RNA–Protein interactions for RNA: ENST00000544361.1

QKI-213, Transcript of QKI, KH domain containing RNA binding, human

TSL 5

Gene QKI, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
QKI-213	ENST00000544361	TMC2	Q8TDI7	906 aa		11.25	□□□□□ -0.61
QKI-213	ENST00000544361	POTEM	A6NI47	508 aa		11.23	□□□□□ -0.61
QKI-213	ENST00000544361	KIF3C	O14782	793 aa		11.23	□□□□□ -0.61
QKI-213	ENST00000544361	HOXB3	P14651	431 aa	Predicted RBP	11.23	□□□□□ -0.61
QKI-213	ENST00000544361	POTEG	Q6S5H5	508 aa		11.23	□□□□□ -0.61
QKI-213	ENST00000544361	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.23	□□□□□ -0.61
QKI-213	ENST00000544361	DOK7	Q18PE1	504 aa		11.22	□□□□□ -0.61
QKI-213	ENST00000544361	ZNF710	Q8N1W2	664 aa		11.21	□□□□□ -0.61
QKI-213	ENST00000544361	RIMBP2	O15034	1052 aa		11.19	□□□□□ -0.62
QKI-213	ENST00000544361	SPRYD3	Q8NCJ5	442 aa		11.17	□□□□□ -0.62
QKI-213	ENST00000544361	MARVELD3	Q96A59	401 aa		11.16	□□□□□ -0.62
QKI-213	ENST00000544361	GPHN	Q9NQX3	736 aa	Predicted RBP	11.16	□□□□□ -0.62
QKI-213	ENST00000544361	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.14	□□□□□ -0.63
QKI-213	ENST00000544361	EMP3	P54852	163 aa		11.13	□□□□□ -0.63
QKI-213	ENST00000544361	CFAP44	Q96MT7	982 aa		11.13	□□□□□ -0.63
QKI-213	ENST00000544361	FOXK1	P85037	733 aa		11.12	□□□□□ -0.63
QKI-213	ENST00000544361	DSG2	Q14126	1118 aa		11.12	□□□□□ -0.63
QKI-213	ENST00000544361	CRISPLD2	Q9H0B8	497 aa		11.12	□□□□□ -0.63
QKI-213	ENST00000544361	ZSWIM6	Q9HCJ5	1215 aa		11.12	□□□□□ -0.63
QKI-213	ENST00000544361	NCKAP5L	Q9HCH0	1330 aa		11.1	□□□□□ -0.63
QKI-213	ENST00000544361	HOXB1	P14653	301 aa	Predicted RBP	11.1	□□□□□ -0.63
QKI-213	ENST00000544361	PLPP6	Q8IY26	295 aa		11.09	□□□□□ -0.63
QKI-213	ENST00000544361	PDE4A	P27815	886 aa		11.08	□□□□□ -0.64
QKI-213	ENST00000544361	CADPS2	Q86UW7	1296 aa		11.08	□□□□□ -0.64
QKI-213	ENST00000544361	GPR153	Q6NV75	609 aa		11.07	□□□□□ -0.64
QKI-213	ENST00000544361	SLC34A2	O95436	690 aa		11.06	□□□□□ -0.64
QKI-213	ENST00000544361	ARSI	Q5FYB1	569 aa		11.06	□□□□□ -0.64
QKI-213	ENST00000544361	PPP1R15B	Q5SWA1	713 aa		11.06	□□□□□ -0.64
QKI-213	ENST00000544361	LARP6	Q9BRS8	491 aa	Known RBP	11.06	□□□□□ -0.64
QKI-213	ENST00000544361	FAM205C	A6NFA0	338 aa		11.04	□□□□□ -0.64
QKI-213	ENST00000544361	DDX27	Q96GQ7	796 aa	Known RBP	11.04	□□□□□ -0.64
