RNA–Protein interactions for RNA: ENST00000543491.2

PCDH7-206, Transcript of protocadherin 7, humanhuman

APPRIS ALT2 BASIC

Gene PCDH7, Length 4,457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-206ENST00000543491 HMGXB3Q12766 1538 aa22.77■■□□□ 1.24
PCDH7-206ENST00000543491 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
PCDH7-206ENST00000543491 NUP155O75694 1391 aa22.73■■□□□ 1.23
PCDH7-206ENST00000543491 USP35Q9P2H5 1018 aa22.71■■□□□ 1.23
PCDH7-206ENST00000543491 ZNF644Q9H582 1327 aaPredicted RBP22.7■■□□□ 1.23
PCDH7-206ENST00000543491 NUDCQ9Y266 331 aa22.7■■□□□ 1.22
PCDH7-206ENST00000543491 ERICH3Q5RHP9 1530 aa22.69■■□□□ 1.22
PCDH7-206ENST00000543491 SLC24A1O60721 1099 aa22.68■■□□□ 1.22
PCDH7-206ENST00000543491 RGS3P49796 1198 aa22.67■■□□□ 1.22
PCDH7-206ENST00000543491 NAP1L5Q96NT1 182 aaPredicted RBP22.67■■□□□ 1.22
PCDH7-206ENST00000543491 POLA1P09884 1462 aaPredicted RBP22.67■■□□□ 1.22
PCDH7-206ENST00000543491 LRRC9Q6ZRR7 1453 aa22.66■■□□□ 1.22
PCDH7-206ENST00000543491 CCDC18Q5T9S5 1454 aa22.66■■□□□ 1.22
PCDH7-206ENST00000543491 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
PCDH7-206ENST00000543491 L1TD1Q5T7N2 865 aaKnown RBP22.63■■□□□ 1.21
PCDH7-206ENST00000543491 ANKRD30AQ9BXX3 1397 aa22.63■■□□□ 1.21
PCDH7-206ENST00000543491 CC2D1BQ5T0F9 858 aaKnown RBP22.63■■□□□ 1.21
PCDH7-206ENST00000543491 RCAN3Q9UKA8 241 aa22.61■■□□□ 1.21
PCDH7-206ENST00000543491 GOLGA6L22H0YM25 854 aa22.61■■□□□ 1.21
PCDH7-206ENST00000543491 FGD6Q6ZV73 1430 aa22.6■■□□□ 1.21
PCDH7-206ENST00000543491 ZBED9Q6R2W3 1325 aa22.59■■□□□ 1.21
PCDH7-206ENST00000543491 KNSTRNQ9Y448 316 aa22.59■■□□□ 1.21
PCDH7-206ENST00000543491 EFCAB2Q5VUJ9 269 aa22.59■■□□□ 1.21
PCDH7-206ENST00000543491 GGT6Q6P531 493 aa22.58■■□□□ 1.2
PCDH7-206ENST00000543491 PEG3Q9GZU2 1588 aa22.57■■□□□ 1.2
PCDH7-206ENST00000543491 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.57■■□□□ 1.2
PCDH7-206ENST00000543491 CDCA8Q53HL2 280 aa22.54■■□□□ 1.2
PCDH7-206ENST00000543491 CASKIN1Q8WXD9 1431 aa22.54■■□□□ 1.2
PCDH7-206ENST00000543491 PTPRGP23470 1445 aa22.53■■□□□ 1.2
PCDH7-206ENST00000543491 PRKRIP1Q9H875 184 aaPredicted RBP22.53■■□□□ 1.2
PCDH7-206ENST00000543491 TNNT2P45379 298 aaPredicted RBP22.52■■□□□ 1.2
PCDH7-206ENST00000543491 MYOM3Q5VTT5 1437 aa22.51■■□□□ 1.19
PCDH7-206ENST00000543491 RRBP1Q9P2E9 1410 aaKnown RBP22.5■■□□□ 1.19
PCDH7-206ENST00000543491 RALBP1Q15311 655 aa22.49■■□□□ 1.19
PCDH7-206ENST00000543491 NCOA2Q15596 1464 aa22.48■■□□□ 1.19
PCDH7-206ENST00000543491 KIF3BO15066 747 aa22.47■■□□□ 1.19
PCDH7-206ENST00000543491 PDE3BQ13370 1112 aa22.47■■□□□ 1.19
PCDH7-206ENST00000543491 NEUROD2Q15784 382 aa22.47■■□□□ 1.19
PCDH7-206ENST00000543491 MLECQ14165 292 aa22.46■■□□□ 1.19
PCDH7-206ENST00000543491 TMF1P82094 1093 aa22.45■■□□□ 1.18
PCDH7-206ENST00000543491 ARID4BQ4LE39 1312 aaPredicted RBP22.45■■□□□ 1.18
PCDH7-206ENST00000543491 GRIN2BQ13224 1484 aa22.45■■□□□ 1.18
PCDH7-206ENST00000543491 PDE4AP27815 886 aa22.44■■□□□ 1.18
PCDH7-206ENST00000543491 SAFB2Q14151 953 aaKnown RBP eCLIP22.44■■□□□ 1.18
PCDH7-206ENST00000543491 ROCK2O75116 1388 aaKnown RBP22.42■■□□□ 1.18
PCDH7-206ENST00000543491 GSE1Q14687 1217 aa22.42■■□□□ 1.18
PCDH7-206ENST00000543491 KTN1Q86UP2 1357 aaKnown RBP22.42■■□□□ 1.18
PCDH7-206ENST00000543491 PNNQ9H307 717 aaKnown RBP22.41■■□□□ 1.18
PCDH7-206ENST00000543491 MYH16Q9H6N6 1097 aa22.41■■□□□ 1.18
PCDH7-206ENST00000543491 SPAG9O60271 1321 aaKnown RBP22.41■■□□□ 1.18
PCDH7-206ENST00000543491 DNMBPQ6XZF7 1577 aa22.4■■□□□ 1.18
PCDH7-206ENST00000543491 PLEKHG5O94827 1062 aa22.4■■□□□ 1.18
PCDH7-206ENST00000543491 KANK1Q14678 1352 aa22.39■■□□□ 1.18
PCDH7-206ENST00000543491 MS4A1P11836 297 aa22.39■■□□□ 1.18
PCDH7-206ENST00000543491 FYCO1Q9BQS8 1478 aa22.39■■□□□ 1.17
PCDH7-206ENST00000543491 ST20-MTHFSA0A0A6YYL1 179 aa22.39■■□□□ 1.17
PCDH7-206ENST00000543491 RSPH6AQ9H0K4 717 aa22.38■■□□□ 1.17
PCDH7-206ENST00000543491 FTSJ3Q8IY81 847 aaKnown RBP22.37■■□□□ 1.17
PCDH7-206ENST00000543491 FRAT1Q92837 279 aaPredicted RBP22.36■■□□□ 1.17
PCDH7-206ENST00000543491 RSPH4AQ5TD94 716 aa22.36■■□□□ 1.17
PCDH7-206ENST00000543491 NLRP13Q86W25 1043 aa22.35■■□□□ 1.17
PCDH7-206ENST00000543491 UACAQ9BZF9 1416 aa22.35■■□□□ 1.17
PCDH7-206ENST00000543491 ABCA10Q8WWZ4 1543 aa22.35■■□□□ 1.17
PCDH7-206ENST00000543491 NCLP19338 710 aaKnown RBP22.34■■□□□ 1.17
PCDH7-206ENST00000543491 CFAP53Q96M91 514 aa22.34■■□□□ 1.17
PCDH7-206ENST00000543491 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
PCDH7-206ENST00000543491 POGKQ9P215 609 aa22.34■■□□□ 1.17
PCDH7-206ENST00000543491 TIAM1Q13009 1591 aa22.34■■□□□ 1.17
PCDH7-206ENST00000543491 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
PCDH7-206ENST00000543491 HSCBQ8IWL3 235 aa22.32■■□□□ 1.16
PCDH7-206ENST00000543491 NUTM2DQ5VT03 806 aaPredicted RBP22.32■■□□□ 1.16
PCDH7-206ENST00000543491 STK26Q9P289 416 aa22.31■■□□□ 1.16
PCDH7-206ENST00000543491 RRP1P56182 461 aaKnown RBP22.31■■□□□ 1.16
PCDH7-206ENST00000543491 SLKQ9H2G2 1235 aaPredicted RBP22.3■■□□□ 1.16
PCDH7-206ENST00000543491 PTMAP06454 111 aaKnown RBP22.3■■□□□ 1.16
PCDH7-206ENST00000543491 HSP90AB1P08238 724 aaKnown RBP22.29■■□□□ 1.16
PCDH7-206ENST00000543491 EXOC6Q8TAG9 804 aa22.28■■□□□ 1.16
PCDH7-206ENST00000543491 PRG4Q92954 1404 aaPredicted RBP22.27■■□□□ 1.15
PCDH7-206ENST00000543491 EFCAB5A4FU69 1503 aa22.26■■□□□ 1.15
PCDH7-206ENST00000543491 GOLGA6L3A6NEY3 463 aa22.26■■□□□ 1.15
PCDH7-206ENST00000543491 SNAPC4Q5SXM2 1469 aa22.25■■□□□ 1.15
PCDH7-206ENST00000543491 KIF15Q9NS87 1388 aa22.25■■□□□ 1.15
PCDH7-206ENST00000543491 URB2Q14146 1524 aaKnown RBP22.25■■□□□ 1.15
PCDH7-206ENST00000543491 DNTTIP2Q5QJE6 756 aaKnown RBP22.25■■□□□ 1.15
PCDH7-206ENST00000543491 MYBBP1AQ9BQG0 1328 aaKnown RBP22.24■■□□□ 1.15
PCDH7-206ENST00000543491 MSNP26038 577 aaKnown RBP22.24■■□□□ 1.15
PCDH7-206ENST00000543491 FAM161AQ3B820 660 aa22.24■■□□□ 1.15
PCDH7-206ENST00000543491 MSH5O43196 834 aa22.23■■□□□ 1.15
PCDH7-206ENST00000543491 CNTLNQ9NXG0 1405 aa22.23■■□□□ 1.15
PCDH7-206ENST00000543491 IFT140Q96RY7 1462 aa22.23■■□□□ 1.15
PCDH7-206ENST00000543491 CCDC144AA2RUR9 1427 aa22.23■■□□□ 1.15
PCDH7-206ENST00000543491 CENPQQ7L2Z9 268 aaPredicted RBP22.23■■□□□ 1.15
PCDH7-206ENST00000543491 SRPK2P78362 688 aaKnown RBP22.22■■□□□ 1.15
PCDH7-206ENST00000543491 USP47Q96K76 1375 aa22.21■■□□□ 1.15
PCDH7-206ENST00000543491 BIVM-ERCC5R4GMW8 1640 aa22.21■■□□□ 1.15
PCDH7-206ENST00000543491 C14orf37Q86TY3 774 aa22.21■■□□□ 1.15
PCDH7-206ENST00000543491 CCDC7Q96M83 1385 aa22.21■■□□□ 1.15
PCDH7-206ENST00000543491 U2SURPO15042 1029 aaKnown RBP22.2■■□□□ 1.14
PCDH7-206ENST00000543491 PAK3O75914 559 aaPredicted RBP22.2■■□□□ 1.14
PCDH7-206ENST00000543491 ANKRD50Q9ULJ7 1429 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms