RNA–Protein interactions for RNA: ENST00000546814.1

LETMD1-204, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-204ENST00000546814 EEA1Q15075 1411 aa11.5□□□□□ -0.57
LETMD1-204ENST00000546814 FANCAO15360 1455 aa11.5□□□□□ -0.57
LETMD1-204ENST00000546814 PLEKHD1A6NEE1 506 aa11.49□□□□□ -0.57
LETMD1-204ENST00000546814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.49□□□□□ -0.57
LETMD1-204ENST00000546814 EFCAB5A4FU69 1503 aa11.48□□□□□ -0.57
LETMD1-204ENST00000546814 P3H3Q8IVL6 736 aa11.47□□□□□ -0.57
LETMD1-204ENST00000546814 TTC37Q6PGP7 1564 aa11.46□□□□□ -0.57
LETMD1-204ENST00000546814 ARID4BQ4LE39 1312 aaPredicted RBP11.46□□□□□ -0.57
LETMD1-204ENST00000546814 ZFYVE16Q7Z3T8 1539 aa11.45□□□□□ -0.58
LETMD1-204ENST00000546814 PLCH2O75038 1416 aa11.45□□□□□ -0.58
LETMD1-204ENST00000546814 ARHGEF12Q9NZN5 1544 aa11.45□□□□□ -0.58
LETMD1-204ENST00000546814 YEATS2Q9ULM3 1422 aa11.44□□□□□ -0.58
LETMD1-204ENST00000546814 RIMS1Q86UR5 1692 aaKnown RBP11.44□□□□□ -0.58
LETMD1-204ENST00000546814 ARID3CA6NKF2 412 aa11.44□□□□□ -0.58
LETMD1-204ENST00000546814 SIGLEC1Q9BZZ2 1709 aa11.43□□□□□ -0.58
LETMD1-204ENST00000546814 CERKQ8TCT0 537 aa11.42□□□□□ -0.58
LETMD1-204ENST00000546814 ATP10AO60312 1499 aa11.42□□□□□ -0.58
LETMD1-204ENST00000546814 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
LETMD1-204ENST00000546814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.41□□□□□ -0.58
LETMD1-204ENST00000546814 HNRNPUL2Q1KMD3 747 aaKnown RBP11.41□□□□□ -0.58
LETMD1-204ENST00000546814 HSPA2P54652 639 aa11.4□□□□□ -0.58
LETMD1-204ENST00000546814 C9orf84Q5VXU9 1444 aa11.4□□□□□ -0.58
LETMD1-204ENST00000546814 SCAPERQ9BY12 1400 aa11.4□□□□□ -0.58
LETMD1-204ENST00000546814 REREQ9P2R6 1566 aa11.4□□□□□ -0.58
LETMD1-204ENST00000546814 KDM5CP41229 1560 aa11.38□□□□□ -0.59
LETMD1-204ENST00000546814 ZNF518AQ6AHZ1 1483 aa11.38□□□□□ -0.59
LETMD1-204ENST00000546814 C1QBPQ07021 282 aaKnown RBP11.37□□□□□ -0.59
LETMD1-204ENST00000546814 EFCAB2Q5VUJ9 269 aa11.37□□□□□ -0.59
LETMD1-204ENST00000546814 PREX1Q8TCU6 1659 aa11.36□□□□□ -0.59
LETMD1-204ENST00000546814 FER1L4A9Z1Z3 1794 aa11.36□□□□□ -0.59
LETMD1-204ENST00000546814 SETD1BQ9UPS6 1966 aaKnown RBP11.36□□□□□ -0.59
LETMD1-204ENST00000546814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.36□□□□□ -0.593e-14■□□□□ 10.9
LETMD1-204ENST00000546814 FMN1Q68DA7 1419 aa11.35□□□□□ -0.59
LETMD1-204ENST00000546814 PTPRTO14522 1441 aa11.35□□□□□ -0.59
LETMD1-204ENST00000546814 MLH3Q9UHC1 1453 aa11.34□□□□□ -0.59
LETMD1-204ENST00000546814 CACNB1Q02641 598 aaPredicted RBP11.34□□□□□ -0.59
LETMD1-204ENST00000546814 CDK11AQ9UQ88 783 aaPredicted RBP11.34□□□□□ -0.59
LETMD1-204ENST00000546814 AGLP35573 1532 aa11.34□□□□□ -0.59
LETMD1-204ENST00000546814 CDK13Q14004 1512 aaKnown RBP11.34□□□□□ -0.59
LETMD1-204ENST00000546814 IQSEC2Q5JU85 1478 aa11.33□□□□□ -0.6
LETMD1-204ENST00000546814 STRCQ7RTU9 1775 aa11.33□□□□□ -0.6
LETMD1-204ENST00000546814 TROQ12816 1431 aaPredicted RBP11.32□□□□□ -0.6
LETMD1-204ENST00000546814 UHRF1BP1Q6BDS2 1440 aa11.31□□□□□ -0.6
LETMD1-204ENST00000546814 MYO5CQ9NQX4 1742 aa11.31□□□□□ -0.6
LETMD1-204ENST00000546814 SLC4A2P04920 1241 aa11.3□□□□□ -0.6
LETMD1-204ENST00000546814 DIP2CQ9Y2E4 1556 aa11.29□□□□□ -0.6
LETMD1-204ENST00000546814 ARHGAP35Q9NRY4 1499 aa11.29□□□□□ -0.6
LETMD1-204ENST00000546814 KIF14Q15058 1648 aa11.28□□□□□ -0.6
LETMD1-204ENST00000546814 TRAPPC8Q9Y2L5 1435 aa11.28□□□□□ -0.6
LETMD1-204ENST00000546814 SOCS7O14512 581 aa11.28□□□□□ -0.6
LETMD1-204ENST00000546814 MLECQ14165 292 aa11.28□□□□□ -0.6
LETMD1-204ENST00000546814 AFAP1Q8N556 730 aa11.28□□□□□ -0.6
LETMD1-204ENST00000546814 LTBP4Q8N2S1 1624 aa11.27□□□□□ -0.6
LETMD1-204ENST00000546814 CNTLNQ9NXG0 1405 aa11.27□□□□□ -0.6
LETMD1-204ENST00000546814 CEBPAP49715 358 aaPredicted RBP11.27□□□□□ -0.61
LETMD1-204ENST00000546814 CLIP1P30622 1438 aa11.26□□□□□ -0.61
LETMD1-204ENST00000546814 NPATQ14207 1427 aa11.26□□□□□ -0.61
LETMD1-204ENST00000546814 U3KPZ7 1027 aaPredicted RBP11.25□□□□□ -0.61
LETMD1-204ENST00000546814 NCOA1Q15788 1441 aa11.25□□□□□ -0.61
LETMD1-204ENST00000546814 ABCC1P33527 1531 aa11.25□□□□□ -0.61
LETMD1-204ENST00000546814 ARHGAP5Q13017 1502 aa11.25□□□□□ -0.61
LETMD1-204ENST00000546814 ABCA6Q8N139 1617 aa11.24□□□□□ -0.61
LETMD1-204ENST00000546814 ILDR2Q71H61 639 aa11.24□□□□□ -0.61
LETMD1-204ENST00000546814 C3P01024 1663 aa11.24□□□□□ -0.61
LETMD1-204ENST00000546814 CDC42BPBQ9Y5S2 1711 aa11.23□□□□□ -0.61
LETMD1-204ENST00000546814 RANGAP1P46060 587 aaPredicted RBP11.22□□□□□ -0.61
LETMD1-204ENST00000546814 CCDC18Q5T9S5 1454 aa11.22□□□□□ -0.61
LETMD1-204ENST00000546814 PREX2Q70Z35 1606 aa11.22□□□□□ -0.61
LETMD1-204ENST00000546814 CASKIN1Q8WXD9 1431 aa11.22□□□□□ -0.61
LETMD1-204ENST00000546814 DISP3Q9P2K9 1392 aa11.22□□□□□ -0.61
LETMD1-204ENST00000546814 MROH2AA6NES4 1674 aa11.21□□□□□ -0.61
LETMD1-204ENST00000546814 KIDINS220Q9ULH0 1771 aa11.21□□□□□ -0.62
LETMD1-204ENST00000546814 PLA2R1Q13018 1463 aa11.2□□□□□ -0.62
LETMD1-204ENST00000546814 KIAA1107Q9UPP5 1409 aa11.19□□□□□ -0.62
LETMD1-204ENST00000546814 LRRIQ1Q96JM4 1722 aa11.18□□□□□ -0.62
LETMD1-204ENST00000546814 ITSN2Q9NZM3 1697 aa11.18□□□□□ -0.62
LETMD1-204ENST00000546814 ZMYM3Q14202 1370 aa11.17□□□□□ -0.62
LETMD1-204ENST00000546814 PLXNC1O60486 1568 aa11.17□□□□□ -0.62
LETMD1-204ENST00000546814 SAMD9LQ8IVG5 1584 aa11.17□□□□□ -0.62
LETMD1-204ENST00000546814 TCOF1Q13428 1488 aaKnown RBP11.17□□□□□ -0.62
LETMD1-204ENST00000546814 SPATA31D1Q6ZQQ2 1576 aa11.16□□□□□ -0.62
LETMD1-204ENST00000546814 UBTFP17480 764 aaKnown RBP11.16□□□□□ -0.62
LETMD1-204ENST00000546814 PKD2Q13563 968 aa11.16□□□□□ -0.62
LETMD1-204ENST00000546814 ESF1Q9H501 851 aaKnown RBP11.16□□□□□ -0.62
LETMD1-204ENST00000546814 ZNF142P52746 1687 aaPredicted RBP11.15□□□□□ -0.62
LETMD1-204ENST00000546814 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
LETMD1-204ENST00000546814 CAMSAP1Q5T5Y3 1602 aa11.15□□□□□ -0.62
LETMD1-204ENST00000546814 CDC42BPAQ5VT25 1732 aa11.15□□□□□ -0.63
LETMD1-204ENST00000546814 GPATCH8Q9UKJ3 1502 aaKnown RBP11.14□□□□□ -0.63
LETMD1-204ENST00000546814 PLEKHH2Q8IVE3 1493 aa11.14□□□□□ -0.63
LETMD1-204ENST00000546814 FYCO1Q9BQS8 1478 aa11.14□□□□□ -0.63
LETMD1-204ENST00000546814 PTPRKQ15262 1439 aa11.14□□□□□ -0.63
LETMD1-204ENST00000546814 ATP1B4Q9UN42 357 aaPredicted RBP11.13□□□□□ -0.63
LETMD1-204ENST00000546814 INO80Q9ULG1 1556 aaPredicted RBP11.12□□□□□ -0.63
LETMD1-204ENST00000546814 SPAG9O60271 1321 aaKnown RBP11.11□□□□□ -0.63
LETMD1-204ENST00000546814 ATP7AQ04656 1500 aa11.11□□□□□ -0.63
LETMD1-204ENST00000546814 FAM135AQ9P2D6 1515 aa11.11□□□□□ -0.63
LETMD1-204ENST00000546814 RTEL1-TNFRSF6BF6WH68 1400 aa11.1□□□□□ -0.63
LETMD1-204ENST00000546814 A2MP01023 1474 aa11.1□□□□□ -0.63
LETMD1-204ENST00000546814 CEP170BQ9Y4F5 1589 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms