RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 MYO5CQ9NQX4 1742 aa18.06■□□□□ 0.48
COPS7A-217ENST00000543537 SCAPERQ9BY12 1400 aa18.05■□□□□ 0.48
COPS7A-217ENST00000543537 ADAMTSL3P82987 1691 aa18.03■□□□□ 0.48
COPS7A-217ENST00000543537 ZFYVE16Q7Z3T8 1539 aa18■□□□□ 0.47
COPS7A-217ENST00000543537 BCORL1Q5H9F3 1711 aa17.99■□□□□ 0.47
COPS7A-217ENST00000543537 ZNF518AQ6AHZ1 1483 aa17.99■□□□□ 0.47
COPS7A-217ENST00000543537 YEATS2Q9ULM3 1422 aa17.98■□□□□ 0.47
COPS7A-217ENST00000543537 ARHGAP5Q13017 1502 aa17.98■□□□□ 0.47
COPS7A-217ENST00000543537 KDM5CP41229 1560 aa17.98■□□□□ 0.47
COPS7A-217ENST00000543537 CDC42BPBQ9Y5S2 1711 aa17.98■□□□□ 0.47
COPS7A-217ENST00000543537 PREX2Q70Z35 1606 aa17.98■□□□□ 0.47
COPS7A-217ENST00000543537 CEP162Q5TB80 1403 aa17.98■□□□□ 0.47
COPS7A-217ENST00000543537 PTPRMP28827 1452 aa17.96■□□□□ 0.47
COPS7A-217ENST00000543537 ATP10AO60312 1499 aa17.94■□□□□ 0.46
COPS7A-217ENST00000543537 ABCC1P33527 1531 aa17.93■□□□□ 0.46
COPS7A-217ENST00000543537 MLH3Q9UHC1 1453 aa17.92■□□□□ 0.46
COPS7A-217ENST00000543537 ARID4BQ4LE39 1312 aaPredicted RBP17.92■□□□□ 0.46
COPS7A-217ENST00000543537 GPATCH8Q9UKJ3 1502 aaKnown RBP17.92■□□□□ 0.46
COPS7A-217ENST00000543537 CDC42BPAQ5VT25 1732 aa17.92■□□□□ 0.46
COPS7A-217ENST00000543537 HECW2Q9P2P5 1572 aa17.91■□□□□ 0.46
COPS7A-217ENST00000543537 C9orf84Q5VXU9 1444 aa17.91■□□□□ 0.46
COPS7A-217ENST00000543537 SIGLEC1Q9BZZ2 1709 aa17.91■□□□□ 0.46
COPS7A-217ENST00000543537 MADDQ8WXG6 1647 aa17.9■□□□□ 0.46
COPS7A-217ENST00000543537 ARHGEF12Q9NZN5 1544 aa17.9■□□□□ 0.46
COPS7A-217ENST00000543537 AFAP1Q8N556 730 aa17.9■□□□□ 0.46
COPS7A-217ENST00000543537 REREQ9P2R6 1566 aa17.9■□□□□ 0.46
COPS7A-217ENST00000543537 MTUS2Q5JR59 1369 aa17.88■□□□□ 0.45
COPS7A-217ENST00000543537 TRAPPC8Q9Y2L5 1435 aa17.88■□□□□ 0.45
COPS7A-217ENST00000543537 KIAA1107Q9UPP5 1409 aa17.87■□□□□ 0.45
COPS7A-217ENST00000543537 ITSN2Q9NZM3 1697 aa17.86■□□□□ 0.45
COPS7A-217ENST00000543537 EHBP1L1Q8N3D4 1523 aa17.85■□□□□ 0.45
COPS7A-217ENST00000543537 DIP2CQ9Y2E4 1556 aa17.85■□□□□ 0.45
COPS7A-217ENST00000543537 SAMD9LQ8IVG5 1584 aa17.84■□□□□ 0.45
COPS7A-217ENST00000543537 PLEKHH2Q8IVE3 1493 aa17.84■□□□□ 0.45
COPS7A-217ENST00000543537 CCNB3Q8WWL7 1395 aa17.83■□□□□ 0.45
COPS7A-217ENST00000543537 AGLP35573 1532 aa17.82■□□□□ 0.44
COPS7A-217ENST00000543537 VPS8Q8N3P4 1428 aa17.81■□□□□ 0.44
COPS7A-217ENST00000543537 RIMS1Q86UR5 1692 aaKnown RBP17.81■□□□□ 0.44
COPS7A-217ENST00000543537 CFDP1Q9UEE9 299 aaPredicted RBP17.81■□□□□ 0.44
COPS7A-217ENST00000543537 ABCA6Q8N139 1617 aa17.8■□□□□ 0.44
COPS7A-217ENST00000543537 KIDINS220Q9ULH0 1771 aa17.8■□□□□ 0.44
COPS7A-217ENST00000543537 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
COPS7A-217ENST00000543537 SYCP2Q9BX26 1530 aa17.79■□□□□ 0.44
COPS7A-217ENST00000543537 LMTK3Q96Q04 1460 aa17.77■□□□□ 0.44
COPS7A-217ENST00000543537 FER1L4A9Z1Z3 1794 aa17.77■□□□□ 0.44
COPS7A-217ENST00000543537 MAP3K1Q13233 1512 aa17.77■□□□□ 0.43
COPS7A-217ENST00000543537 ZNF777Q9ULD5 760 aaPredicted RBP17.75■□□□□ 0.43
COPS7A-217ENST00000543537 MBD5Q9P267 1494 aa17.75■□□□□ 0.43
COPS7A-217ENST00000543537 HNRNPMP52272 730 aaKnown RBP eCLIP17.74■□□□□ 0.43
COPS7A-217ENST00000543537 MLECQ14165 292 aa17.74■□□□□ 0.43
COPS7A-217ENST00000543537 SPAG9O60271 1321 aaKnown RBP17.73■□□□□ 0.43
COPS7A-217ENST00000543537 MYT1LQ9UL68 1186 aa17.73■□□□□ 0.43
COPS7A-217ENST00000543537 NCOA2Q15596 1464 aa17.73■□□□□ 0.43
COPS7A-217ENST00000543537 INO80Q9ULG1 1556 aaPredicted RBP17.73■□□□□ 0.43
COPS7A-217ENST00000543537 TRIM26Q12899 539 aaPredicted RBP17.72■□□□□ 0.43
COPS7A-217ENST00000543537 SUPT6HQ7KZ85 1726 aaKnown RBP17.72■□□□□ 0.43
COPS7A-217ENST00000543537 ATP7AQ04656 1500 aa17.72■□□□□ 0.43
COPS7A-217ENST00000543537 LRRC9Q6ZRR7 1453 aa17.71■□□□□ 0.43
COPS7A-217ENST00000543537 RTEL1-TNFRSF6BF6WH68 1400 aa17.71■□□□□ 0.43
COPS7A-217ENST00000543537 PLXNC1O60486 1568 aa17.7■□□□□ 0.42
COPS7A-217ENST00000543537 APLP2Q06481 763 aa17.69■□□□□ 0.42
COPS7A-217ENST00000543537 ZNF644Q9H582 1327 aaPredicted RBP17.69■□□□□ 0.42
COPS7A-217ENST00000543537 RSPH4AQ5TD94 716 aa17.68■□□□□ 0.42
COPS7A-217ENST00000543537 CNTLNQ9NXG0 1405 aa17.68■□□□□ 0.42
COPS7A-217ENST00000543537 SETD1BQ9UPS6 1966 aaKnown RBP17.66■□□□□ 0.42
COPS7A-217ENST00000543537 A2MP01023 1474 aa17.66■□□□□ 0.42
COPS7A-217ENST00000543537 CAMSAP2Q08AD1 1489 aa17.64■□□□□ 0.41
COPS7A-217ENST00000543537 CCDC141Q6ZP82 1450 aa17.63■□□□□ 0.41
COPS7A-217ENST00000543537 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
COPS7A-217ENST00000543537 ARHGEF5Q12774 1597 aa17.62■□□□□ 0.41
COPS7A-217ENST00000543537 ADGBQ8N7X0 1667 aa17.62■□□□□ 0.41
COPS7A-217ENST00000543537 PREX1Q8TCU6 1659 aa17.62■□□□□ 0.41
COPS7A-217ENST00000543537 CEBPAP49715 358 aaPredicted RBP17.62■□□□□ 0.41
COPS7A-217ENST00000543537 KANK4Q5T7N3 995 aaPredicted RBP17.61■□□□□ 0.41
COPS7A-217ENST00000543537 MIA2Q96PC5 1412 aa17.61■□□□□ 0.41
COPS7A-217ENST00000543537 MROH2AA6NES4 1674 aa17.61■□□□□ 0.41
COPS7A-217ENST00000543537 C3P01024 1663 aa17.61■□□□□ 0.41
COPS7A-217ENST00000543537 DHX29Q7Z478 1369 aaKnown RBP17.6■□□□□ 0.41
COPS7A-217ENST00000543537 NPATQ14207 1427 aa17.59■□□□□ 0.41
COPS7A-217ENST00000543537 ESF1Q9H501 851 aaKnown RBP17.59■□□□□ 0.41
COPS7A-217ENST00000543537 UHRF1BP1Q6BDS2 1440 aa17.58■□□□□ 0.41
COPS7A-217ENST00000543537 HSPA2P54652 639 aa17.58■□□□□ 0.4
COPS7A-217ENST00000543537 ILDR1Q86SU0 546 aaPredicted RBP17.58■□□□□ 0.4
COPS7A-217ENST00000543537 MYOM3Q5VTT5 1437 aa17.57■□□□□ 0.4
COPS7A-217ENST00000543537 PLPPR3Q6T4P5 718 aa17.57■□□□□ 0.4
COPS7A-217ENST00000543537 ZMYM3Q14202 1370 aa17.56■□□□□ 0.4
COPS7A-217ENST00000543537 FAM135AQ9P2D6 1515 aa17.55■□□□□ 0.4
COPS7A-217ENST00000543537 MAST1Q9Y2H9 1570 aa17.53■□□□□ 0.4
COPS7A-217ENST00000543537 TSPY4P0CV99 314 aa17.52■□□□□ 0.4
COPS7A-217ENST00000543537 TSPY10P0CW01 314 aa17.52■□□□□ 0.4
COPS7A-217ENST00000543537 PTPRKQ15262 1439 aa17.5■□□□□ 0.39
COPS7A-217ENST00000543537 GGT6Q6P531 493 aa17.5■□□□□ 0.39
COPS7A-217ENST00000543537 CLTCQ00610 1675 aaKnown RBP17.49■□□□□ 0.39
COPS7A-217ENST00000543537 PCGF6Q9BYE7 350 aa17.49■□□□□ 0.39
COPS7A-217ENST00000543537 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
COPS7A-217ENST00000543537 STRCQ7RTU9 1775 aa17.47■□□□□ 0.39
COPS7A-217ENST00000543537 SHANK2Q9UPX8 1470 aa17.46■□□□□ 0.39
COPS7A-217ENST00000543537 KIF3BO15066 747 aa17.46■□□□□ 0.39
COPS7A-217ENST00000543537 TCOF1Q13428 1488 aaKnown RBP17.45■□□□□ 0.38
COPS7A-217ENST00000543537 KDM5DQ9BY66 1539 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms