RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 KDM5BQ9UGL1 1544 aa16.34■□□□□ 0.21
SCG3-202ENST00000542355 ABCC10Q5T3U5 1492 aa16.33■□□□□ 0.2
SCG3-202ENST00000542355 DHX57Q6P158 1386 aaKnown RBP16.31■□□□□ 0.2
SCG3-202ENST00000542355 RRP7BPQ9NSQ0 103 aa16.29■□□□□ 0.2
SCG3-202ENST00000542355 ZCCHC11Q5TAX3 1644 aaKnown RBP16.29■□□□□ 0.2
SCG3-202ENST00000542355 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.2
SCG3-202ENST00000542355 HFM1A2PYH4 1435 aa16.27■□□□□ 0.2
SCG3-202ENST00000542355 CAMSAP2Q08AD1 1489 aa16.27■□□□□ 0.19
SCG3-202ENST00000542355 ABCC5O15440 1437 aa16.26■□□□□ 0.19
SCG3-202ENST00000542355 DAPK1P53355 1430 aa16.26■□□□□ 0.19
SCG3-202ENST00000542355 NPM1P06748 294 aaKnown RBP eCLIP16.26■□□□□ 0.19
SCG3-202ENST00000542355 ITSN2Q9NZM3 1697 aa16.26■□□□□ 0.19
SCG3-202ENST00000542355 NAIPQ13075 1403 aa16.25■□□□□ 0.19
SCG3-202ENST00000542355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.19
SCG3-202ENST00000542355 CDC42BPAQ5VT25 1732 aa16.23■□□□□ 0.19
SCG3-202ENST00000542355 CLSPNQ9HAW4 1339 aa16.22■□□□□ 0.19
SCG3-202ENST00000542355 PRKCSHP14314 528 aaPredicted RBP16.21■□□□□ 0.19
SCG3-202ENST00000542355 HNRNPMP52272 730 aaKnown RBP eCLIP16.21■□□□□ 0.19
SCG3-202ENST00000542355 CYB5RLQ6IPT4 315 aa16.21■□□□□ 0.19
SCG3-202ENST00000542355 TTC37Q6PGP7 1564 aa16.2■□□□□ 0.18
SCG3-202ENST00000542355 DNMT1P26358 1616 aaKnown RBP16.2■□□□□ 0.18
SCG3-202ENST00000542355 WDR7Q9Y4E6 1490 aa16.19■□□□□ 0.18
SCG3-202ENST00000542355 ROCK1Q13464 1354 aa16.19■□□□□ 0.18
SCG3-202ENST00000542355 ASXL2Q76L83 1435 aa16.18■□□□□ 0.18
SCG3-202ENST00000542355 AKNAQ7Z591 1439 aa16.18■□□□□ 0.18
SCG3-202ENST00000542355 ARHGAP5Q13017 1502 aa16.17■□□□□ 0.18
SCG3-202ENST00000542355 TSPY4P0CV99 314 aa16.17■□□□□ 0.18
SCG3-202ENST00000542355 TSPY10P0CW01 314 aa16.17■□□□□ 0.18
SCG3-202ENST00000542355 PLCH2O75038 1416 aa16.17■□□□□ 0.18
SCG3-202ENST00000542355 EFCAB2Q5VUJ9 269 aa16.16■□□□□ 0.18
SCG3-202ENST00000542355 PREX2Q70Z35 1606 aa16.15■□□□□ 0.18
SCG3-202ENST00000542355 CDC42BPBQ9Y5S2 1711 aa16.15■□□□□ 0.18
SCG3-202ENST00000542355 RSPH4AQ5TD94 716 aa16.14■□□□□ 0.17
SCG3-202ENST00000542355 MBD5Q9P267 1494 aa16.14■□□□□ 0.17
SCG3-202ENST00000542355 NCOA1Q15788 1441 aa16.14■□□□□ 0.17
SCG3-202ENST00000542355 TRIM52Q96A61 297 aa16.14■□□□□ 0.17
SCG3-202ENST00000542355 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
SCG3-202ENST00000542355 ANKRD30AQ9BXX3 1397 aa16.12■□□□□ 0.17
SCG3-202ENST00000542355 MAPKBP1O60336 1514 aa16.11■□□□□ 0.17
SCG3-202ENST00000542355 C9orf84Q5VXU9 1444 aa16.11■□□□□ 0.17
SCG3-202ENST00000542355 MYO5CQ9NQX4 1742 aa16.11■□□□□ 0.17
SCG3-202ENST00000542355 RIMBP3CA6NJZ7 1639 aa16.1■□□□□ 0.17
SCG3-202ENST00000542355 RIMBP3BA6NNM3 1639 aa16.1■□□□□ 0.17
SCG3-202ENST00000542355 RIMBP3Q9UFD9 1639 aa16.1■□□□□ 0.17
SCG3-202ENST00000542355 GCC2Q8IWJ2 1684 aa16.1■□□□□ 0.17
SCG3-202ENST00000542355 KDM6BO15054 1643 aa16.09■□□□□ 0.17
SCG3-202ENST00000542355 KIAA1107Q9UPP5 1409 aa16.09■□□□□ 0.17
SCG3-202ENST00000542355 ADGRL2O95490 1459 aa16.09■□□□□ 0.17
SCG3-202ENST00000542355 CCDC141Q6ZP82 1450 aa16.09■□□□□ 0.17
SCG3-202ENST00000542355 SYCP2Q9BX26 1530 aa16.08■□□□□ 0.16
SCG3-202ENST00000542355 SIN3AQ96ST3 1273 aa16.08■□□□□ 0.16
SCG3-202ENST00000542355 PLEKHH2Q8IVE3 1493 aa16.08■□□□□ 0.16
SCG3-202ENST00000542355 SHANK2Q9UPX8 1470 aa16.08■□□□□ 0.16
SCG3-202ENST00000542355 ARHGEF5Q12774 1597 aa16.08■□□□□ 0.16
SCG3-202ENST00000542355 NEUROD1Q13562 356 aa16.07■□□□□ 0.16
SCG3-202ENST00000542355 ARHGEF12Q9NZN5 1544 aa16.06■□□□□ 0.16
SCG3-202ENST00000542355 CROCC2H7BZ55 1655 aa16.05■□□□□ 0.16
SCG3-202ENST00000542355 ACIN1Q9UKV3 1341 aaKnown RBP16.05■□□□□ 0.16
SCG3-202ENST00000542355 ZBTB22O15209 634 aa16.05■□□□□ 0.16
SCG3-202ENST00000542355 MPHOSPH9Q99550 1183 aa16.05■□□□□ 0.16
SCG3-202ENST00000542355 ABCA9Q8IUA7 1624 aa16.04■□□□□ 0.16
SCG3-202ENST00000542355 ANKRD50Q9ULJ7 1429 aa16.04■□□□□ 0.16
SCG3-202ENST00000542355 KIF15Q9NS87 1388 aa16.04■□□□□ 0.16
SCG3-202ENST00000542355 FANCAO15360 1455 aa16.03■□□□□ 0.16
SCG3-202ENST00000542355 ARAP3Q8WWN8 1544 aa16.03■□□□□ 0.16
SCG3-202ENST00000542355 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.16
SCG3-202ENST00000542355 AFAP1Q8N556 730 aa16.02■□□□□ 0.16
SCG3-202ENST00000542355 CD109Q6YHK3 1445 aa16.01■□□□□ 0.15
SCG3-202ENST00000542355 TRAPPC8Q9Y2L5 1435 aa16.01■□□□□ 0.15
SCG3-202ENST00000542355 ABCC1P33527 1531 aa16■□□□□ 0.15
SCG3-202ENST00000542355 FOXD1Q16676 465 aa15.99■□□□□ 0.15
SCG3-202ENST00000542355 DENND4BO75064 1496 aaPredicted RBP15.98■□□□□ 0.15
SCG3-202ENST00000542355 SPAG9O60271 1321 aaKnown RBP15.97■□□□□ 0.15
SCG3-202ENST00000542355 SCAPERQ9BY12 1400 aa15.97■□□□□ 0.15
SCG3-202ENST00000542355 ADGRL1O94910 1474 aa15.96■□□□□ 0.15
SCG3-202ENST00000542355 MAST1Q9Y2H9 1570 aa15.95■□□□□ 0.14
SCG3-202ENST00000542355 MYT1LQ9UL68 1186 aa15.94■□□□□ 0.14
SCG3-202ENST00000542355 TIMELESSQ9UNS1 1208 aa15.94■□□□□ 0.14
SCG3-202ENST00000542355 NUP155O75694 1391 aa15.94■□□□□ 0.14
SCG3-202ENST00000542355 FAM69CQ0P6D2 419 aa15.93■□□□□ 0.14
SCG3-202ENST00000542355 PZPP20742 1482 aa15.92■□□□□ 0.14
SCG3-202ENST00000542355 PKD2Q13563 968 aa15.91■□□□□ 0.14
SCG3-202ENST00000542355 RTEL1-TNFRSF6BF6WH68 1400 aa15.91■□□□□ 0.14
SCG3-202ENST00000542355 TONSLQ96HA7 1378 aa15.9■□□□□ 0.14
SCG3-202ENST00000542355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
SCG3-202ENST00000542355 ZNF316A6NFI3 1004 aaPredicted RBP15.89■□□□□ 0.13
SCG3-202ENST00000542355 ANKRD30BQ9BXX2 1392 aa15.89■□□□□ 0.13
SCG3-202ENST00000542355 PLXNC1O60486 1568 aa15.89■□□□□ 0.13
SCG3-202ENST00000542355 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
SCG3-202ENST00000542355 DUOX2Q9NRD8 1548 aa15.88■□□□□ 0.13
SCG3-202ENST00000542355 PPP1R15AO75807 674 aaPredicted RBP15.87■□□□□ 0.13
SCG3-202ENST00000542355 ZFYVE16Q7Z3T8 1539 aa15.86■□□□□ 0.13
SCG3-202ENST00000542355 ERBINQ96RT1 1412 aa15.86■□□□□ 0.13
SCG3-202ENST00000542355 RAPGEF3O95398 923 aa15.85■□□□□ 0.13
SCG3-202ENST00000542355 ZNF518AQ6AHZ1 1483 aa15.85■□□□□ 0.13
SCG3-202ENST00000542355 GLI2P10070 1586 aa15.85■□□□□ 0.13
SCG3-202ENST00000542355 NEO1Q92859 1461 aa15.85■□□□□ 0.13
SCG3-202ENST00000542355 CFAP74Q9C0B2 1584 aa15.84■□□□□ 0.13
SCG3-202ENST00000542355 ATP7AQ04656 1500 aa15.84■□□□□ 0.13
SCG3-202ENST00000542355 KDM5DQ9BY66 1539 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms