RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 POGZQ7Z3K3 1410 aa30.04■■■□□ 2.4
CHMP1A-203ENST00000547614 ARHGAP5Q13017 1502 aa30.01■■■□□ 2.4
CHMP1A-203ENST00000547614 ARID4BQ4LE39 1312 aaPredicted RBP30■■■□□ 2.39
CHMP1A-203ENST00000547614 CEP162Q5TB80 1403 aa29.99■■■□□ 2.39
CHMP1A-203ENST00000547614 ZFYVE16Q7Z3T8 1539 aa29.98■■■□□ 2.39
CHMP1A-203ENST00000547614 ADAMTSL3P82987 1691 aa29.98■■■□□ 2.39
CHMP1A-203ENST00000547614 YEATS2Q9ULM3 1422 aa29.96■■■□□ 2.39
CHMP1A-203ENST00000547614 CDC42BPBQ9Y5S2 1711 aa29.95■■■□□ 2.38
CHMP1A-203ENST00000547614 BCORL1Q5H9F3 1711 aa29.94■■■□□ 2.38
CHMP1A-203ENST00000547614 ZNF518AQ6AHZ1 1483 aa29.93■■■□□ 2.38
CHMP1A-203ENST00000547614 PREX2Q70Z35 1606 aa29.93■■■□□ 2.38
CHMP1A-203ENST00000547614 AFAP1Q8N556 730 aa29.89■■■□□ 2.38
CHMP1A-203ENST00000547614 PTPRMP28827 1452 aa29.88■■■□□ 2.37
CHMP1A-203ENST00000547614 ATP10AO60312 1499 aa29.87■■■□□ 2.37
CHMP1A-203ENST00000547614 KDM5CP41229 1560 aa29.86■■■□□ 2.37
CHMP1A-203ENST00000547614 LOC105371045A0A1W2PR82 267 aa29.86■■■□□ 2.37
CHMP1A-203ENST00000547614 CDC42BPAQ5VT25 1732 aa29.85■■■□□ 2.37
CHMP1A-203ENST00000547614 MTUS2Q5JR59 1369 aa29.85■■■□□ 2.37
CHMP1A-203ENST00000547614 MADDQ8WXG6 1647 aa29.82■■■□□ 2.36
CHMP1A-203ENST00000547614 ABCC1P33527 1531 aa29.82■■■□□ 2.36
CHMP1A-203ENST00000547614 GPATCH8Q9UKJ3 1502 aaKnown RBP29.82■■■□□ 2.36
CHMP1A-203ENST00000547614 C9orf84Q5VXU9 1444 aa29.81■■■□□ 2.36
CHMP1A-203ENST00000547614 HECW2Q9P2P5 1572 aa29.81■■■□□ 2.36
CHMP1A-203ENST00000547614 ARHGEF12Q9NZN5 1544 aa29.8■■■□□ 2.36
CHMP1A-203ENST00000547614 SIGLEC1Q9BZZ2 1709 aa29.79■■■□□ 2.36
CHMP1A-203ENST00000547614 MLH3Q9UHC1 1453 aa29.79■■■□□ 2.36
CHMP1A-203ENST00000547614 TRAPPC8Q9Y2L5 1435 aa29.79■■■□□ 2.36
CHMP1A-203ENST00000547614 CCNB3Q8WWL7 1395 aa29.77■■■□□ 2.36
CHMP1A-203ENST00000547614 MYT1LQ9UL68 1186 aa29.76■■■□□ 2.35
CHMP1A-203ENST00000547614 CFDP1Q9UEE9 299 aaPredicted RBP29.75■■■□□ 2.35
CHMP1A-203ENST00000547614 ZNF777Q9ULD5 760 aaPredicted RBP29.75■■■□□ 2.35
CHMP1A-203ENST00000547614 ITSN2Q9NZM3 1697 aa29.75■■■□□ 2.35
CHMP1A-203ENST00000547614 EHBP1L1Q8N3D4 1523 aa29.73■■■□□ 2.35
CHMP1A-203ENST00000547614 MLECQ14165 292 aa29.72■■■□□ 2.35
CHMP1A-203ENST00000547614 SAMD9LQ8IVG5 1584 aa29.72■■■□□ 2.35
CHMP1A-203ENST00000547614 RIMS1Q86UR5 1692 aaKnown RBP29.71■■■□□ 2.35
CHMP1A-203ENST00000547614 KIAA1107Q9UPP5 1409 aa29.71■■■□□ 2.35
CHMP1A-203ENST00000547614 DIP2CQ9Y2E4 1556 aa29.7■■■□□ 2.35
CHMP1A-203ENST00000547614 REREQ9P2R6 1566 aa29.69■■■□□ 2.34
CHMP1A-203ENST00000547614 PLEKHH2Q8IVE3 1493 aa29.69■■■□□ 2.34
CHMP1A-203ENST00000547614 VPS8Q8N3P4 1428 aa29.68■■■□□ 2.34
CHMP1A-203ENST00000547614 HNRNPMP52272 730 aaKnown RBP eCLIP29.66■■■□□ 2.34
CHMP1A-203ENST00000547614 SYCP2Q9BX26 1530 aa29.66■■■□□ 2.34
CHMP1A-203ENST00000547614 ABCA6Q8N139 1617 aa29.65■■■□□ 2.34
CHMP1A-203ENST00000547614 KIDINS220Q9ULH0 1771 aa29.63■■■□□ 2.33
CHMP1A-203ENST00000547614 TIAM1Q13009 1591 aa29.63■■■□□ 2.33
CHMP1A-203ENST00000547614 FER1L4A9Z1Z3 1794 aa29.62■■■□□ 2.33
CHMP1A-203ENST00000547614 SPAG9O60271 1321 aaKnown RBP29.61■■■□□ 2.33
CHMP1A-203ENST00000547614 AGLP35573 1532 aa29.61■■■□□ 2.33
CHMP1A-203ENST00000547614 NCOA2Q15596 1464 aa29.56■■■□□ 2.32
CHMP1A-203ENST00000547614 SUPT6HQ7KZ85 1726 aaKnown RBP29.56■■■□□ 2.32
CHMP1A-203ENST00000547614 ZNF644Q9H582 1327 aaPredicted RBP29.55■■■□□ 2.32
CHMP1A-203ENST00000547614 LMTK3Q96Q04 1460 aa29.54■■■□□ 2.32
CHMP1A-203ENST00000547614 PLPPR3Q6T4P5 718 aa29.53■■■□□ 2.32
CHMP1A-203ENST00000547614 MAP3K1Q13233 1512 aa29.53■■■□□ 2.32
CHMP1A-203ENST00000547614 ATP7AQ04656 1500 aa29.51■■■□□ 2.32
CHMP1A-203ENST00000547614 LRRC9Q6ZRR7 1453 aa29.51■■■□□ 2.31
CHMP1A-203ENST00000547614 MBD5Q9P267 1494 aa29.51■■■□□ 2.31
CHMP1A-203ENST00000547614 INO80Q9ULG1 1556 aaPredicted RBP29.48■■■□□ 2.31
CHMP1A-203ENST00000547614 RSPH4AQ5TD94 716 aa29.46■■■□□ 2.31
CHMP1A-203ENST00000547614 ESF1Q9H501 851 aaKnown RBP29.46■■■□□ 2.31
CHMP1A-203ENST00000547614 CEBPAP49715 358 aaPredicted RBP29.45■■■□□ 2.31
CHMP1A-203ENST00000547614 RTEL1-TNFRSF6BF6WH68 1400 aa29.44■■■□□ 2.3
CHMP1A-203ENST00000547614 A2MP01023 1474 aa29.42■■■□□ 2.3
CHMP1A-203ENST00000547614 KANK4Q5T7N3 995 aaPredicted RBP29.42■■■□□ 2.3
CHMP1A-203ENST00000547614 CNTLNQ9NXG0 1405 aa29.41■■■□□ 2.3
CHMP1A-203ENST00000547614 CAMSAP2Q08AD1 1489 aa29.4■■■□□ 2.3
CHMP1A-203ENST00000547614 PLXNC1O60486 1568 aa29.39■■■□□ 2.3
CHMP1A-203ENST00000547614 SETD1BQ9UPS6 1966 aaKnown RBP29.37■■■□□ 2.29
CHMP1A-203ENST00000547614 CCDC141Q6ZP82 1450 aa29.37■■■□□ 2.29
CHMP1A-203ENST00000547614 HSPA2P54652 639 aa29.37■■■□□ 2.29
CHMP1A-203ENST00000547614 ADGBQ8N7X0 1667 aa29.36■■■□□ 2.29
CHMP1A-203ENST00000547614 APLP2Q06481 763 aa29.35■■■□□ 2.29
CHMP1A-203ENST00000547614 PREX1Q8TCU6 1659 aa29.34■■■□□ 2.29
CHMP1A-203ENST00000547614 C3P01024 1663 aa29.33■■■□□ 2.29
CHMP1A-203ENST00000547614 PPP6R1Q9UPN7 881 aa29.32■■■□□ 2.28
CHMP1A-203ENST00000547614 ARHGEF5Q12774 1597 aa29.31■■■□□ 2.28
CHMP1A-203ENST00000547614 DHX29Q7Z478 1369 aaKnown RBP29.31■■■□□ 2.28
CHMP1A-203ENST00000547614 MIA2Q96PC5 1412 aa29.3■■■□□ 2.28
CHMP1A-203ENST00000547614 TSPY4P0CV99 314 aa29.3■■■□□ 2.28
CHMP1A-203ENST00000547614 TSPY10P0CW01 314 aa29.3■■■□□ 2.28
CHMP1A-203ENST00000547614 MYOM3Q5VTT5 1437 aa29.29■■■□□ 2.28
CHMP1A-203ENST00000547614 UHRF1BP1Q6BDS2 1440 aa29.29■■■□□ 2.28
CHMP1A-203ENST00000547614 GGT6Q6P531 493 aa29.28■■■□□ 2.28
CHMP1A-203ENST00000547614 MROH2AA6NES4 1674 aa29.28■■■□□ 2.28
CHMP1A-203ENST00000547614 ZMYM3Q14202 1370 aa29.27■■■□□ 2.28
CHMP1A-203ENST00000547614 NPATQ14207 1427 aa29.23■■■□□ 2.27
CHMP1A-203ENST00000547614 ILDR1Q86SU0 546 aaPredicted RBP29.22■■■□□ 2.27
CHMP1A-203ENST00000547614 CLTCQ00610 1675 aaKnown RBP29.18■■■□□ 2.26
CHMP1A-203ENST00000547614 KIF3BO15066 747 aa29.18■■■□□ 2.26
CHMP1A-203ENST00000547614 MAST1Q9Y2H9 1570 aa29.16■■■□□ 2.26
CHMP1A-203ENST00000547614 DMRT2Q9Y5R5 561 aa29.13■■■□□ 2.25
CHMP1A-203ENST00000547614 PTPRKQ15262 1439 aa29.11■■■□□ 2.25
CHMP1A-203ENST00000547614 FAM135AQ9P2D6 1515 aa29.1■■■□□ 2.25
CHMP1A-203ENST00000547614 STRCQ7RTU9 1775 aa29.08■■■□□ 2.25
CHMP1A-203ENST00000547614 PTPN23Q9H3S7 1636 aa29.06■■■□□ 2.24
CHMP1A-203ENST00000547614 FGD6Q6ZV73 1430 aa29.06■■■□□ 2.24
CHMP1A-203ENST00000547614 WASHC2CQ9Y4E1 1318 aa29.05■■■□□ 2.24
CHMP1A-203ENST00000547614 KDM5DQ9BY66 1539 aa29.04■■■□□ 2.24
CHMP1A-203ENST00000547614 FBXO41Q8TF61 875 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms