RAB5B-204ENST00000548068 ABCA9Q8IUA7 1624 aa18.48■□□□□ 0.55
RAB5B-204ENST00000548068 AKNAQ7Z591 1439 aa18.48■□□□□ 0.55
RAB5B-204ENST00000548068 SETD5Q9C0A6 1442 aa18.48■□□□□ 0.55
RAB5B-204ENST00000548068 ARHGAP5Q13017 1502 aa18.47■□□□□ 0.55
RAB5B-204ENST00000548068 DAPK1P53355 1430 aa18.47■□□□□ 0.55
RAB5B-204ENST00000548068 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
RAB5B-204ENST00000548068 GCC2Q8IWJ2 1684 aa18.46■□□□□ 0.55
RAB5B-204ENST00000548068 ADGBQ8N7X0 1667 aa18.46■□□□□ 0.55
RAB5B-204ENST00000548068 CCER1Q8TC90 406 aaPredicted RBP18.45■□□□□ 0.54
RAB5B-204ENST00000548068 HFM1A2PYH4 1435 aa18.45■□□□□ 0.54
RAB5B-204ENST00000548068 ARHGEF5Q12774 1597 aa18.45■□□□□ 0.54
RAB5B-204ENST00000548068 PLEKHH2Q8IVE3 1493 aa18.45■□□□□ 0.54
RAB5B-204ENST00000548068 MAPKBP1O60336 1514 aa18.44■□□□□ 0.54
RAB5B-204ENST00000548068 KCNH8Q96L42 1107 aa18.44■□□□□ 0.54
RAB5B-204ENST00000548068 SAMD9LQ8IVG5 1584 aa18.43■□□□□ 0.54
RAB5B-204ENST00000548068 PLCH2O75038 1416 aa18.43■□□□□ 0.54
RAB5B-204ENST00000548068 PTPRKQ15262 1439 aa18.42■□□□□ 0.54
RAB5B-204ENST00000548068 SHANK2Q9UPX8 1470 aa18.42■□□□□ 0.54
RAB5B-204ENST00000548068 ROCK1Q13464 1354 aa18.42■□□□□ 0.54
RAB5B-204ENST00000548068 ABCC5O15440 1437 aa18.41■□□□□ 0.54
RAB5B-204ENST00000548068 ZNF777Q9ULD5 760 aaPredicted RBP18.41■□□□□ 0.54
RAB5B-204ENST00000548068 RAB3GAP2Q9H2M9 1393 aa18.41■□□□□ 0.54
RAB5B-204ENST00000548068 ZNF644Q9H582 1327 aaPredicted RBP18.4■□□□□ 0.54
RAB5B-204ENST00000548068 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
RAB5B-204ENST00000548068 CFAP74Q9C0B2 1584 aa18.38■□□□□ 0.53
RAB5B-204ENST00000548068 RSPH4AQ5TD94 716 aa18.37■□□□□ 0.53
RAB5B-204ENST00000548068 ACIN1Q9UKV3 1341 aaKnown RBP18.37■□□□□ 0.53
RAB5B-204ENST00000548068 NAIPQ13075 1403 aa18.37■□□□□ 0.53
RAB5B-204ENST00000548068 KIAA1107Q9UPP5 1409 aa18.37■□□□□ 0.53
RAB5B-204ENST00000548068 ADGRL2O95490 1459 aa18.37■□□□□ 0.53
RAB5B-204ENST00000548068 CCDC141Q6ZP82 1450 aa18.37■□□□□ 0.53
RAB5B-204ENST00000548068 EFCAB2Q5VUJ9 269 aa18.36■□□□□ 0.53
RAB5B-204ENST00000548068 SYCP2Q9BX26 1530 aa18.35■□□□□ 0.53
RAB5B-204ENST00000548068 ABCC1P33527 1531 aa18.34■□□□□ 0.53
RAB5B-204ENST00000548068 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
RAB5B-204ENST00000548068 MBD5Q9P267 1494 aa18.33■□□□□ 0.53
RAB5B-204ENST00000548068 CLSPNQ9HAW4 1339 aa18.33■□□□□ 0.53
RAB5B-204ENST00000548068 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
RAB5B-204ENST00000548068 DHX57Q6P158 1386 aaKnown RBP18.31■□□□□ 0.52
RAB5B-204ENST00000548068 ANKRD30AQ9BXX3 1397 aa18.31■□□□□ 0.52
RAB5B-204ENST00000548068 CHIC2Q9UKJ5 165 aa18.31■□□□□ 0.52
RAB5B-204ENST00000548068 FANCAO15360 1455 aa18.31■□□□□ 0.52
RAB5B-204ENST00000548068 GLI2P10070 1586 aa18.3■□□□□ 0.52
RAB5B-204ENST00000548068 TSPY4P0CV99 314 aa18.3■□□□□ 0.52
RAB5B-204ENST00000548068 TSPY10P0CW01 314 aa18.3■□□□□ 0.52
RAB5B-204ENST00000548068 NCOA1Q15788 1441 aa18.28■□□□□ 0.52
RAB5B-204ENST00000548068 CD109Q6YHK3 1445 aa18.27■□□□□ 0.52
RAB5B-204ENST00000548068 HNRNPMP52272 730 aaKnown RBP eCLIP18.27■□□□□ 0.52
RAB5B-204ENST00000548068 RRP7BPQ9NSQ0 103 aa18.27■□□□□ 0.52
RAB5B-204ENST00000548068 MAP3K4Q9Y6R4 1608 aa18.27■□□□□ 0.51
RAB5B-204ENST00000548068 PLXNC1O60486 1568 aa18.26■□□□□ 0.51
RAB5B-204ENST00000548068 DIP2BQ9P265 1576 aa18.24■□□□□ 0.51
RAB5B-204ENST00000548068 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
RAB5B-204ENST00000548068 ADGRL1O94910 1474 aa18.23■□□□□ 0.51
RAB5B-204ENST00000548068 NEO1Q92859 1461 aa18.22■□□□□ 0.51
RAB5B-204ENST00000548068 KDM6BO15054 1643 aa18.22■□□□□ 0.51
RAB5B-204ENST00000548068 KIF15Q9NS87 1388 aa18.19■□□□□ 0.5
RAB5B-204ENST00000548068 RTEL1-TNFRSF6BF6WH68 1400 aa18.19■□□□□ 0.5
RAB5B-204ENST00000548068 ANKRD50Q9ULJ7 1429 aa18.18■□□□□ 0.5
RAB5B-204ENST00000548068 INO80Q9ULG1 1556 aaPredicted RBP18.17■□□□□ 0.5
RAB5B-204ENST00000548068 SCAPERQ9BY12 1400 aa18.17■□□□□ 0.5
RAB5B-204ENST00000548068 TRAPPC8Q9Y2L5 1435 aa18.17■□□□□ 0.5
RAB5B-204ENST00000548068 ZNF518AQ6AHZ1 1483 aa18.16■□□□□ 0.5
RAB5B-204ENST00000548068 ZFYVE16Q7Z3T8 1539 aa18.16■□□□□ 0.5
RAB5B-204ENST00000548068 DUOX2Q9NRD8 1548 aa18.16■□□□□ 0.5
RAB5B-204ENST00000548068 ATP7AQ04656 1500 aa18.14■□□□□ 0.49
RAB5B-204ENST00000548068 SPAG9O60271 1321 aaKnown RBP18.14■□□□□ 0.49
RAB5B-204ENST00000548068 TEX14Q8IWB6 1497 aa18.14■□□□□ 0.49
RAB5B-204ENST00000548068 TRIM52Q96A61 297 aa18.13■□□□□ 0.49
RAB5B-204ENST00000548068 KIF13AQ9H1H9 1805 aa18.12■□□□□ 0.49
RAB5B-204ENST00000548068 POGZQ7Z3K3 1410 aa18.12■□□□□ 0.49
RAB5B-204ENST00000548068 ERBINQ96RT1 1412 aa18.12■□□□□ 0.49
RAB5B-204ENST00000548068 KDM5CP41229 1560 aa18.12■□□□□ 0.49
RAB5B-204ENST00000548068 FAM69CQ0P6D2 419 aa18.11■□□□□ 0.49
RAB5B-204ENST00000548068 KDM5DQ9BY66 1539 aa18.11■□□□□ 0.49
RAB5B-204ENST00000548068 UNC13BO14795 1591 aa18.09■□□□□ 0.49
RAB5B-204ENST00000548068 PPRC1Q5VV67 1664 aaKnown RBP18.09■□□□□ 0.49
RAB5B-204ENST00000548068 HECW2Q9P2P5 1572 aa18.08■□□□□ 0.49
RAB5B-204ENST00000548068 DENND4BO75064 1496 aaPredicted RBP18.08■□□□□ 0.49
RAB5B-204ENST00000548068 EIF2AK4Q9P2K8 1649 aaKnown RBP18.07■□□□□ 0.48
RAB5B-204ENST00000548068 TSPOAP1O95153 1857 aa18.07■□□□□ 0.48
RAB5B-204ENST00000548068 KIDINS220Q9ULH0 1771 aa18.07■□□□□ 0.48
RAB5B-204ENST00000548068 RICTORQ6R327 1708 aa18.06■□□□□ 0.48
RAB5B-204ENST00000548068 AFAP1Q8N556 730 aa18.06■□□□□ 0.48
RAB5B-204ENST00000548068 MLH3Q9UHC1 1453 aa18.06■□□□□ 0.48
RAB5B-204ENST00000548068 PZPP20742 1482 aa18.05■□□□□ 0.48
RAB5B-204ENST00000548068 MPHOSPH9Q99550 1183 aa18.04■□□□□ 0.48
RAB5B-204ENST00000548068 MAGI2Q86UL8 1455 aa18.02■□□□□ 0.48
RAB5B-204ENST00000548068 IQGAP3Q86VI3 1631 aa18.01■□□□□ 0.47
RAB5B-204ENST00000548068 SLC4A1APQ9BWU0 796 aaKnown RBP18.01■□□□□ 0.47
RAB5B-204ENST00000548068 MYT1LQ9UL68 1186 aa18.01■□□□□ 0.47
RAB5B-204ENST00000548068 TIMELESSQ9UNS1 1208 aa18.01■□□□□ 0.47
RAB5B-204ENST00000548068 NUP155O75694 1391 aa18.01■□□□□ 0.47
RAB5B-204ENST00000548068 ZMYM4Q5VZL5 1548 aa18■□□□□ 0.47
RAB5B-204ENST00000548068 DEPDC5O75140 1603 aa18■□□□□ 0.47
RAB5B-204ENST00000548068 FAM135AQ9P2D6 1515 aa17.98■□□□□ 0.47
RAB5B-204ENST00000548068 DHX29Q7Z478 1369 aaKnown RBP17.98■□□□□ 0.47
RAB5B-204ENST00000548068 FRMPD1Q5SYB0 1578 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms