RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 DMRT2Q9Y5R5 561 aa14.85□□□□□ -0.03
UBC-211ENST00000542416 FMN1Q68DA7 1419 aa14.84□□□□□ -0.03
UBC-211ENST00000542416 ATP10AO60312 1499 aa14.84□□□□□ -0.03
UBC-211ENST00000542416 RIMS1Q86UR5 1692 aaKnown RBP14.84□□□□□ -0.03
UBC-211ENST00000542416 UBTFP17480 764 aaKnown RBP14.83□□□□□ -0.04
UBC-211ENST00000542416 C9orf84Q5VXU9 1444 aa14.83□□□□□ -0.04
UBC-211ENST00000542416 TTC37Q6PGP7 1564 aa14.82□□□□□ -0.04
UBC-211ENST00000542416 HECW1Q76N89 1606 aa14.81□□□□□ -0.04
UBC-211ENST00000542416 CDK13Q14004 1512 aaKnown RBP14.8□□□□□ -0.04
UBC-211ENST00000542416 ZNF518AQ6AHZ1 1483 aa14.79□□□□□ -0.04
UBC-211ENST00000542416 MYT1LQ9UL68 1186 aa14.79□□□□□ -0.04
UBC-211ENST00000542416 CLIP1P30622 1438 aa14.78□□□□□ -0.04
UBC-211ENST00000542416 ARHGEF12Q9NZN5 1544 aa14.77□□□□□ -0.04
UBC-211ENST00000542416 CEBPAP49715 358 aaPredicted RBP14.76□□□□□ -0.05
UBC-211ENST00000542416 AFAP1Q8N556 730 aa14.76□□□□□ -0.05
UBC-211ENST00000542416 ESF1Q9H501 851 aaKnown RBP14.76□□□□□ -0.05
UBC-211ENST00000542416 TROQ12816 1431 aaPredicted RBP14.75□□□□□ -0.05
UBC-211ENST00000542416 UHRF1BP1Q6BDS2 1440 aa14.75□□□□□ -0.05
UBC-211ENST00000542416 ARHGAP5Q13017 1502 aa14.71□□□□□ -0.05
UBC-211ENST00000542416 ARHGAP35Q9NRY4 1499 aa14.71□□□□□ -0.05
UBC-211ENST00000542416 FER1L4A9Z1Z3 1794 aa14.71□□□□□ -0.05
UBC-211ENST00000542416 KIF14Q15058 1648 aa14.7□□□□□ -0.06
UBC-211ENST00000542416 EHMT2Q96KQ7 1210 aa14.7□□□□□ -0.06
UBC-211ENST00000542416 MLH3Q9UHC1 1453 aa14.69□□□□□ -0.06
UBC-211ENST00000542416 SIGLEC1Q9BZZ2 1709 aa14.69□□□□□ -0.06
UBC-211ENST00000542416 KDM5CP41229 1560 aa14.68□□□□□ -0.06
UBC-211ENST00000542416 PTPRTO14522 1441 aa14.67□□□□□ -0.06
UBC-211ENST00000542416 MYO5CQ9NQX4 1742 aa14.67□□□□□ -0.06
UBC-211ENST00000542416 PREX1Q8TCU6 1659 aa14.67□□□□□ -0.06
UBC-211ENST00000542416 CNTLNQ9NXG0 1405 aa14.66□□□□□ -0.06
UBC-211ENST00000542416 TRAPPC8Q9Y2L5 1435 aa14.66□□□□□ -0.06
UBC-211ENST00000542416 REREQ9P2R6 1566 aa14.66□□□□□ -0.06
UBC-211ENST00000542416 AGLP35573 1532 aa14.66□□□□□ -0.06
UBC-211ENST00000542416 SETD1BQ9UPS6 1966 aaKnown RBP14.65□□□□□ -0.06
UBC-211ENST00000542416 DISP3Q9P2K9 1392 aa14.64□□□□□ -0.07
UBC-211ENST00000542416 CCDC18Q5T9S5 1454 aa14.63□□□□□ -0.07
UBC-211ENST00000542416 CASKIN1Q8WXD9 1431 aa14.62□□□□□ -0.07
UBC-211ENST00000542416 DIP2CQ9Y2E4 1556 aa14.62□□□□□ -0.07
UBC-211ENST00000542416 SOCS7O14512 581 aa14.6□□□□□ -0.07
UBC-211ENST00000542416 NPATQ14207 1427 aa14.59□□□□□ -0.07
UBC-211ENST00000542416 CHIC1Q5VXU3 224 aa14.59□□□□□ -0.07
UBC-211ENST00000542416 SPAG9O60271 1321 aaKnown RBP14.59□□□□□ -0.07
UBC-211ENST00000542416 IQSEC2Q5JU85 1478 aa14.58□□□□□ -0.08
UBC-211ENST00000542416 ABCC1P33527 1531 aa14.58□□□□□ -0.08
UBC-211ENST00000542416 ZNF777Q9ULD5 760 aaPredicted RBP14.58□□□□□ -0.08
UBC-211ENST00000542416 NCOA1Q15788 1441 aa14.58□□□□□ -0.08
UBC-211ENST00000542416 PPP6R1Q9UPN7 881 aa14.57□□□□□ -0.08
UBC-211ENST00000542416 ZMYM3Q14202 1370 aa14.57□□□□□ -0.08
UBC-211ENST00000542416 STRCQ7RTU9 1775 aa14.56□□□□□ -0.08
UBC-211ENST00000542416 ABCA6Q8N139 1617 aa14.55□□□□□ -0.08
UBC-211ENST00000542416 PKD2Q13563 968 aa14.55□□□□□ -0.08
UBC-211ENST00000542416 ILDR2Q71H61 639 aa14.55□□□□□ -0.08
UBC-211ENST00000542416 PREX2Q70Z35 1606 aa14.55□□□□□ -0.08
UBC-211ENST00000542416 CFDP1Q9UEE9 299 aaPredicted RBP14.54□□□□□ -0.08
UBC-211ENST00000542416 KIAA1107Q9UPP5 1409 aa14.54□□□□□ -0.08
UBC-211ENST00000542416 CDC42BPBQ9Y5S2 1711 aa14.53□□□□□ -0.08
UBC-211ENST00000542416 PLEKHH2Q8IVE3 1493 aa14.53□□□□□ -0.08
UBC-211ENST00000542416 FYCO1Q9BQS8 1478 aa14.53□□□□□ -0.08
UBC-211ENST00000542416 HNRNPMP52272 730 aaKnown RBP eCLIP14.53□□□□□ -0.085e-20■■■□□ 15.9
UBC-211ENST00000542416 C3P01024 1663 aa14.52□□□□□ -0.08
UBC-211ENST00000542416 LTBP4Q8N2S1 1624 aa14.52□□□□□ -0.09
UBC-211ENST00000542416 GPATCH8Q9UKJ3 1502 aaKnown RBP14.51□□□□□ -0.09
UBC-211ENST00000542416 CCNB3Q8WWL7 1395 aa14.5□□□□□ -0.09
UBC-211ENST00000542416 SAMD9LQ8IVG5 1584 aa14.5□□□□□ -0.09
UBC-211ENST00000542416 ITSN2Q9NZM3 1697 aa14.49□□□□□ -0.09
UBC-211ENST00000542416 NCKAP5LQ9HCH0 1330 aa14.49□□□□□ -0.09
UBC-211ENST00000542416 GGT6Q6P531 493 aa14.49□□□□□ -0.09
UBC-211ENST00000542416 KIDINS220Q9ULH0 1771 aa14.49□□□□□ -0.09
UBC-211ENST00000542416 UBAP1LF5GYI3 381 aa14.48□□□□□ -0.09
UBC-211ENST00000542416 A2MP01023 1474 aa14.48□□□□□ -0.09
UBC-211ENST00000542416 PLA2R1Q13018 1463 aa14.48□□□□□ -0.09
UBC-211ENST00000542416 CAMSAP1Q5T5Y3 1602 aa14.48□□□□□ -0.09
UBC-211ENST00000542416 SYCP2Q9BX26 1530 aa14.47□□□□□ -0.09
UBC-211ENST00000542416 MTUS2Q5JR59 1369 aa14.47□□□□□ -0.09
UBC-211ENST00000542416 ZNF335Q9H4Z2 1342 aaPredicted RBP14.46□□□□□ -0.09
UBC-211ENST00000542416 ATP7AQ04656 1500 aa14.46□□□□□ -0.1
UBC-211ENST00000542416 MROH2AA6NES4 1674 aa14.46□□□□□ -0.1
UBC-211ENST00000542416 PTPRKQ15262 1439 aa14.45□□□□□ -0.1
UBC-211ENST00000542416 LRRIQ1Q96JM4 1722 aa14.44□□□□□ -0.1
UBC-211ENST00000542416 SPATA31D1Q6ZQQ2 1576 aa14.44□□□□□ -0.1
UBC-211ENST00000542416 CDC42BPAQ5VT25 1732 aa14.43□□□□□ -0.1
UBC-211ENST00000542416 TCOF1Q13428 1488 aaKnown RBP14.43□□□□□ -0.1
UBC-211ENST00000542416 RSPH4AQ5TD94 716 aa14.42□□□□□ -0.1
UBC-211ENST00000542416 PLXNC1O60486 1568 aa14.42□□□□□ -0.1
UBC-211ENST00000542416 RTEL1-TNFRSF6BF6WH68 1400 aa14.41□□□□□ -0.1
UBC-211ENST00000542416 DHX29Q7Z478 1369 aaKnown RBP14.4□□□□□ -0.1
UBC-211ENST00000542416 CEP170BQ9Y4F5 1589 aaPredicted RBP14.39□□□□□ -0.11
UBC-211ENST00000542416 TOM1O60784 492 aa14.39□□□□□ -0.11
UBC-211ENST00000542416 INO80Q9ULG1 1556 aaPredicted RBP14.39□□□□□ -0.11
UBC-211ENST00000542416 A2ML1A8K2U0 1454 aa14.38□□□□□ -0.11
UBC-211ENST00000542416 ZNF644Q9H582 1327 aaPredicted RBP14.38□□□□□ -0.11
UBC-211ENST00000542416 KIF3BO15066 747 aa14.37□□□□□ -0.11
UBC-211ENST00000542416 ANKLE2Q86XL3 938 aa14.37□□□□□ -0.11
UBC-211ENST00000542416 THEMISQ8N1K5 641 aaPredicted RBP14.37□□□□□ -0.11
UBC-211ENST00000542416 SUPT6HQ7KZ85 1726 aaKnown RBP14.37□□□□□ -0.11
UBC-211ENST00000542416 MBD5Q9P267 1494 aa14.37□□□□□ -0.11
UBC-211ENST00000542416 TNRQ92752 1358 aa14.36□□□□□ -0.11
UBC-211ENST00000542416 WASHC2CQ9Y4E1 1318 aa14.36□□□□□ -0.11
UBC-211ENST00000542416 ZNF142P52746 1687 aaPredicted RBP14.36□□□□□ -0.11
UBC-211ENST00000542416 CEP162Q5TB80 1403 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms