RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 ANKRD30BQ9BXX2 1392 aa17.98■□□□□ 0.47
PTCD2-212ENST00000543322 RAPGEF6Q8TEU7 1601 aa17.98■□□□□ 0.47
PTCD2-212ENST00000543322 ABCC5O15440 1437 aa17.98■□□□□ 0.47
PTCD2-212ENST00000543322 HNRNPUQ00839 825 aaKnown RBP eCLIP17.97■□□□□ 0.47
PTCD2-212ENST00000543322 DNAJC5BQ9UF47 199 aa17.97■□□□□ 0.47
PTCD2-212ENST00000543322 NUP153P49790 1475 aaKnown RBP17.97■□□□□ 0.47
PTCD2-212ENST00000543322 CCDC7Q96M83 1385 aa17.96■□□□□ 0.47
PTCD2-212ENST00000543322 L3MBTL2Q969R5 705 aa17.96■□□□□ 0.47
PTCD2-212ENST00000543322 KIAA0586Q9BVV6 1533 aa17.96■□□□□ 0.46
PTCD2-212ENST00000543322 RBM19Q9Y4C8 960 aaKnown RBP17.94■□□□□ 0.46
PTCD2-212ENST00000543322 ADGBQ8N7X0 1667 aa17.94■□□□□ 0.46
PTCD2-212ENST00000543322 IFT140Q96RY7 1462 aa17.94■□□□□ 0.46
PTCD2-212ENST00000543322 SPATA31E1Q6ZUB1 1445 aa17.92■□□□□ 0.46
PTCD2-212ENST00000543322 ITSN2Q9NZM3 1697 aa17.92■□□□□ 0.46
PTCD2-212ENST00000543322 CROCC2H7BZ55 1655 aa17.91■□□□□ 0.46
PTCD2-212ENST00000543322 ADCY10Q96PN6 1610 aa17.9■□□□□ 0.46
PTCD2-212ENST00000543322 ZNF608Q9ULD9 1512 aaPredicted RBP17.89■□□□□ 0.45
PTCD2-212ENST00000543322 PZPP20742 1482 aa17.89■□□□□ 0.45
PTCD2-212ENST00000543322 C11orf95C9JLR9 678 aaPredicted RBP17.89■□□□□ 0.45
PTCD2-212ENST00000543322 FOXD1Q16676 465 aa17.89■□□□□ 0.45
PTCD2-212ENST00000543322 MBD5Q9P267 1494 aa17.88■□□□□ 0.45
PTCD2-212ENST00000543322 NBPF8Q3BBV2 869 aa17.88■□□□□ 0.45
PTCD2-212ENST00000543322 PRKRIP1Q9H875 184 aaPredicted RBP17.88■□□□□ 0.45
PTCD2-212ENST00000543322 ERICH6BQ5W0A0 696 aa17.88■□□□□ 0.45
PTCD2-212ENST00000543322 GRIN2AQ12879 1464 aa17.87■□□□□ 0.45
PTCD2-212ENST00000543322 CAMSAP2Q08AD1 1489 aa17.87■□□□□ 0.45
PTCD2-212ENST00000543322 ADGRL2O95490 1459 aa17.86■□□□□ 0.45
PTCD2-212ENST00000543322 ARID3CA6NKF2 412 aa17.86■□□□□ 0.45
PTCD2-212ENST00000543322 EIF4G3O43432 1585 aaKnown RBP17.85■□□□□ 0.45
PTCD2-212ENST00000543322 TROQ12816 1431 aaPredicted RBP17.85■□□□□ 0.45
PTCD2-212ENST00000543322 CCDC184Q52MB2 194 aa17.85■□□□□ 0.45
PTCD2-212ENST00000543322 ZNF644Q9H582 1327 aaPredicted RBP17.84■□□□□ 0.45
PTCD2-212ENST00000543322 KIF14Q15058 1648 aa17.83■□□□□ 0.45
PTCD2-212ENST00000543322 KIF7Q2M1P5 1343 aa17.83■□□□□ 0.44
PTCD2-212ENST00000543322 ZBED9Q6R2W3 1325 aa17.82■□□□□ 0.44
PTCD2-212ENST00000543322 SLC4A1APQ9BWU0 796 aaKnown RBP17.81■□□□□ 0.44
PTCD2-212ENST00000543322 CDK11AQ9UQ88 783 aaPredicted RBP17.81■□□□□ 0.44
PTCD2-212ENST00000543322 GPATCH8Q9UKJ3 1502 aaKnown RBP17.8■□□□□ 0.44
PTCD2-212ENST00000543322 PRG4Q92954 1404 aaPredicted RBP17.8■□□□□ 0.44
PTCD2-212ENST00000543322 KIAA1107Q9UPP5 1409 aa17.79■□□□□ 0.44
PTCD2-212ENST00000543322 BCORL1Q5H9F3 1711 aa17.78■□□□□ 0.44
PTCD2-212ENST00000543322 IRX6P78412 446 aaPredicted RBP17.78■□□□□ 0.44
PTCD2-212ENST00000543322 MRS2Q9HD23 443 aa17.78■□□□□ 0.44
PTCD2-212ENST00000543322 CEP170Q5SW79 1584 aa17.78■□□□□ 0.44
PTCD2-212ENST00000543322 KDM5CP41229 1560 aa17.77■□□□□ 0.44
PTCD2-212ENST00000543322 MAGI1Q96QZ7 1491 aaPredicted RBP17.76■□□□□ 0.43
PTCD2-212ENST00000543322 PPP4R2Q9NY27 417 aa17.76■□□□□ 0.43
PTCD2-212ENST00000543322 FANCIQ9NVI1 1328 aa17.76■□□□□ 0.43
PTCD2-212ENST00000543322 DHX29Q7Z478 1369 aaKnown RBP17.75■□□□□ 0.43
PTCD2-212ENST00000543322 CDC42BPAQ5VT25 1732 aa17.74■□□□□ 0.43
PTCD2-212ENST00000543322 PLB1Q6P1J6 1458 aa17.74■□□□□ 0.43
PTCD2-212ENST00000543322 SHANK2Q9UPX8 1470 aa17.74■□□□□ 0.43
PTCD2-212ENST00000543322 FAM9BQ8IZU0 186 aa17.74■□□□□ 0.43
PTCD2-212ENST00000543322 KDM5DQ9BY66 1539 aa17.72■□□□□ 0.43
PTCD2-212ENST00000543322 CFDP1Q9UEE9 299 aaPredicted RBP17.72■□□□□ 0.43
PTCD2-212ENST00000543322 UHRF1BP1Q6BDS2 1440 aa17.72■□□□□ 0.43
PTCD2-212ENST00000543322 USP47Q96K76 1375 aa17.71■□□□□ 0.43
PTCD2-212ENST00000543322 SYNJ2O15056 1496 aa17.71■□□□□ 0.43
PTCD2-212ENST00000543322 RALGAPBQ86X10 1494 aa17.71■□□□□ 0.43
PTCD2-212ENST00000543322 ANKRD30AQ9BXX3 1397 aa17.71■□□□□ 0.43
PTCD2-212ENST00000543322 MSH5O43196 834 aa17.71■□□□□ 0.42
PTCD2-212ENST00000543322 ARHGEF12Q9NZN5 1544 aa17.7■□□□□ 0.42
PTCD2-212ENST00000543322 ARID4BQ4LE39 1312 aaPredicted RBP17.7■□□□□ 0.42
PTCD2-212ENST00000543322 SMG6Q86US8 1419 aaKnown RBP17.68■□□□□ 0.42
PTCD2-212ENST00000543322 ANKRD50Q9ULJ7 1429 aa17.68■□□□□ 0.42
PTCD2-212ENST00000543322 ABCC10Q5T3U5 1492 aa17.68■□□□□ 0.42
PTCD2-212ENST00000543322 ABCA8O94911 1581 aa17.68■□□□□ 0.42
PTCD2-212ENST00000543322 NUP160Q12769 1436 aa17.67■□□□□ 0.42
PTCD2-212ENST00000543322 CARMIL2Q6F5E8 1435 aa17.66■□□□□ 0.42
PTCD2-212ENST00000543322 PKD2Q13563 968 aa17.65■□□□□ 0.42
PTCD2-212ENST00000543322 ROCK2O75116 1388 aaKnown RBP17.64■□□□□ 0.41
PTCD2-212ENST00000543322 E9PCH4 1651 aa17.64■□□□□ 0.41
PTCD2-212ENST00000543322 C9orf84Q5VXU9 1444 aa17.63■□□□□ 0.41
PTCD2-212ENST00000543322 ARHGEF5Q12774 1597 aa17.63■□□□□ 0.41
PTCD2-212ENST00000543322 PTPRGP23470 1445 aa17.61■□□□□ 0.41
PTCD2-212ENST00000543322 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
PTCD2-212ENST00000543322 ZNF777Q9ULD5 760 aaPredicted RBP17.6■□□□□ 0.41
PTCD2-212ENST00000543322 B4GALNT3Q6L9W6 998 aa17.59■□□□□ 0.41
PTCD2-212ENST00000543322 NUDCQ9Y266 331 aa17.58■□□□□ 0.4
PTCD2-212ENST00000543322 ATP10BO94823 1461 aa17.57■□□□□ 0.4
PTCD2-212ENST00000543322 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
PTCD2-212ENST00000543322 NUP155O75694 1391 aa17.57■□□□□ 0.4
PTCD2-212ENST00000543322 ZNF326Q5BKZ1 582 aaKnown RBP17.56■□□□□ 0.4
PTCD2-212ENST00000543322 KIF15Q9NS87 1388 aa17.55■□□□□ 0.4
PTCD2-212ENST00000543322 JPH4Q96JJ6 628 aa17.54■□□□□ 0.4
PTCD2-212ENST00000543322 KTN1Q86UP2 1357 aaKnown RBP17.54■□□□□ 0.4
PTCD2-212ENST00000543322 LRPPRCP42704 1394 aaKnown RBP17.53■□□□□ 0.4
PTCD2-212ENST00000543322 PREX2Q70Z35 1606 aa17.53■□□□□ 0.4
PTCD2-212ENST00000543322 ERCC6Q03468 1493 aa17.53■□□□□ 0.4
PTCD2-212ENST00000543322 TRPM1Q7Z4N2 1603 aa17.52■□□□□ 0.4
PTCD2-212ENST00000543322 PLEKHD1A6NEE1 506 aa17.52■□□□□ 0.4
PTCD2-212ENST00000543322 PNISRQ8TF01 805 aaKnown RBP17.52■□□□□ 0.4
PTCD2-212ENST00000543322 SAMD9LQ8IVG5 1584 aa17.52■□□□□ 0.39
PTCD2-212ENST00000543322 CARD11Q9BXL7 1154 aa17.51■□□□□ 0.39
PTCD2-212ENST00000543322 CDC42BPBQ9Y5S2 1711 aa17.51■□□□□ 0.39
PTCD2-212ENST00000543322 POLR3GLQ9BT43 218 aa17.5■□□□□ 0.39
PTCD2-212ENST00000543322 BRD4O60885 1362 aaPredicted RBP17.5■□□□□ 0.39
PTCD2-212ENST00000543322 FAM135AQ9P2D6 1515 aa17.5■□□□□ 0.39
PTCD2-212ENST00000543322 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
PTCD2-212ENST00000543322 ERICH6Q7L0X2 663 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms