RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 KIF27Q86VH2 1401 aa24.29■■□□□ 1.48
HDAC4-215ENST00000543185 GPATCH3Q96I76 525 aa24.27■■□□□ 1.48
HDAC4-215ENST00000543185 TMF1P82094 1093 aa24.25■■□□□ 1.47
HDAC4-215ENST00000543185 TULP1O00294 542 aaPredicted RBP24.25■■□□□ 1.47
HDAC4-215ENST00000543185 SKOR2Q2VWA4 1001 aaPredicted RBP24.25■■□□□ 1.47
HDAC4-215ENST00000543185 PMFBP1Q8TBY8 1022 aa24.25■■□□□ 1.47
HDAC4-215ENST00000543185 CCNB3Q8WWL7 1395 aa24.24■■□□□ 1.47
HDAC4-215ENST00000543185 MYO15BQ96JP2 1530 aa24.24■■□□□ 1.47
HDAC4-215ENST00000543185 A0A0G2JS52 829 aa24.24■■□□□ 1.47
HDAC4-215ENST00000543185 KIF3AQ9Y496 699 aa24.24■■□□□ 1.47
HDAC4-215ENST00000543185 CCDC70Q6NSX1 233 aa24.23■■□□□ 1.47
HDAC4-215ENST00000543185 KANK1Q14678 1352 aa24.21■■□□□ 1.47
HDAC4-215ENST00000543185 HDAC5Q9UQL6 1122 aa24.21■■□□□ 1.47
HDAC4-215ENST00000543185 TPM3P06753 285 aa24.21■■□□□ 1.47
HDAC4-215ENST00000543185 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.21■■□□□ 1.47
HDAC4-215ENST00000543185 EIF3AQ14152 1382 aaKnown RBP24.21■■□□□ 1.47
HDAC4-215ENST00000543185 CLSTN1O94985 981 aa24.2■■□□□ 1.46
HDAC4-215ENST00000543185 CHMP4CQ96CF2 233 aa24.2■■□□□ 1.46
HDAC4-215ENST00000543185 MTERF4Q7Z6M4 381 aaKnown RBP24.19■■□□□ 1.46
HDAC4-215ENST00000543185 ATP6V1DQ9Y5K8 247 aa24.19■■□□□ 1.46
HDAC4-215ENST00000543185 TEX35Q5T0J7 233 aa24.19■■□□□ 1.46
HDAC4-215ENST00000543185 ARHGAP35Q9NRY4 1499 aa24.19■■□□□ 1.46
HDAC4-215ENST00000543185 RALBP1Q15311 655 aa24.19■■□□□ 1.46
HDAC4-215ENST00000543185 NEUROD2Q15784 382 aa24.18■■□□□ 1.46
HDAC4-215ENST00000543185 GZF1Q9H116 711 aaPredicted RBP24.17■■□□□ 1.46
HDAC4-215ENST00000543185 KIF16BQ96L93 1317 aa24.17■■□□□ 1.46
HDAC4-215ENST00000543185 ST18O60284 1047 aa24.17■■□□□ 1.46
HDAC4-215ENST00000543185 NOM1Q5C9Z4 860 aaKnown RBP24.16■■□□□ 1.46
HDAC4-215ENST00000543185 RCAN3Q9UKA8 241 aa24.16■■□□□ 1.46
HDAC4-215ENST00000543185 PLEKHD1A6NEE1 506 aa24.16■■□□□ 1.46
HDAC4-215ENST00000543185 NPHP1O15259 732 aa24.15■■□□□ 1.46
HDAC4-215ENST00000543185 ROCK2O75116 1388 aaKnown RBP24.14■■□□□ 1.45
HDAC4-215ENST00000543185 CFDP1Q9UEE9 299 aaPredicted RBP24.13■■□□□ 1.45
HDAC4-215ENST00000543185 SPRYD3Q8NCJ5 442 aa24.12■■□□□ 1.45
HDAC4-215ENST00000543185 WRNQ14191 1432 aaPredicted RBP eCLIP24.12■■□□□ 1.45
HDAC4-215ENST00000543185 SLKQ9H2G2 1235 aaPredicted RBP24.11■■□□□ 1.45
HDAC4-215ENST00000543185 ZBTB7CA1YPR0 619 aa24.11■■□□□ 1.45
HDAC4-215ENST00000543185 POGKQ9P215 609 aa24.1■■□□□ 1.45
HDAC4-215ENST00000543185 CHMP7Q8WUX9 453 aaPredicted RBP24.09■■□□□ 1.45
HDAC4-215ENST00000543185 HMMRO75330 724 aa24.09■■□□□ 1.45
HDAC4-215ENST00000543185 SETD5Q9C0A6 1442 aa24.09■■□□□ 1.45
HDAC4-215ENST00000543185 CC2D1BQ5T0F9 858 aaKnown RBP24.09■■□□□ 1.45
HDAC4-215ENST00000543185 TSR1Q2NL82 804 aaKnown RBP24.08■■□□□ 1.45
HDAC4-215ENST00000543185 ARID3AQ99856 593 aa24.07■■□□□ 1.44
HDAC4-215ENST00000543185 U2SURPO15042 1029 aaKnown RBP24.07■■□□□ 1.44
HDAC4-215ENST00000543185 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.07■■□□□ 1.44
HDAC4-215ENST00000543185 GSE1Q14687 1217 aa24.06■■□□□ 1.44
HDAC4-215ENST00000543185 TPM1P09493 284 aa24.06■■□□□ 1.44
HDAC4-215ENST00000543185 RGL3Q3MIN7 710 aa24.06■■□□□ 1.44
HDAC4-215ENST00000543185 BAZ1AQ9NRL2 1556 aaPredicted RBP24.05■■□□□ 1.44
HDAC4-215ENST00000543185 PDE3BQ13370 1112 aa24.05■■□□□ 1.44
HDAC4-215ENST00000543185 NACADO15069 1562 aa24.05■■□□□ 1.44
HDAC4-215ENST00000543185 MAP7D2Q96T17 732 aa24.05■■□□□ 1.44
HDAC4-215ENST00000543185 CEP89Q96ST8 783 aa24.04■■□□□ 1.44
HDAC4-215ENST00000543185 RTF1Q92541 710 aaKnown RBP24.03■■□□□ 1.44
HDAC4-215ENST00000543185 ZNF771Q7L3S4 317 aaPredicted RBP24.02■■□□□ 1.44
HDAC4-215ENST00000543185 TAOK2Q9UL54 1235 aa24.02■■□□□ 1.44
HDAC4-215ENST00000543185 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
HDAC4-215ENST00000543185 ITPRIPQ8IWB1 547 aa24■■□□□ 1.43
HDAC4-215ENST00000543185 GOLGA6L19H0YKK7 550 aa24■■□□□ 1.43
HDAC4-215ENST00000543185 MORC1Q86VD1 984 aa23.98■■□□□ 1.43
HDAC4-215ENST00000543185 SPAG9O60271 1321 aaKnown RBP23.96■■□□□ 1.43
HDAC4-215ENST00000543185 TPM2P07951 284 aa23.96■■□□□ 1.43
HDAC4-215ENST00000543185 PLPPR3Q6T4P5 718 aa23.96■■□□□ 1.43
HDAC4-215ENST00000543185 CWC15Q9P013 229 aaKnown RBP23.96■■□□□ 1.43
HDAC4-215ENST00000543185 HDGFP51858 240 aaKnown RBP23.95■■□□□ 1.42
HDAC4-215ENST00000543185 VSIG10Q8N0Z9 540 aa23.95■■□□□ 1.42
HDAC4-215ENST00000543185 ACBD3Q9H3P7 528 aa23.94■■□□□ 1.42
HDAC4-215ENST00000543185 FANCIQ9NVI1 1328 aa23.94■■□□□ 1.42
HDAC4-215ENST00000543185 HSP90B1P14625 803 aaKnown RBP23.93■■□□□ 1.42
HDAC4-215ENST00000543185 CENPQQ7L2Z9 268 aaPredicted RBP23.92■■□□□ 1.42
HDAC4-215ENST00000543185 ARGLU1Q9NWB6 273 aaPredicted RBP23.92■■□□□ 1.42
HDAC4-215ENST00000543185 TSHZ2Q9NRE2 1034 aa23.92■■□□□ 1.42
HDAC4-215ENST00000543185 VPS8Q8N3P4 1428 aa23.92■■□□□ 1.42
HDAC4-215ENST00000543185 CDR1P51861 262 aa23.91■■□□□ 1.42
HDAC4-215ENST00000543185 MFAP1P55081 439 aaKnown RBP23.9■■□□□ 1.42
HDAC4-215ENST00000543185 IPO7O95373 1038 aaKnown RBP23.9■■□□□ 1.42
HDAC4-215ENST00000543185 RRP12Q5JTH9 1297 aaKnown RBP23.89■■□□□ 1.42
HDAC4-215ENST00000543185 RASSF8Q8NHQ8 419 aa23.88■■□□□ 1.41
HDAC4-215ENST00000543185 HOOK1Q9UJC3 728 aaKnown RBP23.88■■□□□ 1.41
HDAC4-215ENST00000543185 AK7Q96M32 723 aa23.87■■□□□ 1.41
HDAC4-215ENST00000543185 FAM161AQ3B820 660 aa23.87■■□□□ 1.41
HDAC4-215ENST00000543185 CCDC66A2RUB6 948 aa23.86■■□□□ 1.41
HDAC4-215ENST00000543185 LMOD3Q0VAK6 560 aa23.86■■□□□ 1.41
HDAC4-215ENST00000543185 TRIM6-TRIM34B2RNG4 842 aa23.85■■□□□ 1.41
HDAC4-215ENST00000543185 ANKRD20A12PQ8NF67 263 aa23.85■■□□□ 1.41
HDAC4-215ENST00000543185 DCAF11Q8TEB1 546 aa23.85■■□□□ 1.41
HDAC4-215ENST00000543185 BECN2A8MW95 431 aa23.85■■□□□ 1.41
HDAC4-215ENST00000543185 STK31Q9BXU1 1019 aa23.84■■□□□ 1.41
HDAC4-215ENST00000543185 CENPJQ9HC77 1338 aaPredicted RBP23.83■■□□□ 1.41
HDAC4-215ENST00000543185 KIF15Q9NS87 1388 aa23.83■■□□□ 1.41
HDAC4-215ENST00000543185 TPD52L1Q16890 204 aaPredicted RBP23.82■■□□□ 1.4
HDAC4-215ENST00000543185 HDGFL2Q7Z4V5 671 aaPredicted RBP23.82■■□□□ 1.4
HDAC4-215ENST00000543185 DDX49Q9Y6V7 483 aaKnown RBP23.81■■□□□ 1.4
HDAC4-215ENST00000543185 DCTN1Q14203 1278 aa23.81■■□□□ 1.4
HDAC4-215ENST00000543185 LRRFIP1Q32MZ4 808 aaKnown RBP23.8■■□□□ 1.4
HDAC4-215ENST00000543185 HSP90B2PQ58FF3 399 aa23.8■■□□□ 1.4
HDAC4-215ENST00000543185 H3BQV1 296 aa23.8■■□□□ 1.4
HDAC4-215ENST00000543185 IFFO2Q5TF58 517 aa23.8■■□□□ 1.4
HDAC4-215ENST00000543185 ISY1Q9ULR0 285 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 215.9 ms