QKI-213	ENST00000544361	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.03	□□□□□ -0.64	1e-8	■■■■□ 24.8
QKI-213	ENST00000544361	PCDHGA4	Q9Y5G9	962 aa		11.03	□□□□□ -0.64
QKI-213	ENST00000544361	HS3ST6	Q96QI5	342 aa		11.01	□□□□□ -0.65
QKI-213	ENST00000544361	ERBB3	P21860	1342 aa		11.01	□□□□□ -0.65
QKI-213	ENST00000544361	NUDT7	P0C024	238 aa		11	□□□□□ -0.65
QKI-213	ENST00000544361	MFSD10	Q14728	455 aa		11	□□□□□ -0.65
QKI-213	ENST00000544361	CDAN1	Q8IWY9	1227 aa		11	□□□□□ -0.65
QKI-213	ENST00000544361	PTCD2	Q8WV60	388 aa	Known RBP	10.99	□□□□□ -0.65
QKI-213	ENST00000544361	PCDH10	Q9P2E7	1040 aa		10.99	□□□□□ -0.65
QKI-213	ENST00000544361	POTEB3	A0JP26	581 aa		10.97	□□□□□ -0.65
QKI-213	ENST00000544361	VARS2	Q5ST30	1063 aa	Known RBP	10.97	□□□□□ -0.65
QKI-213	ENST00000544361	POTEB	Q6S5H4	581 aa		10.97	□□□□□ -0.65
QKI-213	ENST00000544361	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.97	□□□□□ -0.65	2e-9	■■■□□ 16.2
QKI-213	ENST00000544361	TBC1D12	O60347	775 aa		10.94	□□□□□ -0.66
QKI-213	ENST00000544361	OXER1	Q8TDS5	423 aa		10.94	□□□□□ -0.66
QKI-213	ENST00000544361	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.93	□□□□□ -0.66
QKI-213	ENST00000544361	LHX6	Q9UPM6	363 aa		10.91	□□□□□ -0.66
QKI-213	ENST00000544361	KDM4F	A0A1W2PPD8	638 aa		10.88	□□□□□ -0.67
QKI-213	ENST00000544361	PLCB2	Q00722	1185 aa		10.88	□□□□□ -0.67
QKI-213	ENST00000544361	TSHZ2	Q9NRE2	1034 aa		10.88	□□□□□ -0.67
QKI-213	ENST00000544361	EMILIN3	Q9NT22	766 aa		10.88	□□□□□ -0.67
QKI-213	ENST00000544361	MAP3K9	P80192	1104 aa		10.85	□□□□□ -0.67
QKI-213	ENST00000544361	CAMK2B	Q13554	666 aa		10.85	□□□□□ -0.67
QKI-213	ENST00000544361	ZNF687	Q8N1G0	1237 aa		10.85	□□□□□ -0.67
QKI-213	ENST00000544361	KRTAP3-3	Q9BYR6	98 aa		10.84	□□□□□ -0.67
QKI-213	ENST00000544361	KRTAP3-2	Q9BYR7	98 aa		10.84	□□□□□ -0.67
QKI-213	ENST00000544361	WDR70	Q9NW82	654 aa		10.84	□□□□□ -0.67
QKI-213	ENST00000544361	PSD	A5PKW4	1024 aa	Predicted RBP	10.83	□□□□□ -0.68
QKI-213	ENST00000544361	PLSCR2	Q9NRY7	297 aa		10.82	□□□□□ -0.68
QKI-213	ENST00000544361	EVI5	O60447	810 aa		10.81	□□□□□ -0.68
QKI-213	ENST00000544361	DPYSL4	O14531	572 aa		10.8	□□□□□ -0.68
QKI-213	ENST00000544361	E2F4	Q16254	413 aa		10.8	□□□□□ -0.68
QKI-213	ENST00000544361	PPP4R3B	Q5MIZ7	849 aa		10.78	□□□□□ -0.68
QKI-213	ENST00000544361	ZNF454	Q8N9F8	522 aa		10.77	□□□□□ -0.69
QKI-213	ENST00000544361	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.76	□□□□□ -0.69
QKI-213	ENST00000544361	PBX2	P40425	430 aa		10.75	□□□□□ -0.69
QKI-213	ENST00000544361	JPH4	Q96JJ6	628 aa		10.74	□□□□□ -0.69
QKI-213	ENST00000544361	AXIN2	Q9Y2T1	843 aa		10.74	□□□□□ -0.69
QKI-213	ENST00000544361	FOSB	P53539	338 aa		10.73	□□□□□ -0.69
QKI-213	ENST00000544361	HAP1	P54257	671 aa	Predicted RBP	10.73	□□□□□ -0.69
QKI-213	ENST00000544361	POTEE	Q6S8J3	1075 aa		10.72	□□□□□ -0.69
QKI-213	ENST00000544361	LSM11	P83369	360 aa	Known RBP eCLIP	10.71	□□□□□ -0.69
QKI-213	ENST00000544361	SPNS2	Q8IVW8	549 aa		10.71	□□□□□ -0.69
QKI-213	ENST00000544361	ARHGAP33	O14559	1287 aa		10.7	□□□□□ -0.7
QKI-213	ENST00000544361	PDIA6	Q15084	440 aa		10.7	□□□□□ -0.7
QKI-213	ENST00000544361	ANKRD13D	Q6ZTN6	518 aa		10.69	□□□□□ -0.7
QKI-213	ENST00000544361	KCNH8	Q96L42	1107 aa		10.68	□□□□□ -0.7
QKI-213	ENST00000544361	KCNK17	Q96T54	332 aa		10.68	□□□□□ -0.7
QKI-213	ENST00000544361	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.68	□□□□□ -0.7
QKI-213	ENST00000544361	PSEN2	P49810	448 aa		10.67	□□□□□ -0.7
QKI-213	ENST00000544361	ZDHHC16	Q969W1	377 aa		10.67	□□□□□ -0.7
QKI-213	ENST00000544361	PCDHGA10	Q9Y5H3	936 aa		10.67	□□□□□ -0.7
QKI-213	ENST00000544361	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.66	□□□□□ -0.7
QKI-213	ENST00000544361	KCNV2	Q8TDN2	545 aa		10.66	□□□□□ -0.7
QKI-213	ENST00000544361	BCL2L12	Q9HB09	334 aa		10.66	□□□□□ -0.7
QKI-213	ENST00000544361	PHF14	O94880	888 aa		10.65	□□□□□ -0.7
QKI-213	ENST00000544361	DDX12P	Q92771	950 aa		10.65	□□□□□ -0.7
QKI-213	ENST00000544361	TYW1B	Q6NUM6	668 aa		10.64	□□□□□ -0.71
QKI-213	ENST00000544361	ADAM33	Q9BZ11	813 aa		10.64	□□□□□ -0.71
QKI-213	ENST00000544361	PTPRE	P23469	700 aa		10.63	□□□□□ -0.71
QKI-213	ENST00000544361	MMRN1	Q13201	1228 aa		10.63	□□□□□ -0.71
QKI-213	ENST00000544361	DMRTA1	Q5VZB9	504 aa		10.63	□□□□□ -0.71
QKI-213	ENST00000544361	FBXW7	Q969H0	707 aa		10.63	□□□□□ -0.71
QKI-213	ENST00000544361	PTGER2	P43116	358 aa		10.62	□□□□□ -0.71
QKI-213	ENST00000544361	P3H3	Q8IVL6	736 aa		10.62	□□□□□ -0.71
QKI-213	ENST00000544361	NBR1	Q14596	966 aa		10.61	□□□□□ -0.71
QKI-213	ENST00000544361	ADGRD1	Q6QNK2	874 aa		10.6	□□□□□ -0.71
QKI-213	ENST00000544361	ARHGEF1	Q92888	912 aa	Known RBP	10.6	□□□□□ -0.71
QKI-213	ENST00000544361	EPAS1	Q99814	870 aa		10.6	□□□□□ -0.71

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