RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 POGZQ7Z3K3 1410 aa36.84■■■■□ 3.49
CHD4-214ENST00000545942 MAGI2Q86UL8 1455 aa36.83■■■■□ 3.49
CHD4-214ENST00000545942 ADAMTSL3P82987 1691 aa36.82■■■■□ 3.49
CHD4-214ENST00000545942 ZFYVE16Q7Z3T8 1539 aa36.8■■■■□ 3.48
CHD4-214ENST00000545942 ARHGAP5Q13017 1502 aa36.79■■■■□ 3.48
CHD4-214ENST00000545942 YEATS2Q9ULM3 1422 aa36.78■■■■□ 3.48
CHD4-214ENST00000545942 BCORL1Q5H9F3 1711 aa36.77■■■■□ 3.48
CHD4-214ENST00000545942 HECW2Q9P2P5 1572 aa36.77■■■■□ 3.48
CHD4-214ENST00000545942 PTPRMP28827 1452 aa36.75■■■■□ 3.47
CHD4-214ENST00000545942 ZNF518AQ6AHZ1 1483 aa36.68■■■■□ 3.46
CHD4-214ENST00000545942 MADDQ8WXG6 1647 aa36.67■■■■□ 3.46
CHD4-214ENST00000545942 PREX2Q70Z35 1606 aa36.64■■■■□ 3.46
CHD4-214ENST00000545942 CDC42BPBQ9Y5S2 1711 aa36.64■■■■□ 3.46
CHD4-214ENST00000545942 ATP10AO60312 1499 aa36.62■■■■□ 3.45
CHD4-214ENST00000545942 AFAP1Q8N556 730 aa36.61■■■■□ 3.45
CHD4-214ENST00000545942 KDM5CP41229 1560 aa36.6■■■■□ 3.45
CHD4-214ENST00000545942 SIGLEC1Q9BZZ2 1709 aa36.59■■■■□ 3.45
CHD4-214ENST00000545942 CEP162Q5TB80 1403 aa36.58■■■■□ 3.45
CHD4-214ENST00000545942 C9orf84Q5VXU9 1444 aa36.58■■■■□ 3.45
CHD4-214ENST00000545942 ABCC1P33527 1531 aa36.54■■■■□ 3.44
CHD4-214ENST00000545942 RIMS1Q86UR5 1692 aaKnown RBP36.53■■■■□ 3.44
CHD4-214ENST00000545942 MLECQ14165 292 aa36.52■■■■□ 3.44
CHD4-214ENST00000545942 MYT1LQ9UL68 1186 aa36.52■■■■□ 3.44
CHD4-214ENST00000545942 CDC42BPAQ5VT25 1732 aa36.52■■■■□ 3.44
CHD4-214ENST00000545942 ARHGEF12Q9NZN5 1544 aa36.5■■■■□ 3.43
CHD4-214ENST00000545942 TRAPPC8Q9Y2L5 1435 aa36.5■■■■□ 3.43
CHD4-214ENST00000545942 MTUS2Q5JR59 1369 aa36.49■■■■□ 3.43
CHD4-214ENST00000545942 MLH3Q9UHC1 1453 aa36.48■■■■□ 3.43
CHD4-214ENST00000545942 GPATCH8Q9UKJ3 1502 aaKnown RBP36.48■■■■□ 3.43
CHD4-214ENST00000545942 ITSN2Q9NZM3 1697 aa36.45■■■■□ 3.43
CHD4-214ENST00000545942 ZNF777Q9ULD5 760 aaPredicted RBP36.44■■■■□ 3.42
CHD4-214ENST00000545942 DIP2CQ9Y2E4 1556 aa36.42■■■■□ 3.42
CHD4-214ENST00000545942 CCNB3Q8WWL7 1395 aa36.41■■■■□ 3.42
CHD4-214ENST00000545942 CFDP1Q9UEE9 299 aaPredicted RBP36.38■■■■□ 3.41
CHD4-214ENST00000545942 SAMD9LQ8IVG5 1584 aa36.38■■■■□ 3.41
CHD4-214ENST00000545942 REREQ9P2R6 1566 aa36.38■■■■□ 3.41
CHD4-214ENST00000545942 FER1L4A9Z1Z3 1794 aa36.38■■■■□ 3.41
CHD4-214ENST00000545942 PLPPR3Q6T4P5 718 aa36.37■■■■□ 3.41
CHD4-214ENST00000545942 ABCA6Q8N139 1617 aa36.36■■■■□ 3.41
CHD4-214ENST00000545942 LMTK3Q96Q04 1460 aa36.35■■■■□ 3.41
CHD4-214ENST00000545942 EHBP1L1Q8N3D4 1523 aa36.35■■■■□ 3.41
CHD4-214ENST00000545942 LOC105371045A0A1W2PR82 267 aa36.34■■■■□ 3.41
CHD4-214ENST00000545942 SYCP2Q9BX26 1530 aa36.33■■■■□ 3.41
CHD4-214ENST00000545942 PLEKHH2Q8IVE3 1493 aa36.32■■■■□ 3.4
CHD4-214ENST00000545942 KIAA1107Q9UPP5 1409 aa36.32■■■■□ 3.4
CHD4-214ENST00000545942 HNRNPMP52272 730 aaKnown RBP eCLIP36.31■■■■□ 3.43e-7■■■■■ 27.3
CHD4-214ENST00000545942 KIDINS220Q9ULH0 1771 aa36.28■■■■□ 3.4
CHD4-214ENST00000545942 AGLP35573 1532 aa36.27■■■■□ 3.4
CHD4-214ENST00000545942 SPAG9O60271 1321 aaKnown RBP36.26■■■■□ 3.4
CHD4-214ENST00000545942 TIAM1Q13009 1591 aa36.25■■■■□ 3.39
CHD4-214ENST00000545942 VPS8Q8N3P4 1428 aa36.2■■■■□ 3.38
CHD4-214ENST00000545942 CEBPAP49715 358 aaPredicted RBP36.18■■■■□ 3.38
CHD4-214ENST00000545942 HSPA2P54652 639 aa36.16■■■■□ 3.38
CHD4-214ENST00000545942 ILDR1Q86SU0 546 aaPredicted RBP36.16■■■■□ 3.38
CHD4-214ENST00000545942 ZNF644Q9H582 1327 aaPredicted RBP36.16■■■■□ 3.38
CHD4-214ENST00000545942 ATP7AQ04656 1500 aa36.15■■■■□ 3.38
CHD4-214ENST00000545942 ESF1Q9H501 851 aaKnown RBP36.14■■■■□ 3.38
CHD4-214ENST00000545942 NCOA2Q15596 1464 aa36.12■■■■□ 3.37
CHD4-214ENST00000545942 INO80Q9ULG1 1556 aaPredicted RBP36.12■■■■□ 3.37
CHD4-214ENST00000545942 SUPT6HQ7KZ85 1726 aaKnown RBP36.1■■■■□ 3.37
CHD4-214ENST00000545942 MBD5Q9P267 1494 aa36.09■■■■□ 3.37
CHD4-214ENST00000545942 CNTLNQ9NXG0 1405 aa36.05■■■■□ 3.36
CHD4-214ENST00000545942 A2MP01023 1474 aa36.04■■■■□ 3.36
CHD4-214ENST00000545942 PREX1Q8TCU6 1659 aa36.04■■■■□ 3.36
CHD4-214ENST00000545942 LRRC9Q6ZRR7 1453 aa36.02■■■■□ 3.36
CHD4-214ENST00000545942 PLXNC1O60486 1568 aa36.02■■■■□ 3.36
CHD4-214ENST00000545942 UHRF1BP1Q6BDS2 1440 aa36■■■■□ 3.35
CHD4-214ENST00000545942 RTEL1-TNFRSF6BF6WH68 1400 aa35.99■■■■□ 3.35
CHD4-214ENST00000545942 C3P01024 1663 aa35.99■■■■□ 3.35
CHD4-214ENST00000545942 CAMSAP2Q08AD1 1489 aa35.97■■■■□ 3.35
CHD4-214ENST00000545942 MAP3K1Q13233 1512 aa35.97■■■■□ 3.35
CHD4-214ENST00000545942 RSPH4AQ5TD94 716 aa35.95■■■■□ 3.35
CHD4-214ENST00000545942 CCDC141Q6ZP82 1450 aa35.94■■■■□ 3.34
CHD4-214ENST00000545942 ADGBQ8N7X0 1667 aa35.93■■■■□ 3.34
CHD4-214ENST00000545942 SETD1BQ9UPS6 1966 aaKnown RBP35.92■■■■□ 3.34
CHD4-214ENST00000545942 KANK4Q5T7N3 995 aaPredicted RBP35.9■■■■□ 3.34
CHD4-214ENST00000545942 GGT6Q6P531 493 aa35.89■■■■□ 3.34
CHD4-214ENST00000545942 ZMYM3Q14202 1370 aa35.89■■■■□ 3.34
CHD4-214ENST00000545942 MROH2AA6NES4 1674 aa35.88■■■■□ 3.33
CHD4-214ENST00000545942 DHX29Q7Z478 1369 aaKnown RBP35.86■■■■□ 3.33
CHD4-214ENST00000545942 PPP6R1Q9UPN7 881 aa35.85■■■■□ 3.33
CHD4-214ENST00000545942 NPATQ14207 1427 aa35.84■■■■□ 3.33
CHD4-214ENST00000545942 ARHGEF5Q12774 1597 aa35.83■■■■□ 3.33
CHD4-214ENST00000545942 FBXO41Q8TF61 875 aa35.81■■■■□ 3.32
CHD4-214ENST00000545942 TSPY4P0CV99 314 aa35.8■■■■□ 3.32
CHD4-214ENST00000545942 TSPY10P0CW01 314 aa35.8■■■■□ 3.32
CHD4-214ENST00000545942 CLTCQ00610 1675 aaKnown RBP35.79■■■■□ 3.32
CHD4-214ENST00000545942 APLP2Q06481 763 aa35.78■■■■□ 3.32
CHD4-214ENST00000545942 MYOM3Q5VTT5 1437 aa35.77■■■■□ 3.32
CHD4-214ENST00000545942 DMRT2Q9Y5R5 561 aa35.77■■■■□ 3.32
CHD4-214ENST00000545942 MIA2Q96PC5 1412 aa35.76■■■■□ 3.32
CHD4-214ENST00000545942 KIF3BO15066 747 aa35.74■■■■□ 3.31
CHD4-214ENST00000545942 STRCQ7RTU9 1775 aa35.71■■■■□ 3.31
CHD4-214ENST00000545942 PTPRKQ15262 1439 aa35.7■■■■□ 3.3
CHD4-214ENST00000545942 MAST1Q9Y2H9 1570 aa35.65■■■■□ 3.3
CHD4-214ENST00000545942 NCOA1Q15788 1441 aa35.63■■■■□ 3.29
CHD4-214ENST00000545942 FAM135AQ9P2D6 1515 aa35.62■■■■□ 3.29
CHD4-214ENST00000545942 PTPRTO14522 1441 aa35.62■■■■□ 3.29
CHD4-214ENST00000545942 CERKQ8TCT0 537 aa35.61■■■■□ 3.29
CHD4-214ENST00000545942 KDM5DQ9BY66 1539 aa35.6■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms