RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 LOC105371045A0A1W2PR82 267 aa26.38■■□□□ 1.81
CCND1-205ENST00000542367 ZMYM4Q5VZL5 1548 aa26.38■■□□□ 1.81
CCND1-205ENST00000542367 POGZQ7Z3K3 1410 aa26.38■■□□□ 1.81
CCND1-205ENST00000542367 ARHGEF40Q8TER5 1519 aa26.37■■□□□ 1.81
CCND1-205ENST00000542367 MAGI2Q86UL8 1455 aa26.35■■□□□ 1.81
CCND1-205ENST00000542367 YEATS2Q9ULM3 1422 aa26.34■■□□□ 1.81
CCND1-205ENST00000542367 ZFYVE16Q7Z3T8 1539 aa26.34■■□□□ 1.81
CCND1-205ENST00000542367 CDC42BPBQ9Y5S2 1711 aa26.34■■□□□ 1.81
CCND1-205ENST00000542367 ADAMTSL3P82987 1691 aa26.31■■□□□ 1.8
CCND1-205ENST00000542367 AFAP1Q8N556 730 aa26.3■■□□□ 1.8
CCND1-205ENST00000542367 BCORL1Q5H9F3 1711 aa26.3■■□□□ 1.8
CCND1-205ENST00000542367 PREX2Q70Z35 1606 aa26.29■■□□□ 1.8
CCND1-205ENST00000542367 ZNF518AQ6AHZ1 1483 aa26.27■■□□□ 1.8
CCND1-205ENST00000542367 CDC42BPAQ5VT25 1732 aa26.25■■□□□ 1.79
CCND1-205ENST00000542367 MTUS2Q5JR59 1369 aa26.25■■□□□ 1.79
CCND1-205ENST00000542367 PTPRMP28827 1452 aa26.23■■□□□ 1.79
CCND1-205ENST00000542367 MYT1LQ9UL68 1186 aa26.23■■□□□ 1.79
CCND1-205ENST00000542367 ATP10AO60312 1499 aa26.23■■□□□ 1.79
CCND1-205ENST00000542367 ZNF777Q9ULD5 760 aaPredicted RBP26.22■■□□□ 1.79
CCND1-205ENST00000542367 GPATCH8Q9UKJ3 1502 aaKnown RBP26.22■■□□□ 1.79
CCND1-205ENST00000542367 SIGLEC1Q9BZZ2 1709 aa26.22■■□□□ 1.79
CCND1-205ENST00000542367 ARHGEF12Q9NZN5 1544 aa26.21■■□□□ 1.79
CCND1-205ENST00000542367 MADDQ8WXG6 1647 aa26.21■■□□□ 1.79
CCND1-205ENST00000542367 KDM5CP41229 1560 aa26.2■■□□□ 1.79
CCND1-205ENST00000542367 ABCC1P33527 1531 aa26.2■■□□□ 1.79
CCND1-205ENST00000542367 TRAPPC8Q9Y2L5 1435 aa26.2■■□□□ 1.78
CCND1-205ENST00000542367 MLECQ14165 292 aa26.19■■□□□ 1.78
CCND1-205ENST00000542367 C9orf84Q5VXU9 1444 aa26.18■■□□□ 1.78
CCND1-205ENST00000542367 HECW2Q9P2P5 1572 aa26.18■■□□□ 1.78
CCND1-205ENST00000542367 CCNB3Q8WWL7 1395 aa26.18■■□□□ 1.78
CCND1-205ENST00000542367 CFDP1Q9UEE9 299 aaPredicted RBP26.16■■□□□ 1.78
CCND1-205ENST00000542367 ITSN2Q9NZM3 1697 aa26.15■■□□□ 1.78
CCND1-205ENST00000542367 MLH3Q9UHC1 1453 aa26.14■■□□□ 1.78
CCND1-205ENST00000542367 SAMD9LQ8IVG5 1584 aa26.13■■□□□ 1.77
CCND1-205ENST00000542367 HNRNPMP52272 730 aaKnown RBP eCLIP26.13■■□□□ 1.77
CCND1-205ENST00000542367 EHBP1L1Q8N3D4 1523 aa26.13■■□□□ 1.77
CCND1-205ENST00000542367 RIMS1Q86UR5 1692 aaKnown RBP26.12■■□□□ 1.77
CCND1-205ENST00000542367 DIP2CQ9Y2E4 1556 aa26.09■■□□□ 1.77
CCND1-205ENST00000542367 VPS8Q8N3P4 1428 aa26.09■■□□□ 1.77
CCND1-205ENST00000542367 SYCP2Q9BX26 1530 aa26.09■■□□□ 1.77
CCND1-205ENST00000542367 PLPPR3Q6T4P5 718 aa26.08■■□□□ 1.77
CCND1-205ENST00000542367 ABCA6Q8N139 1617 aa26.06■■□□□ 1.76
CCND1-205ENST00000542367 KIAA1107Q9UPP5 1409 aa26.05■■□□□ 1.76
CCND1-205ENST00000542367 TIAM1Q13009 1591 aa26.05■■□□□ 1.76
CCND1-205ENST00000542367 KIDINS220Q9ULH0 1771 aa26.05■■□□□ 1.76
CCND1-205ENST00000542367 PLEKHH2Q8IVE3 1493 aa26.04■■□□□ 1.76
CCND1-205ENST00000542367 SPAG9O60271 1321 aaKnown RBP26.04■■□□□ 1.76
CCND1-205ENST00000542367 FER1L4A9Z1Z3 1794 aa26.03■■□□□ 1.76
CCND1-205ENST00000542367 ZNF644Q9H582 1327 aaPredicted RBP26.03■■□□□ 1.76
CCND1-205ENST00000542367 REREQ9P2R6 1566 aa26.03■■□□□ 1.76
CCND1-205ENST00000542367 NCOA2Q15596 1464 aa26■■□□□ 1.75
CCND1-205ENST00000542367 SUPT6HQ7KZ85 1726 aaKnown RBP25.99■■□□□ 1.75
CCND1-205ENST00000542367 AGLP35573 1532 aa25.96■■□□□ 1.75
CCND1-205ENST00000542367 LRRC9Q6ZRR7 1453 aa25.96■■□□□ 1.75
CCND1-205ENST00000542367 CEBPAP49715 358 aaPredicted RBP25.94■■□□□ 1.74
CCND1-205ENST00000542367 LMTK3Q96Q04 1460 aa25.93■■□□□ 1.74
CCND1-205ENST00000542367 MBD5Q9P267 1494 aa25.93■■□□□ 1.74
CCND1-205ENST00000542367 KANK4Q5T7N3 995 aaPredicted RBP25.93■■□□□ 1.74
CCND1-205ENST00000542367 ATP7AQ04656 1500 aa25.93■■□□□ 1.74
CCND1-205ENST00000542367 MAP3K1Q13233 1512 aa25.91■■□□□ 1.74
CCND1-205ENST00000542367 INO80Q9ULG1 1556 aaPredicted RBP25.9■■□□□ 1.74
CCND1-205ENST00000542367 ESF1Q9H501 851 aaKnown RBP25.89■■□□□ 1.74
CCND1-205ENST00000542367 HSPA2P54652 639 aa25.86■■□□□ 1.73
CCND1-205ENST00000542367 A2MP01023 1474 aa25.85■■□□□ 1.73
CCND1-205ENST00000542367 CAMSAP2Q08AD1 1489 aa25.85■■□□□ 1.73
CCND1-205ENST00000542367 APLP2Q06481 763 aa25.84■■□□□ 1.73
CCND1-205ENST00000542367 RSPH4AQ5TD94 716 aa25.84■■□□□ 1.73
CCND1-205ENST00000542367 RTEL1-TNFRSF6BF6WH68 1400 aa25.83■■□□□ 1.73
CCND1-205ENST00000542367 CCDC141Q6ZP82 1450 aa25.81■■□□□ 1.72
CCND1-205ENST00000542367 PLXNC1O60486 1568 aa25.8■■□□□ 1.72
CCND1-205ENST00000542367 CNTLNQ9NXG0 1405 aa25.79■■□□□ 1.72
CCND1-205ENST00000542367 C3P01024 1663 aa25.78■■□□□ 1.72
CCND1-205ENST00000542367 ADGBQ8N7X0 1667 aa25.78■■□□□ 1.72
CCND1-205ENST00000542367 GGT6Q6P531 493 aa25.78■■□□□ 1.72
CCND1-205ENST00000542367 TSPY4P0CV99 314 aa25.76■■□□□ 1.71
CCND1-205ENST00000542367 TSPY10P0CW01 314 aa25.76■■□□□ 1.71
CCND1-205ENST00000542367 SETD1BQ9UPS6 1966 aaKnown RBP25.76■■□□□ 1.71
CCND1-205ENST00000542367 PREX1Q8TCU6 1659 aa25.75■■□□□ 1.71
CCND1-205ENST00000542367 DHX29Q7Z478 1369 aaKnown RBP25.75■■□□□ 1.71
CCND1-205ENST00000542367 MYOM3Q5VTT5 1437 aa25.74■■□□□ 1.71
CCND1-205ENST00000542367 ARHGEF5Q12774 1597 aa25.73■■□□□ 1.71
CCND1-205ENST00000542367 MIA2Q96PC5 1412 aa25.72■■□□□ 1.71
CCND1-205ENST00000542367 ZMYM3Q14202 1370 aa25.72■■□□□ 1.71
CCND1-205ENST00000542367 UHRF1BP1Q6BDS2 1440 aa25.71■■□□□ 1.71
CCND1-205ENST00000542367 PPP6R1Q9UPN7 881 aa25.7■■□□□ 1.7
CCND1-205ENST00000542367 MROH2AA6NES4 1674 aa25.68■■□□□ 1.7
CCND1-205ENST00000542367 KIF3BO15066 747 aa25.68■■□□□ 1.7
CCND1-205ENST00000542367 ILDR1Q86SU0 546 aaPredicted RBP25.68■■□□□ 1.7
CCND1-205ENST00000542367 CLTCQ00610 1675 aaKnown RBP25.68■■□□□ 1.7
CCND1-205ENST00000542367 NPATQ14207 1427 aa25.63■■□□□ 1.69
CCND1-205ENST00000542367 MAST1Q9Y2H9 1570 aa25.61■■□□□ 1.69
CCND1-205ENST00000542367 PTPN23Q9H3S7 1636 aa25.57■■□□□ 1.68
CCND1-205ENST00000542367 PTPRKQ15262 1439 aa25.56■■□□□ 1.68
CCND1-205ENST00000542367 FGD6Q6ZV73 1430 aa25.55■■□□□ 1.68
CCND1-205ENST00000542367 WASHC2CQ9Y4E1 1318 aa25.55■■□□□ 1.68
CCND1-205ENST00000542367 STRCQ7RTU9 1775 aa25.54■■□□□ 1.68
CCND1-205ENST00000542367 DMRT2Q9Y5R5 561 aa25.54■■□□□ 1.68
CCND1-205ENST00000542367 ABCC5O15440 1437 aa25.54■■□□□ 1.68
CCND1-205ENST00000542367 TCOF1Q13428 1488 aaKnown RBP25.5■■□□□ 1.67
CCND1-205ENST00000542367 KDM5DQ9BY66 1539 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms