RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 CLSPNQ9HAW4 1339 aa10.8□□□□□ -0.68
LRP6-206ENST00000543091 CDK13Q14004 1512 aaKnown RBP10.8□□□□□ -0.68
LRP6-206ENST00000543091 CTTNBP2Q8WZ74 1663 aa10.79□□□□□ -0.68
LRP6-206ENST00000543091 MIA2Q96PC5 1412 aa10.79□□□□□ -0.68
LRP6-206ENST00000543091 ZNF644Q9H582 1327 aaPredicted RBP10.79□□□□□ -0.68
LRP6-206ENST00000543091 AFAP1Q8N556 730 aa10.79□□□□□ -0.68
LRP6-206ENST00000543091 PHLDB1Q86UU1 1377 aa10.78□□□□□ -0.68
LRP6-206ENST00000543091 TIAM1Q13009 1591 aa10.78□□□□□ -0.68
LRP6-206ENST00000543091 MPHOSPH9Q99550 1183 aa10.77□□□□□ -0.69
LRP6-206ENST00000543091 KIF15Q9NS87 1388 aa10.77□□□□□ -0.69
LRP6-206ENST00000543091 SCAPERQ9BY12 1400 aa10.77□□□□□ -0.69
LRP6-206ENST00000543091 KIAA0556O60303 1618 aa10.77□□□□□ -0.69
LRP6-206ENST00000543091 RAB3GAP2Q9H2M9 1393 aa10.77□□□□□ -0.69
LRP6-206ENST00000543091 PCF11O94913 1555 aaKnown RBP10.76□□□□□ -0.69
LRP6-206ENST00000543091 SENP3Q9H4L4 574 aaPredicted RBP10.76□□□□□ -0.69
LRP6-206ENST00000543091 EID1Q9Y6B2 187 aa10.76□□□□□ -0.69
LRP6-206ENST00000543091 CEP170Q5SW79 1584 aa10.75□□□□□ -0.69
LRP6-206ENST00000543091 KIF14Q15058 1648 aa10.75□□□□□ -0.69
LRP6-206ENST00000543091 SUPT6HQ7KZ85 1726 aaKnown RBP10.75□□□□□ -0.69
LRP6-206ENST00000543091 ASXL2Q76L83 1435 aa10.74□□□□□ -0.69
LRP6-206ENST00000543091 RAPGEF6Q8TEU7 1601 aa10.74□□□□□ -0.69
LRP6-206ENST00000543091 ZNF316A6NFI3 1004 aaPredicted RBP10.74□□□□□ -0.69
LRP6-206ENST00000543091 ANP32CO43423 234 aa10.74□□□□□ -0.69
LRP6-206ENST00000543091 TIMELESSQ9UNS1 1208 aa10.74□□□□□ -0.69
LRP6-206ENST00000543091 POGZQ7Z3K3 1410 aa10.74□□□□□ -0.69
LRP6-206ENST00000543091 EIF4G2P78344 907 aaKnown RBP eCLIP10.74□□□□□ -0.69
LRP6-206ENST00000543091 SLC24A1O60721 1099 aa10.73□□□□□ -0.69
LRP6-206ENST00000543091 RAPGEF3O95398 923 aa10.73□□□□□ -0.69
LRP6-206ENST00000543091 POGKQ9P215 609 aa10.73□□□□□ -0.69
LRP6-206ENST00000543091 AEBP2Q6ZN18 517 aaPredicted RBP10.73□□□□□ -0.69
LRP6-206ENST00000543091 MAP3K1Q13233 1512 aa10.73□□□□□ -0.69
LRP6-206ENST00000543091 CDCA8Q53HL2 280 aa10.73□□□□□ -0.69
LRP6-206ENST00000543091 TEX14Q8IWB6 1497 aa10.73□□□□□ -0.69
LRP6-206ENST00000543091 ARHGEF11O15085 1522 aa10.72□□□□□ -0.69
LRP6-206ENST00000543091 NEFMP07197 916 aa10.72□□□□□ -0.69
LRP6-206ENST00000543091 DCAF11Q8TEB1 546 aa10.72□□□□□ -0.69
LRP6-206ENST00000543091 ATP10BO94823 1461 aa10.72□□□□□ -0.69
LRP6-206ENST00000543091 ABCC2Q92887 1545 aa10.71□□□□□ -0.69
LRP6-206ENST00000543091 CARD11Q9BXL7 1154 aa10.71□□□□□ -0.69
LRP6-206ENST00000543091 ANKRD50Q9ULJ7 1429 aa10.71□□□□□ -0.7
LRP6-206ENST00000543091 WDR7Q9Y4E6 1490 aa10.71□□□□□ -0.7
LRP6-206ENST00000543091 DIEXFQ68CQ4 756 aaKnown RBP10.7□□□□□ -0.7
LRP6-206ENST00000543091 SIN3AQ96ST3 1273 aa10.7□□□□□ -0.7
LRP6-206ENST00000543091 ADGRL1O94910 1474 aa10.7□□□□□ -0.7
LRP6-206ENST00000543091 C9orf84Q5VXU9 1444 aa10.7□□□□□ -0.7
LRP6-206ENST00000543091 DISP1Q96F81 1524 aa10.7□□□□□ -0.7
LRP6-206ENST00000543091 NUP153P49790 1475 aaKnown RBP10.69□□□□□ -0.7
LRP6-206ENST00000543091 CHD1O14646 1710 aa10.69□□□□□ -0.7
LRP6-206ENST00000543091 DENND4BO75064 1496 aaPredicted RBP10.68□□□□□ -0.7
LRP6-206ENST00000543091 FOXD1Q16676 465 aa10.68□□□□□ -0.7
LRP6-206ENST00000543091 YTHDC1Q96MU7 727 aaKnown RBP10.68□□□□□ -0.7
LRP6-206ENST00000543091 FANCAO15360 1455 aa10.68□□□□□ -0.7
LRP6-206ENST00000543091 CCDC144AA2RUR9 1427 aa10.67□□□□□ -0.7
LRP6-206ENST00000543091 CCDC141Q6ZP82 1450 aa10.67□□□□□ -0.7
LRP6-206ENST00000543091 NEFLP07196 543 aa10.66□□□□□ -0.7
LRP6-206ENST00000543091 RRBP1Q9P2E9 1410 aaKnown RBP10.66□□□□□ -0.7
LRP6-206ENST00000543091 DNAJC5Q9H3Z4 198 aa10.66□□□□□ -0.7
LRP6-206ENST00000543091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.65□□□□□ -0.7
LRP6-206ENST00000543091 AKNAQ7Z591 1439 aa10.65□□□□□ -0.7
LRP6-206ENST00000543091 TMC1Q8TDI8 760 aa10.65□□□□□ -0.71
LRP6-206ENST00000543091 SCAF1Q9H7N4 1312 aaKnown RBP10.64□□□□□ -0.71
LRP6-206ENST00000543091 PLCH2O75038 1416 aa10.64□□□□□ -0.71
LRP6-206ENST00000543091 VGFO15240 615 aaPredicted RBP10.64□□□□□ -0.71
LRP6-206ENST00000543091 DAPK1P53355 1430 aa10.63□□□□□ -0.71
LRP6-206ENST00000543091 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.62□□□□□ -0.71
LRP6-206ENST00000543091 CAMSAP2Q08AD1 1489 aa10.62□□□□□ -0.71
LRP6-206ENST00000543091 HAP1P54257 671 aaPredicted RBP10.62□□□□□ -0.71
LRP6-206ENST00000543091 STK26Q9P289 416 aa10.6□□□□□ -0.71
LRP6-206ENST00000543091 SAMD9Q5K651 1589 aa10.6□□□□□ -0.71
LRP6-206ENST00000543091 UHRF1BP1LA0JNW5 1464 aa10.6□□□□□ -0.71
LRP6-206ENST00000543091 STAC3Q96MF2 364 aa10.6□□□□□ -0.71
LRP6-206ENST00000543091 GPATCH8Q9UKJ3 1502 aaKnown RBP10.6□□□□□ -0.71
LRP6-206ENST00000543091 ROCK1Q13464 1354 aa10.59□□□□□ -0.71
LRP6-206ENST00000543091 TMF1P82094 1093 aa10.59□□□□□ -0.71
LRP6-206ENST00000543091 PPP6R1Q9UPN7 881 aa10.58□□□□□ -0.72
LRP6-206ENST00000543091 DDX10Q13206 875 aaKnown RBP10.58□□□□□ -0.72
LRP6-206ENST00000543091 EIF3AQ14152 1382 aaKnown RBP10.57□□□□□ -0.72
LRP6-206ENST00000543091 SLC52A1Q9NWF4 448 aa10.57□□□□□ -0.72
LRP6-206ENST00000543091 SRPK2P78362 688 aaKnown RBP10.57□□□□□ -0.72
LRP6-206ENST00000543091 THEMISQ8N1K5 641 aaPredicted RBP10.57□□□□□ -0.72
LRP6-206ENST00000543091 PTPN23Q9H3S7 1636 aa10.57□□□□□ -0.72
LRP6-206ENST00000543091 ROCK2O75116 1388 aaKnown RBP10.56□□□□□ -0.72
LRP6-206ENST00000543091 ZNF518AQ6AHZ1 1483 aa10.56□□□□□ -0.72
LRP6-206ENST00000543091 NUTM2DQ5VT03 806 aaPredicted RBP10.56□□□□□ -0.72
LRP6-206ENST00000543091 L3MBTL2Q969R5 705 aa10.56□□□□□ -0.72
LRP6-206ENST00000543091 KIAA1107Q9UPP5 1409 aa10.56□□□□□ -0.72
LRP6-206ENST00000543091 ITSN2Q9NZM3 1697 aa10.56□□□□□ -0.72
LRP6-206ENST00000543091 HFM1A2PYH4 1435 aa10.56□□□□□ -0.72
LRP6-206ENST00000543091 LMOD2Q6P5Q4 547 aa10.56□□□□□ -0.72
LRP6-206ENST00000543091 SAFB2Q14151 953 aaKnown RBP eCLIP10.55□□□□□ -0.72
LRP6-206ENST00000543091 KNSTRNQ9Y448 316 aa10.55□□□□□ -0.72
LRP6-206ENST00000543091 ABCC5O15440 1437 aa10.55□□□□□ -0.72
LRP6-206ENST00000543091 HIRIP3Q9BW71 556 aaPredicted RBP10.55□□□□□ -0.72
LRP6-206ENST00000543091 ABCC10Q5T3U5 1492 aa10.54□□□□□ -0.72
LRP6-206ENST00000543091 KDM5BQ9UGL1 1544 aa10.53□□□□□ -0.72
LRP6-206ENST00000543091 DHX57Q6P158 1386 aaKnown RBP10.53□□□□□ -0.72
LRP6-206ENST00000543091 DHX29Q7Z478 1369 aaKnown RBP10.53□□□□□ -0.72
LRP6-206ENST00000543091 ZBTB7CA1YPR0 619 aa10.53□□□□□ -0.72
LRP6-206ENST00000543091 PLEKHG5O94827 1062 aa10.53□□□□□ -0.72
LRP6-206ENST00000543091 ABCA8O94911 1581 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms