RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 SCAPERQ9BY12 1400 aa26.98■■□□□ 1.91
RBFOX1-207ENST00000547338 ARHGAP5Q13017 1502 aa26.97■■□□□ 1.91
RBFOX1-207ENST00000547338 CDC42BPAQ5VT25 1732 aa26.97■■□□□ 1.91
RBFOX1-207ENST00000547338 POGZQ7Z3K3 1410 aa26.97■■□□□ 1.91
RBFOX1-207ENST00000547338 EFCAB2Q5VUJ9 269 aa26.95■■□□□ 1.91
RBFOX1-207ENST00000547338 ARHGEF40Q8TER5 1519 aa26.95■■□□□ 1.9
RBFOX1-207ENST00000547338 VPS8Q8N3P4 1428 aa26.94■■□□□ 1.9
RBFOX1-207ENST00000547338 TRIM26Q12899 539 aaPredicted RBP26.93■■□□□ 1.9
RBFOX1-207ENST00000547338 GPATCH8Q9UKJ3 1502 aaKnown RBP26.9■■□□□ 1.9
RBFOX1-207ENST00000547338 YEATS2Q9ULM3 1422 aa26.9■■□□□ 1.9
RBFOX1-207ENST00000547338 PCGF6Q9BYE7 350 aa26.9■■□□□ 1.9
RBFOX1-207ENST00000547338 ARHGEF12Q9NZN5 1544 aa26.89■■□□□ 1.9
RBFOX1-207ENST00000547338 EHBP1L1Q8N3D4 1523 aa26.88■■□□□ 1.89
RBFOX1-207ENST00000547338 MTUS2Q5JR59 1369 aa26.88■■□□□ 1.89
RBFOX1-207ENST00000547338 ABCC1P33527 1531 aa26.88■■□□□ 1.89
RBFOX1-207ENST00000547338 SIGLEC1Q9BZZ2 1709 aa26.87■■□□□ 1.89
RBFOX1-207ENST00000547338 TIAM1Q13009 1591 aa26.86■■□□□ 1.89
RBFOX1-207ENST00000547338 KDM5CP41229 1560 aa26.86■■□□□ 1.89
RBFOX1-207ENST00000547338 ZFYVE16Q7Z3T8 1539 aa26.86■■□□□ 1.89
RBFOX1-207ENST00000547338 MAGI2Q86UL8 1455 aa26.85■■□□□ 1.89
RBFOX1-207ENST00000547338 SAMD9LQ8IVG5 1584 aa26.84■■□□□ 1.89
RBFOX1-207ENST00000547338 ITSN2Q9NZM3 1697 aa26.83■■□□□ 1.89
RBFOX1-207ENST00000547338 ZNF518AQ6AHZ1 1483 aa26.83■■□□□ 1.89
RBFOX1-207ENST00000547338 TRAPPC8Q9Y2L5 1435 aa26.81■■□□□ 1.88
RBFOX1-207ENST00000547338 AFAP1Q8N556 730 aa26.8■■□□□ 1.88
RBFOX1-207ENST00000547338 ADAMTSL3P82987 1691 aa26.8■■□□□ 1.88
RBFOX1-207ENST00000547338 CCNB3Q8WWL7 1395 aa26.78■■□□□ 1.88
RBFOX1-207ENST00000547338 BCORL1Q5H9F3 1711 aa26.78■■□□□ 1.88
RBFOX1-207ENST00000547338 HECW2Q9P2P5 1572 aa26.75■■□□□ 1.87
RBFOX1-207ENST00000547338 HRCP23327 699 aa26.75■■□□□ 1.87
RBFOX1-207ENST00000547338 SYCP2Q9BX26 1530 aa26.74■■□□□ 1.87
RBFOX1-207ENST00000547338 NCOA2Q15596 1464 aa26.74■■□□□ 1.87
RBFOX1-207ENST00000547338 LRRC9Q6ZRR7 1453 aa26.74■■□□□ 1.87
RBFOX1-207ENST00000547338 MAP3K1Q13233 1512 aa26.74■■□□□ 1.87
RBFOX1-207ENST00000547338 SUPT6HQ7KZ85 1726 aaKnown RBP26.72■■□□□ 1.87
RBFOX1-207ENST00000547338 MLH3Q9UHC1 1453 aa26.72■■□□□ 1.87
RBFOX1-207ENST00000547338 DIP2CQ9Y2E4 1556 aa26.71■■□□□ 1.87
RBFOX1-207ENST00000547338 ATP10AO60312 1499 aa26.71■■□□□ 1.87
RBFOX1-207ENST00000547338 ABCA6Q8N139 1617 aa26.71■■□□□ 1.87
RBFOX1-207ENST00000547338 CFDP1Q9UEE9 299 aaPredicted RBP26.7■■□□□ 1.87
RBFOX1-207ENST00000547338 ZNF777Q9ULD5 760 aaPredicted RBP26.7■■□□□ 1.87
RBFOX1-207ENST00000547338 KANK4Q5T7N3 995 aaPredicted RBP26.7■■□□□ 1.86
RBFOX1-207ENST00000547338 MADDQ8WXG6 1647 aa26.69■■□□□ 1.86
RBFOX1-207ENST00000547338 KIAA1107Q9UPP5 1409 aa26.68■■□□□ 1.86
RBFOX1-207ENST00000547338 KIDINS220Q9ULH0 1771 aa26.68■■□□□ 1.86
RBFOX1-207ENST00000547338 C9orf84Q5VXU9 1444 aa26.68■■□□□ 1.86
RBFOX1-207ENST00000547338 ARID4BQ4LE39 1312 aaPredicted RBP26.67■■□□□ 1.86
RBFOX1-207ENST00000547338 ZNF644Q9H582 1327 aaPredicted RBP26.67■■□□□ 1.86
RBFOX1-207ENST00000547338 HNRNPMP52272 730 aaKnown RBP eCLIP26.65■■□□□ 1.86
RBFOX1-207ENST00000547338 PLEKHH2Q8IVE3 1493 aa26.65■■□□□ 1.86
RBFOX1-207ENST00000547338 REREQ9P2R6 1566 aa26.63■■□□□ 1.85
RBFOX1-207ENST00000547338 PTPRMP28827 1452 aa26.63■■□□□ 1.85
RBFOX1-207ENST00000547338 MBD5Q9P267 1494 aa26.63■■□□□ 1.85
RBFOX1-207ENST00000547338 INO80Q9ULG1 1556 aaPredicted RBP26.6■■□□□ 1.85
RBFOX1-207ENST00000547338 RIMS1Q86UR5 1692 aaKnown RBP26.58■■□□□ 1.85
RBFOX1-207ENST00000547338 CAMSAP2Q08AD1 1489 aa26.57■■□□□ 1.84
RBFOX1-207ENST00000547338 ATP7AQ04656 1500 aa26.56■■□□□ 1.84
RBFOX1-207ENST00000547338 AGLP35573 1532 aa26.53■■□□□ 1.84
RBFOX1-207ENST00000547338 SPAG9O60271 1321 aaKnown RBP26.53■■□□□ 1.84
RBFOX1-207ENST00000547338 MYT1LQ9UL68 1186 aa26.53■■□□□ 1.84
RBFOX1-207ENST00000547338 FER1L4A9Z1Z3 1794 aa26.52■■□□□ 1.84
RBFOX1-207ENST00000547338 MLECQ14165 292 aa26.52■■□□□ 1.84
RBFOX1-207ENST00000547338 MYOM3Q5VTT5 1437 aa26.49■■□□□ 1.83
RBFOX1-207ENST00000547338 PLXNC1O60486 1568 aa26.48■■□□□ 1.83
RBFOX1-207ENST00000547338 CCDC141Q6ZP82 1450 aa26.46■■□□□ 1.83
RBFOX1-207ENST00000547338 ARHGEF5Q12774 1597 aa26.46■■□□□ 1.83
RBFOX1-207ENST00000547338 RTEL1-TNFRSF6BF6WH68 1400 aa26.43■■□□□ 1.82
RBFOX1-207ENST00000547338 MIA2Q96PC5 1412 aa26.43■■□□□ 1.82
RBFOX1-207ENST00000547338 A2MP01023 1474 aa26.41■■□□□ 1.82
RBFOX1-207ENST00000547338 ADGBQ8N7X0 1667 aa26.4■■□□□ 1.82
RBFOX1-207ENST00000547338 APLP2Q06481 763 aa26.4■■□□□ 1.82
RBFOX1-207ENST00000547338 ZEB1P37275 1124 aaPredicted RBP26.35■■□□□ 1.81
RBFOX1-207ENST00000547338 LMTK3Q96Q04 1460 aa26.35■■□□□ 1.81
RBFOX1-207ENST00000547338 RSPH4AQ5TD94 716 aa26.34■■□□□ 1.81
RBFOX1-207ENST00000547338 PTPN23Q9H3S7 1636 aa26.33■■□□□ 1.81
RBFOX1-207ENST00000547338 MAST1Q9Y2H9 1570 aa26.33■■□□□ 1.81
RBFOX1-207ENST00000547338 FGD6Q6ZV73 1430 aa26.32■■□□□ 1.8
RBFOX1-207ENST00000547338 CEBPAP49715 358 aaPredicted RBP26.32■■□□□ 1.8
RBFOX1-207ENST00000547338 PLPPR3Q6T4P5 718 aa26.31■■□□□ 1.8
RBFOX1-207ENST00000547338 DHX29Q7Z478 1369 aaKnown RBP26.3■■□□□ 1.8
RBFOX1-207ENST00000547338 C3P01024 1663 aa26.3■■□□□ 1.8
RBFOX1-207ENST00000547338 TCOF1Q13428 1488 aaKnown RBP26.3■■□□□ 1.8
RBFOX1-207ENST00000547338 CROCC2H7BZ55 1655 aa26.26■■□□□ 1.79
RBFOX1-207ENST00000547338 ABCC5O15440 1437 aa26.25■■□□□ 1.79
RBFOX1-207ENST00000547338 CNTLNQ9NXG0 1405 aa26.24■■□□□ 1.79
RBFOX1-207ENST00000547338 MROH2AA6NES4 1674 aa26.24■■□□□ 1.79
RBFOX1-207ENST00000547338 TSPY4P0CV99 314 aa26.23■■□□□ 1.79
RBFOX1-207ENST00000547338 TSPY10P0CW01 314 aa26.23■■□□□ 1.79
RBFOX1-207ENST00000547338 CLTCQ00610 1675 aaKnown RBP26.22■■□□□ 1.79
RBFOX1-207ENST00000547338 DNMT1P26358 1616 aaKnown RBP26.22■■□□□ 1.79
RBFOX1-207ENST00000547338 SHANK2Q9UPX8 1470 aa26.21■■□□□ 1.79
RBFOX1-207ENST00000547338 PREX1Q8TCU6 1659 aa26.2■■□□□ 1.78
RBFOX1-207ENST00000547338 DAPK1P53355 1430 aa26.19■■□□□ 1.78
RBFOX1-207ENST00000547338 GGT6Q6P531 493 aa26.19■■□□□ 1.78
RBFOX1-207ENST00000547338 ZMYM3Q14202 1370 aa26.16■■□□□ 1.78
RBFOX1-207ENST00000547338 KIF3BO15066 747 aa26.15■■□□□ 1.78
RBFOX1-207ENST00000547338 HSPA2P54652 639 aa26.15■■□□□ 1.78
RBFOX1-207ENST00000547338 ESF1Q9H501 851 aaKnown RBP26.15■■□□□ 1.78
RBFOX1-207ENST00000547338 SETD1BQ9UPS6 1966 aaKnown RBP26.14■■□□□ 1.78
RBFOX1-207ENST00000547338 RNF17Q9BXT8 1623 aaKnown RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms