RNA–Protein interactions for RNA: ENST00000543496.3

TPBG-203, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-203ENST00000543496 KIF7Q2M1P5 1343 aa23.51■■□□□ 1.35
TPBG-203ENST00000543496 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
TPBG-203ENST00000543496 PAK3O75914 559 aaPredicted RBP23.5■■□□□ 1.35
TPBG-203ENST00000543496 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
TPBG-203ENST00000543496 AKNAQ7Z591 1439 aa23.49■■□□□ 1.35
TPBG-203ENST00000543496 NESP48681 1621 aa23.48■■□□□ 1.35
TPBG-203ENST00000543496 ARID3CA6NKF2 412 aa23.48■■□□□ 1.35
TPBG-203ENST00000543496 TCOF1Q13428 1488 aaKnown RBP23.48■■□□□ 1.35
TPBG-203ENST00000543496 SENP3-EIF4A1A0A087X0R7 540 aa23.46■■□□□ 1.35
TPBG-203ENST00000543496 SALL2Q9Y467 1007 aaPredicted RBP23.45■■□□□ 1.34
TPBG-203ENST00000543496 POLR3GLQ9BT43 218 aa23.44■■□□□ 1.34
TPBG-203ENST00000543496 CCDC136Q96JN2 1154 aa23.42■■□□□ 1.34
TPBG-203ENST00000543496 ANKRD30BQ9BXX2 1392 aa23.4■■□□□ 1.34
TPBG-203ENST00000543496 RPRD2Q5VT52 1461 aaKnown RBP23.4■■□□□ 1.34
TPBG-203ENST00000543496 SMG6Q86US8 1419 aaKnown RBP23.4■■□□□ 1.34
TPBG-203ENST00000543496 GAPVD1Q14C86 1478 aa23.39■■□□□ 1.33
TPBG-203ENST00000543496 SPATA31E1Q6ZUB1 1445 aa23.39■■□□□ 1.33
TPBG-203ENST00000543496 NUDCQ9Y266 331 aa23.38■■□□□ 1.33
TPBG-203ENST00000543496 TEX14Q8IWB6 1497 aa23.38■■□□□ 1.33
TPBG-203ENST00000543496 SLC4A1APQ9BWU0 796 aaKnown RBP23.37■■□□□ 1.33
TPBG-203ENST00000543496 ANP32AP39687 249 aaKnown RBP23.35■■□□□ 1.33
TPBG-203ENST00000543496 ABCA5Q8WWZ7 1642 aa23.35■■□□□ 1.33
TPBG-203ENST00000543496 CDK13Q14004 1512 aaKnown RBP23.35■■□□□ 1.33
TPBG-203ENST00000543496 URB2Q14146 1524 aaKnown RBP23.35■■□□□ 1.33
TPBG-203ENST00000543496 POLR1AO95602 1720 aaPredicted RBP23.34■■□□□ 1.33
TPBG-203ENST00000543496 EPRSP07814 1512 aaKnown RBP23.34■■□□□ 1.33
TPBG-203ENST00000543496 MIA2Q96PC5 1412 aa23.33■■□□□ 1.33
TPBG-203ENST00000543496 KIF21AQ7Z4S6 1674 aa23.33■■□□□ 1.32
TPBG-203ENST00000543496 ZNF326Q5BKZ1 582 aaKnown RBP23.32■■□□□ 1.32
TPBG-203ENST00000543496 IPO9Q96P70 1041 aaKnown RBP23.31■■□□□ 1.32
TPBG-203ENST00000543496 LAMC3Q9Y6N6 1575 aa23.31■■□□□ 1.32
TPBG-203ENST00000543496 DHX29Q7Z478 1369 aaKnown RBP23.3■■□□□ 1.32
TPBG-203ENST00000543496 RNF123Q5XPI4 1314 aa23.29■■□□□ 1.32
TPBG-203ENST00000543496 ZBTB47Q9UFB7 747 aaPredicted RBP23.28■■□□□ 1.32
TPBG-203ENST00000543496 DAPK1P53355 1430 aa23.28■■□□□ 1.32
TPBG-203ENST00000543496 ZNF644Q9H582 1327 aaPredicted RBP23.27■■□□□ 1.32
TPBG-203ENST00000543496 RTL5Q5HYW3 569 aaPredicted RBP23.25■■□□□ 1.31
TPBG-203ENST00000543496 USP47Q96K76 1375 aa23.23■■□□□ 1.31
TPBG-203ENST00000543496 ROCK1Q13464 1354 aa23.23■■□□□ 1.31
TPBG-203ENST00000543496 ABCC5O15440 1437 aa23.23■■□□□ 1.31
TPBG-203ENST00000543496 BCORL1Q5H9F3 1711 aa23.22■■□□□ 1.31
TPBG-203ENST00000543496 TMC1Q8TDI8 760 aa23.22■■□□□ 1.31
TPBG-203ENST00000543496 PNISRQ8TF01 805 aaKnown RBP23.21■■□□□ 1.31
TPBG-203ENST00000543496 RTN4Q9NQC3 1192 aaKnown RBP23.19■■□□□ 1.3
TPBG-203ENST00000543496 NPM2Q86SE8 214 aaKnown RBP23.19■■□□□ 1.3
TPBG-203ENST00000543496 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.18■■□□□ 1.3
TPBG-203ENST00000543496 DNMT1P26358 1616 aaKnown RBP23.17■■□□□ 1.3
TPBG-203ENST00000543496 WDR62O43379 1518 aa23.17■■□□□ 1.3
TPBG-203ENST00000543496 IQGAP2Q13576 1575 aa23.16■■□□□ 1.3
TPBG-203ENST00000543496 IL27Q8NEV9 243 aa23.14■■□□□ 1.29
TPBG-203ENST00000543496 PZPP20742 1482 aa23.14■■□□□ 1.29
TPBG-203ENST00000543496 MBD5Q9P267 1494 aa23.11■■□□□ 1.29
TPBG-203ENST00000543496 EXOC6Q8TAG9 804 aa23.11■■□□□ 1.29
TPBG-203ENST00000543496 PKD2Q13563 968 aa23.09■■□□□ 1.29
TPBG-203ENST00000543496 RRP1P56182 461 aaKnown RBP23.09■■□□□ 1.29
TPBG-203ENST00000543496 KDM5CP41229 1560 aa23.08■■□□□ 1.29
TPBG-203ENST00000543496 KIAA1107Q9UPP5 1409 aa23.06■■□□□ 1.28
TPBG-203ENST00000543496 ARID4BQ4LE39 1312 aaPredicted RBP23.06■■□□□ 1.28
TPBG-203ENST00000543496 CARD11Q9BXL7 1154 aa23.06■■□□□ 1.28
TPBG-203ENST00000543496 LAS1LQ9Y4W2 734 aaKnown RBP23.06■■□□□ 1.28
TPBG-203ENST00000543496 KIF14Q15058 1648 aa23.06■■□□□ 1.28
TPBG-203ENST00000543496 ZNF777Q9ULD5 760 aaPredicted RBP23.05■■□□□ 1.28
TPBG-203ENST00000543496 KIF15Q9NS87 1388 aa23.05■■□□□ 1.28
TPBG-203ENST00000543496 ROCK2O75116 1388 aaKnown RBP23.04■■□□□ 1.28
TPBG-203ENST00000543496 TARBP1Q13395 1621 aaKnown RBP23.03■■□□□ 1.28
TPBG-203ENST00000543496 RCAN3Q9UKA8 241 aa23.03■■□□□ 1.28
TPBG-203ENST00000543496 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
TPBG-203ENST00000543496 LRPPRCP42704 1394 aaKnown RBP23.02■■□□□ 1.28
TPBG-203ENST00000543496 PDE4AP27815 886 aa23.02■■□□□ 1.28
TPBG-203ENST00000543496 TCERG1O14776 1098 aaKnown RBP23.02■■□□□ 1.28
TPBG-203ENST00000543496 CFDP1Q9UEE9 299 aaPredicted RBP23.02■■□□□ 1.28
TPBG-203ENST00000543496 KDM2AQ9Y2K7 1162 aa23.01■■□□□ 1.27
TPBG-203ENST00000543496 PDS5BQ9NTI5 1447 aa23.01■■□□□ 1.27
TPBG-203ENST00000543496 MYBBP1AQ9BQG0 1328 aaKnown RBP23.01■■□□□ 1.27
TPBG-203ENST00000543496 ST20-MTHFSA0A0A6YYL1 179 aa23■■□□□ 1.27
TPBG-203ENST00000543496 BRD4O60885 1362 aaPredicted RBP22.99■■□□□ 1.27
TPBG-203ENST00000543496 NEFMP07197 916 aa22.99■■□□□ 1.27
TPBG-203ENST00000543496 CAMSAP2Q08AD1 1489 aa22.99■■□□□ 1.27
TPBG-203ENST00000543496 NUP153P49790 1475 aaKnown RBP22.98■■□□□ 1.27
TPBG-203ENST00000543496 ADAMTS12P58397 1594 aa22.96■■□□□ 1.27
TPBG-203ENST00000543496 RALBP1Q15311 655 aa22.96■■□□□ 1.27
TPBG-203ENST00000543496 UBE2Q2Q8WVN8 375 aa22.95■■□□□ 1.27
TPBG-203ENST00000543496 BACH2Q9BYV9 841 aa22.95■■□□□ 1.27
TPBG-203ENST00000543496 RALGAPBQ86X10 1494 aa22.95■■□□□ 1.26
TPBG-203ENST00000543496 PRG4Q92954 1404 aaPredicted RBP22.95■■□□□ 1.26
TPBG-203ENST00000543496 ADGBQ8N7X0 1667 aa22.93■■□□□ 1.26
TPBG-203ENST00000543496 CDCA7LQ96GN5 454 aa22.92■■□□□ 1.26
TPBG-203ENST00000543496 UHRF1BP1Q6BDS2 1440 aa22.92■■□□□ 1.26
TPBG-203ENST00000543496 SKAP1Q86WV1 359 aa22.91■■□□□ 1.26
TPBG-203ENST00000543496 PLIN1O60240 522 aa22.91■■□□□ 1.26
TPBG-203ENST00000543496 DCAF11Q8TEB1 546 aa22.9■■□□□ 1.26
TPBG-203ENST00000543496 RAPGEF6Q8TEU7 1601 aa22.9■■□□□ 1.26
TPBG-203ENST00000543496 NUP155O75694 1391 aa22.9■■□□□ 1.26
TPBG-203ENST00000543496 ANKRD30AQ9BXX3 1397 aa22.9■■□□□ 1.26
TPBG-203ENST00000543496 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.26
TPBG-203ENST00000543496 KIAA0556O60303 1618 aa22.89■■□□□ 1.25
TPBG-203ENST00000543496 ANKRD50Q9ULJ7 1429 aa22.89■■□□□ 1.25
TPBG-203ENST00000543496 DISP1Q96F81 1524 aa22.88■■□□□ 1.25
TPBG-203ENST00000543496 MS4A1P11836 297 aa22.88■■□□□ 1.25
TPBG-203ENST00000543496 KTN1Q86UP2 1357 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms