RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 POGZQ7Z3K3 1410 aa26.08■■□□□ 1.77
CDK4-204ENST00000547281 YEATS2Q9ULM3 1422 aa26.08■■□□□ 1.77
CDK4-204ENST00000547281 PTPRMP28827 1452 aa26.08■■□□□ 1.77
CDK4-204ENST00000547281 MYO5CQ9NQX4 1742 aa26.08■■□□□ 1.76
CDK4-204ENST00000547281 ZFYVE16Q7Z3T8 1539 aa26.07■■□□□ 1.76
CDK4-204ENST00000547281 ADAMTSL3P82987 1691 aa26.06■■□□□ 1.76
CDK4-204ENST00000547281 ZMYM4Q5VZL5 1548 aa26.06■■□□□ 1.76
CDK4-204ENST00000547281 MLECQ14165 292 aa26.06■■□□□ 1.76
CDK4-204ENST00000547281 AFAP1Q8N556 730 aa26.06■■□□□ 1.76
CDK4-204ENST00000547281 LRRIQ1Q96JM4 1722 aa26.05■■□□□ 1.76
CDK4-204ENST00000547281 BCORL1Q5H9F3 1711 aa26.04■■□□□ 1.76
CDK4-204ENST00000547281 FYCO1Q9BQS8 1478 aa26.04■■□□□ 1.76
CDK4-204ENST00000547281 PLPPR3Q6T4P5 718 aa26.03■■□□□ 1.76
CDK4-204ENST00000547281 MADDQ8WXG6 1647 aa25.99■■□□□ 1.75
CDK4-204ENST00000547281 ATP10AO60312 1499 aa25.98■■□□□ 1.75
CDK4-204ENST00000547281 ZNF518AQ6AHZ1 1483 aa25.98■■□□□ 1.75
CDK4-204ENST00000547281 ZNF777Q9ULD5 760 aaPredicted RBP25.97■■□□□ 1.75
CDK4-204ENST00000547281 C9orf84Q5VXU9 1444 aa25.92■■□□□ 1.74
CDK4-204ENST00000547281 CDC42BPBQ9Y5S2 1711 aa25.91■■□□□ 1.74
CDK4-204ENST00000547281 RIMS1Q86UR5 1692 aaKnown RBP25.9■■□□□ 1.74
CDK4-204ENST00000547281 MTUS2Q5JR59 1369 aa25.89■■□□□ 1.74
CDK4-204ENST00000547281 CEP162Q5TB80 1403 aa25.88■■□□□ 1.73
CDK4-204ENST00000547281 PREX2Q70Z35 1606 aa25.88■■□□□ 1.73
CDK4-204ENST00000547281 TRAPPC8Q9Y2L5 1435 aa25.88■■□□□ 1.73
CDK4-204ENST00000547281 CFDP1Q9UEE9 299 aaPredicted RBP25.87■■□□□ 1.73
CDK4-204ENST00000547281 SIGLEC1Q9BZZ2 1709 aa25.85■■□□□ 1.73
CDK4-204ENST00000547281 CCNB3Q8WWL7 1395 aa25.85■■□□□ 1.73
CDK4-204ENST00000547281 ARHGEF12Q9NZN5 1544 aa25.85■■□□□ 1.73
CDK4-204ENST00000547281 LOC105371045A0A1W2PR82 267 aa25.85■■□□□ 1.73
CDK4-204ENST00000547281 KDM5CP41229 1560 aa25.85■■□□□ 1.73
CDK4-204ENST00000547281 HNRNPMP52272 730 aaKnown RBP eCLIP25.84■■□□□ 1.73
CDK4-204ENST00000547281 GPATCH8Q9UKJ3 1502 aaKnown RBP25.83■■□□□ 1.73
CDK4-204ENST00000547281 ILDR1Q86SU0 546 aaPredicted RBP25.83■■□□□ 1.73
CDK4-204ENST00000547281 MLH3Q9UHC1 1453 aa25.83■■□□□ 1.73
CDK4-204ENST00000547281 ABCC1P33527 1531 aa25.82■■□□□ 1.72
CDK4-204ENST00000547281 CDC42BPAQ5VT25 1732 aa25.81■■□□□ 1.72
CDK4-204ENST00000547281 ESF1Q9H501 851 aaKnown RBP25.8■■□□□ 1.72
CDK4-204ENST00000547281 CEBPAP49715 358 aaPredicted RBP25.79■■□□□ 1.72
CDK4-204ENST00000547281 HSPA2P54652 639 aa25.78■■□□□ 1.72
CDK4-204ENST00000547281 SPAG9O60271 1321 aaKnown RBP25.78■■□□□ 1.72
CDK4-204ENST00000547281 LMTK3Q96Q04 1460 aa25.76■■□□□ 1.71
CDK4-204ENST00000547281 DIP2CQ9Y2E4 1556 aa25.76■■□□□ 1.71
CDK4-204ENST00000547281 FER1L4A9Z1Z3 1794 aa25.75■■□□□ 1.71
CDK4-204ENST00000547281 ITSN2Q9NZM3 1697 aa25.75■■□□□ 1.71
CDK4-204ENST00000547281 SAMD9LQ8IVG5 1584 aa25.72■■□□□ 1.71
CDK4-204ENST00000547281 PLEKHH2Q8IVE3 1493 aa25.72■■□□□ 1.71
CDK4-204ENST00000547281 KIAA1107Q9UPP5 1409 aa25.71■■□□□ 1.71
CDK4-204ENST00000547281 ABCA6Q8N139 1617 aa25.71■■□□□ 1.71
CDK4-204ENST00000547281 SYCP2Q9BX26 1530 aa25.71■■□□□ 1.71
CDK4-204ENST00000547281 ZNF644Q9H582 1327 aaPredicted RBP25.69■■□□□ 1.7
CDK4-204ENST00000547281 REREQ9P2R6 1566 aa25.69■■□□□ 1.7
CDK4-204ENST00000547281 EHBP1L1Q8N3D4 1523 aa25.67■■□□□ 1.7
CDK4-204ENST00000547281 KIDINS220Q9ULH0 1771 aa25.67■■□□□ 1.7
CDK4-204ENST00000547281 AGLP35573 1532 aa25.66■■□□□ 1.7
CDK4-204ENST00000547281 TIAM1Q13009 1591 aa25.61■■□□□ 1.69
CDK4-204ENST00000547281 VPS8Q8N3P4 1428 aa25.59■■□□□ 1.69
CDK4-204ENST00000547281 ATP7AQ04656 1500 aa25.58■■□□□ 1.69
CDK4-204ENST00000547281 GGT6Q6P531 493 aa25.57■■□□□ 1.68
CDK4-204ENST00000547281 NCOA2Q15596 1464 aa25.57■■□□□ 1.68
CDK4-204ENST00000547281 UHRF1BP1Q6BDS2 1440 aa25.56■■□□□ 1.68
CDK4-204ENST00000547281 CNTLNQ9NXG0 1405 aa25.56■■□□□ 1.68
CDK4-204ENST00000547281 A2MP01023 1474 aa25.55■■□□□ 1.68
CDK4-204ENST00000547281 RSPH4AQ5TD94 716 aa25.54■■□□□ 1.68
CDK4-204ENST00000547281 MBD5Q9P267 1494 aa25.53■■□□□ 1.68
CDK4-204ENST00000547281 FBXO41Q8TF61 875 aa25.53■■□□□ 1.68
CDK4-204ENST00000547281 SUPT6HQ7KZ85 1726 aaKnown RBP25.52■■□□□ 1.68
CDK4-204ENST00000547281 PREX1Q8TCU6 1659 aa25.52■■□□□ 1.68
CDK4-204ENST00000547281 SETD1BQ9UPS6 1966 aaKnown RBP25.51■■□□□ 1.67
CDK4-204ENST00000547281 ZMYM3Q14202 1370 aa25.5■■□□□ 1.67
CDK4-204ENST00000547281 INO80Q9ULG1 1556 aaPredicted RBP25.5■■□□□ 1.67
CDK4-204ENST00000547281 DMRT2Q9Y5R5 561 aa25.5■■□□□ 1.67
CDK4-204ENST00000547281 TSPY4P0CV99 314 aa25.49■■□□□ 1.67
CDK4-204ENST00000547281 TSPY10P0CW01 314 aa25.49■■□□□ 1.67
CDK4-204ENST00000547281 KANK4Q5T7N3 995 aaPredicted RBP25.49■■□□□ 1.67
CDK4-204ENST00000547281 LRRC9Q6ZRR7 1453 aa25.48■■□□□ 1.67
CDK4-204ENST00000547281 RTEL1-TNFRSF6BF6WH68 1400 aa25.48■■□□□ 1.67
CDK4-204ENST00000547281 APLP2Q06481 763 aa25.48■■□□□ 1.67
CDK4-204ENST00000547281 C3P01024 1663 aa25.48■■□□□ 1.67
CDK4-204ENST00000547281 PPP6R1Q9UPN7 881 aa25.47■■□□□ 1.67
CDK4-204ENST00000547281 CAMSAP2Q08AD1 1489 aa25.46■■□□□ 1.67
CDK4-204ENST00000547281 DHX29Q7Z478 1369 aaKnown RBP25.44■■□□□ 1.66
CDK4-204ENST00000547281 CCDC141Q6ZP82 1450 aa25.44■■□□□ 1.66
CDK4-204ENST00000547281 KIF3BO15066 747 aa25.43■■□□□ 1.66
CDK4-204ENST00000547281 PLXNC1O60486 1568 aa25.43■■□□□ 1.66
CDK4-204ENST00000547281 ADGBQ8N7X0 1667 aa25.4■■□□□ 1.66
CDK4-204ENST00000547281 NPATQ14207 1427 aa25.39■■□□□ 1.66
CDK4-204ENST00000547281 MAP3K1Q13233 1512 aa25.39■■□□□ 1.66
CDK4-204ENST00000547281 CERKQ8TCT0 537 aa25.39■■□□□ 1.66
CDK4-204ENST00000547281 MROH2AA6NES4 1674 aa25.36■■□□□ 1.65
CDK4-204ENST00000547281 CLTCQ00610 1675 aaKnown RBP25.36■■□□□ 1.65
CDK4-204ENST00000547281 WASHC2CQ9Y4E1 1318 aa25.33■■□□□ 1.64
CDK4-204ENST00000547281 MYOM3Q5VTT5 1437 aa25.32■■□□□ 1.64
CDK4-204ENST00000547281 ARHGEF5Q12774 1597 aa25.31■■□□□ 1.64
CDK4-204ENST00000547281 STRCQ7RTU9 1775 aa25.31■■□□□ 1.64
CDK4-204ENST00000547281 PTPRKQ15262 1439 aa25.31■■□□□ 1.64
CDK4-204ENST00000547281 MIA2Q96PC5 1412 aa25.3■■□□□ 1.64
CDK4-204ENST00000547281 PTPRTO14522 1441 aa25.28■■□□□ 1.64
CDK4-204ENST00000547281 FBXO31Q5XUX0 539 aaPredicted RBP25.26■■□□□ 1.63
CDK4-204ENST00000547281 NCKAP5LQ9HCH0 1330 aa25.26■■□□□ 1.63
CDK4-204ENST00000547281 NCOA1Q15788 1441 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms