RNA–Protein interactions for RNA: ENST00000542296.6

CERS1-202, Transcript of ceramide synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CERS1, Length 1,947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERS1-202ENST00000542296 DAPK1P53355 1430 aa30.89■■■□□ 2.54
CERS1-202ENST00000542296 WDR7Q9Y4E6 1490 aa30.89■■■□□ 2.54
CERS1-202ENST00000542296 ABCC5O15440 1437 aa30.88■■■□□ 2.53
CERS1-202ENST00000542296 MYO5CQ9NQX4 1742 aa30.87■■■□□ 2.53
CERS1-202ENST00000542296 DHX57Q6P158 1386 aaKnown RBP30.85■■■□□ 2.53
CERS1-202ENST00000542296 NAIPQ13075 1403 aa30.85■■■□□ 2.53
CERS1-202ENST00000542296 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
CERS1-202ENST00000542296 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
CERS1-202ENST00000542296 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
CERS1-202ENST00000542296 GCC2Q8IWJ2 1684 aa30.82■■■□□ 2.52
CERS1-202ENST00000542296 ROCK1Q13464 1354 aa30.82■■■□□ 2.52
CERS1-202ENST00000542296 CROCC2H7BZ55 1655 aa30.81■■■□□ 2.52
CERS1-202ENST00000542296 CLSPNQ9HAW4 1339 aa30.8■■■□□ 2.52
CERS1-202ENST00000542296 KCNH8Q96L42 1107 aa30.8■■■□□ 2.52
CERS1-202ENST00000542296 ASXL2Q76L83 1435 aa30.8■■■□□ 2.52
CERS1-202ENST00000542296 SAMD9LQ8IVG5 1584 aa30.79■■■□□ 2.52
CERS1-202ENST00000542296 PLCH2O75038 1416 aa30.78■■■□□ 2.52
CERS1-202ENST00000542296 ARAP3Q8WWN8 1544 aa30.77■■■□□ 2.52
CERS1-202ENST00000542296 ZNF777Q9ULD5 760 aaPredicted RBP30.77■■■□□ 2.52
CERS1-202ENST00000542296 ARHGEF5Q12774 1597 aa30.77■■■□□ 2.52
CERS1-202ENST00000542296 NPM1P06748 294 aaKnown RBP eCLIP30.76■■■□□ 2.51
CERS1-202ENST00000542296 ABCA9Q8IUA7 1624 aa30.75■■■□□ 2.51
CERS1-202ENST00000542296 ARHGAP5Q13017 1502 aa30.74■■■□□ 2.51
CERS1-202ENST00000542296 MBD5Q9P267 1494 aa30.73■■■□□ 2.51
CERS1-202ENST00000542296 SHANK2Q9UPX8 1470 aa30.73■■■□□ 2.51
CERS1-202ENST00000542296 ADGBQ8N7X0 1667 aa30.72■■■□□ 2.51
CERS1-202ENST00000542296 ADGRL2O95490 1459 aa30.72■■■□□ 2.51
CERS1-202ENST00000542296 CHIC2Q9UKJ5 165 aa30.72■■■□□ 2.51
CERS1-202ENST00000542296 PLEKHH2Q8IVE3 1493 aa30.69■■■□□ 2.5
CERS1-202ENST00000542296 KIAA1107Q9UPP5 1409 aa30.69■■■□□ 2.5
CERS1-202ENST00000542296 RSPH4AQ5TD94 716 aa30.67■■■□□ 2.5
CERS1-202ENST00000542296 RRP7BPQ9NSQ0 103 aa30.67■■■□□ 2.5
CERS1-202ENST00000542296 NCOA1Q15788 1441 aa30.66■■■□□ 2.5
CERS1-202ENST00000542296 MAPKBP1O60336 1514 aa30.63■■■□□ 2.49
CERS1-202ENST00000542296 CCDC141Q6ZP82 1450 aa30.63■■■□□ 2.49
CERS1-202ENST00000542296 CYB5RLQ6IPT4 315 aa30.63■■■□□ 2.49
CERS1-202ENST00000542296 EFCAB2Q5VUJ9 269 aa30.62■■■□□ 2.49
CERS1-202ENST00000542296 SYCP2Q9BX26 1530 aa30.62■■■□□ 2.49
CERS1-202ENST00000542296 HNRNPMP52272 730 aaKnown RBP eCLIP30.6■■■□□ 2.49
CERS1-202ENST00000542296 ACIN1Q9UKV3 1341 aaKnown RBP30.6■■■□□ 2.49
CERS1-202ENST00000542296 KDM6BO15054 1643 aa30.6■■■□□ 2.49
CERS1-202ENST00000542296 C9orf84Q5VXU9 1444 aa30.6■■■□□ 2.49
CERS1-202ENST00000542296 ANKRD30AQ9BXX3 1397 aa30.58■■■□□ 2.49
CERS1-202ENST00000542296 ABCC1P33527 1531 aa30.58■■■□□ 2.49
CERS1-202ENST00000542296 MAST1Q9Y2H9 1570 aa30.57■■■□□ 2.48
CERS1-202ENST00000542296 TSPY4P0CV99 314 aa30.55■■■□□ 2.48
CERS1-202ENST00000542296 TSPY10P0CW01 314 aa30.55■■■□□ 2.48
CERS1-202ENST00000542296 ARHGEF12Q9NZN5 1544 aa30.55■■■□□ 2.48
CERS1-202ENST00000542296 FANCAO15360 1455 aa30.51■■■□□ 2.47
CERS1-202ENST00000542296 PLXNC1O60486 1568 aa30.44■■■□□ 2.46
CERS1-202ENST00000542296 CD109Q6YHK3 1445 aa30.43■■■□□ 2.46
CERS1-202ENST00000542296 ANKRD50Q9ULJ7 1429 aa30.43■■■□□ 2.46
CERS1-202ENST00000542296 GLI2P10070 1586 aa30.42■■■□□ 2.46
CERS1-202ENST00000542296 CFAP74Q9C0B2 1584 aa30.41■■■□□ 2.46
CERS1-202ENST00000542296 KIF15Q9NS87 1388 aa30.4■■■□□ 2.46
CERS1-202ENST00000542296 TRAPPC8Q9Y2L5 1435 aa30.4■■■□□ 2.46
CERS1-202ENST00000542296 DENND4BO75064 1496 aaPredicted RBP30.37■■■□□ 2.45
CERS1-202ENST00000542296 ADGRL1O94910 1474 aa30.37■■■□□ 2.45
CERS1-202ENST00000542296 MAP3K4Q9Y6R4 1608 aa30.36■■■□□ 2.45
CERS1-202ENST00000542296 RTEL1-TNFRSF6BF6WH68 1400 aa30.35■■■□□ 2.45
CERS1-202ENST00000542296 TRIM52Q96A61 297 aa30.33■■■□□ 2.45
CERS1-202ENST00000542296 SCAPERQ9BY12 1400 aa30.31■■■□□ 2.44
CERS1-202ENST00000542296 MPHOSPH9Q99550 1183 aa30.3■■■□□ 2.44
CERS1-202ENST00000542296 DIP2BQ9P265 1576 aa30.3■■■□□ 2.44
CERS1-202ENST00000542296 NEO1Q92859 1461 aa30.3■■■□□ 2.44
CERS1-202ENST00000542296 ZFYVE16Q7Z3T8 1539 aa30.3■■■□□ 2.44
CERS1-202ENST00000542296 DUOX2Q9NRD8 1548 aa30.29■■■□□ 2.44
CERS1-202ENST00000542296 INO80Q9ULG1 1556 aaPredicted RBP30.28■■■□□ 2.44
CERS1-202ENST00000542296 KDM5DQ9BY66 1539 aa30.27■■■□□ 2.44
CERS1-202ENST00000542296 PZPP20742 1482 aa30.27■■■□□ 2.44
CERS1-202ENST00000542296 AFAP1Q8N556 730 aa30.27■■■□□ 2.44
CERS1-202ENST00000542296 SPAG9O60271 1321 aaKnown RBP30.25■■■□□ 2.43
CERS1-202ENST00000542296 TIMELESSQ9UNS1 1208 aa30.24■■■□□ 2.43
CERS1-202ENST00000542296 ZNF518AQ6AHZ1 1483 aa30.23■■■□□ 2.43
CERS1-202ENST00000542296 ERBINQ96RT1 1412 aa30.22■■■□□ 2.43
CERS1-202ENST00000542296 ATP7AQ04656 1500 aa30.22■■■□□ 2.43
CERS1-202ENST00000542296 SIN3AQ96ST3 1273 aa30.21■■■□□ 2.43
CERS1-202ENST00000542296 KDM5CP41229 1560 aa30.2■■■□□ 2.42
CERS1-202ENST00000542296 UNC13BO14795 1591 aa30.19■■■□□ 2.42
CERS1-202ENST00000542296 POGZQ7Z3K3 1410 aa30.18■■■□□ 2.42
CERS1-202ENST00000542296 SLC4A1APQ9BWU0 796 aaKnown RBP30.17■■■□□ 2.42
CERS1-202ENST00000542296 KIDINS220Q9ULH0 1771 aa30.14■■■□□ 2.42
CERS1-202ENST00000542296 NUP155O75694 1391 aa30.14■■■□□ 2.42
CERS1-202ENST00000542296 FAM69CQ0P6D2 419 aa30.14■■■□□ 2.42
CERS1-202ENST00000542296 ANKRD30BQ9BXX2 1392 aa30.13■■■□□ 2.41
CERS1-202ENST00000542296 MAGI2Q86UL8 1455 aa30.13■■■□□ 2.41
CERS1-202ENST00000542296 MLH3Q9UHC1 1453 aa30.12■■■□□ 2.41
CERS1-202ENST00000542296 NEUROD1Q13562 356 aa30.11■■■□□ 2.41
CERS1-202ENST00000542296 PPRC1Q5VV67 1664 aaKnown RBP30.1■■■□□ 2.41
CERS1-202ENST00000542296 KIF13AQ9H1H9 1805 aa30.1■■■□□ 2.41
CERS1-202ENST00000542296 FAM135AQ9P2D6 1515 aa30.07■■■□□ 2.4
CERS1-202ENST00000542296 IQGAP3Q86VI3 1631 aa30.07■■■□□ 2.4
CERS1-202ENST00000542296 RICTORQ6R327 1708 aa30.07■■■□□ 2.4
CERS1-202ENST00000542296 HECW2Q9P2P5 1572 aa30.06■■■□□ 2.4
CERS1-202ENST00000542296 EIF2AK4Q9P2K8 1649 aaKnown RBP30.05■■■□□ 2.4
CERS1-202ENST00000542296 DEPDC5O75140 1603 aa30.04■■■□□ 2.4
CERS1-202ENST00000542296 ZNF316A6NFI3 1004 aaPredicted RBP30.04■■■□□ 2.4
CERS1-202ENST00000542296 FOXD1Q16676 465 aa30.04■■■□□ 2.4
CERS1-202ENST00000542296 TEX14Q8IWB6 1497 aa30.03■■■□□ 2.4
CERS1-202ENST00000542296 DHX29Q7Z478 1369 aaKnown RBP30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms