RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 YEATS2Q9ULM3 1422 aa18.35■□□□□ 0.53
VTN-203ENST00000542029 RICTORQ6R327 1708 aa18.35■□□□□ 0.53
VTN-203ENST00000542029 ARHGAP5Q13017 1502 aa18.34■□□□□ 0.53
VTN-203ENST00000542029 ADAMTSL3P82987 1691 aa18.34■□□□□ 0.53
VTN-203ENST00000542029 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.53
VTN-203ENST00000542029 AFAP1Q8N556 730 aa18.33■□□□□ 0.52
VTN-203ENST00000542029 HECW2Q9P2P5 1572 aa18.33■□□□□ 0.52
VTN-203ENST00000542029 PCF11O94913 1555 aaKnown RBP18.32■□□□□ 0.52
VTN-203ENST00000542029 ATP10AO60312 1499 aa18.32■□□□□ 0.52
VTN-203ENST00000542029 MYT1LQ9UL68 1186 aa18.3■□□□□ 0.52
VTN-203ENST00000542029 C9orf84Q5VXU9 1444 aa18.3■□□□□ 0.52
VTN-203ENST00000542029 BCORL1Q5H9F3 1711 aa18.29■□□□□ 0.52
VTN-203ENST00000542029 MYO5CQ9NQX4 1742 aa18.29■□□□□ 0.52
VTN-203ENST00000542029 MLECQ14165 292 aa18.28■□□□□ 0.52
VTN-203ENST00000542029 MTUS2Q5JR59 1369 aa18.25■□□□□ 0.51
VTN-203ENST00000542029 MADDQ8WXG6 1647 aa18.24■□□□□ 0.51
VTN-203ENST00000542029 MLH3Q9UHC1 1453 aa18.24■□□□□ 0.51
VTN-203ENST00000542029 KDM5CP41229 1560 aa18.23■□□□□ 0.51
VTN-203ENST00000542029 CFDP1Q9UEE9 299 aaPredicted RBP18.23■□□□□ 0.51
VTN-203ENST00000542029 ZNF777Q9ULD5 760 aaPredicted RBP18.23■□□□□ 0.51
VTN-203ENST00000542029 CEP162Q5TB80 1403 aa18.22■□□□□ 0.51
VTN-203ENST00000542029 TRAPPC8Q9Y2L5 1435 aa18.22■□□□□ 0.51
VTN-203ENST00000542029 CCNB3Q8WWL7 1395 aa18.21■□□□□ 0.51
VTN-203ENST00000542029 LRRIQ1Q96JM4 1722 aa18.2■□□□□ 0.5
VTN-203ENST00000542029 GPATCH8Q9UKJ3 1502 aaKnown RBP18.2■□□□□ 0.5
VTN-203ENST00000542029 ABCC1P33527 1531 aa18.19■□□□□ 0.5
VTN-203ENST00000542029 KIAA1107Q9UPP5 1409 aa18.19■□□□□ 0.5
VTN-203ENST00000542029 PREX2Q70Z35 1606 aa18.19■□□□□ 0.5
VTN-203ENST00000542029 ARHGEF12Q9NZN5 1544 aa18.18■□□□□ 0.5
VTN-203ENST00000542029 PLPPR3Q6T4P5 718 aa18.18■□□□□ 0.5
VTN-203ENST00000542029 PLEKHH2Q8IVE3 1493 aa18.18■□□□□ 0.5
VTN-203ENST00000542029 ESF1Q9H501 851 aaKnown RBP18.17■□□□□ 0.5
VTN-203ENST00000542029 SPAG9O60271 1321 aaKnown RBP18.16■□□□□ 0.5
VTN-203ENST00000542029 CDC42BPBQ9Y5S2 1711 aa18.15■□□□□ 0.5
VTN-203ENST00000542029 LMTK3Q96Q04 1460 aa18.15■□□□□ 0.5
VTN-203ENST00000542029 HNRNPMP52272 730 aaKnown RBP eCLIP18.15■□□□□ 0.5
VTN-203ENST00000542029 ILDR1Q86SU0 546 aaPredicted RBP18.15■□□□□ 0.5
VTN-203ENST00000542029 REREQ9P2R6 1566 aa18.15■□□□□ 0.5
VTN-203ENST00000542029 RIMS1Q86UR5 1692 aaKnown RBP18.14■□□□□ 0.49
VTN-203ENST00000542029 AGLP35573 1532 aa18.13■□□□□ 0.49
VTN-203ENST00000542029 DIP2CQ9Y2E4 1556 aa18.13■□□□□ 0.49
VTN-203ENST00000542029 SIGLEC1Q9BZZ2 1709 aa18.1■□□□□ 0.49
VTN-203ENST00000542029 EHBP1L1Q8N3D4 1523 aa18.1■□□□□ 0.49
VTN-203ENST00000542029 HSPA2P54652 639 aa18.1■□□□□ 0.49
VTN-203ENST00000542029 LOC105371045A0A1W2PR82 267 aa18.09■□□□□ 0.49
VTN-203ENST00000542029 CEBPAP49715 358 aaPredicted RBP18.09■□□□□ 0.49
VTN-203ENST00000542029 CDC42BPAQ5VT25 1732 aa18.09■□□□□ 0.49
VTN-203ENST00000542029 SYCP2Q9BX26 1530 aa18.08■□□□□ 0.49
VTN-203ENST00000542029 CNTLNQ9NXG0 1405 aa18.08■□□□□ 0.49
VTN-203ENST00000542029 RSPH4AQ5TD94 716 aa18.08■□□□□ 0.48
VTN-203ENST00000542029 SAMD9LQ8IVG5 1584 aa18.08■□□□□ 0.48
VTN-203ENST00000542029 ITSN2Q9NZM3 1697 aa18.07■□□□□ 0.48
VTN-203ENST00000542029 ABCA6Q8N139 1617 aa18.05■□□□□ 0.48
VTN-203ENST00000542029 FER1L4A9Z1Z3 1794 aa18.05■□□□□ 0.48
VTN-203ENST00000542029 PPP6R1Q9UPN7 881 aa18.05■□□□□ 0.48
VTN-203ENST00000542029 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
VTN-203ENST00000542029 ZNF644Q9H582 1327 aaPredicted RBP18.04■□□□□ 0.48
VTN-203ENST00000542029 UHRF1BP1Q6BDS2 1440 aa18.03■□□□□ 0.48
VTN-203ENST00000542029 KIDINS220Q9ULH0 1771 aa18.02■□□□□ 0.48
VTN-203ENST00000542029 DMRT2Q9Y5R5 561 aa18.02■□□□□ 0.48
VTN-203ENST00000542029 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
VTN-203ENST00000542029 MBD5Q9P267 1494 aa18.01■□□□□ 0.47
VTN-203ENST00000542029 RTEL1-TNFRSF6BF6WH68 1400 aa18.01■□□□□ 0.47
VTN-203ENST00000542029 FBXO41Q8TF61 875 aa18.01■□□□□ 0.47
VTN-203ENST00000542029 ATP7AQ04656 1500 aa18.01■□□□□ 0.47
VTN-203ENST00000542029 A2MP01023 1474 aa18.01■□□□□ 0.47
VTN-203ENST00000542029 TIAM1Q13009 1591 aa18■□□□□ 0.47
VTN-203ENST00000542029 ZMYM3Q14202 1370 aa17.97■□□□□ 0.47
VTN-203ENST00000542029 TSPY4P0CV99 314 aa17.97■□□□□ 0.47
VTN-203ENST00000542029 TSPY10P0CW01 314 aa17.97■□□□□ 0.47
VTN-203ENST00000542029 GGT6Q6P531 493 aa17.97■□□□□ 0.47
VTN-203ENST00000542029 DHX29Q7Z478 1369 aaKnown RBP17.96■□□□□ 0.47
VTN-203ENST00000542029 SETD1BQ9UPS6 1966 aaKnown RBP17.96■□□□□ 0.47
VTN-203ENST00000542029 NPATQ14207 1427 aa17.96■□□□□ 0.47
VTN-203ENST00000542029 LRRC9Q6ZRR7 1453 aa17.95■□□□□ 0.46
VTN-203ENST00000542029 MAP3K1Q13233 1512 aa17.95■□□□□ 0.46
VTN-203ENST00000542029 APLP2Q06481 763 aa17.95■□□□□ 0.46
VTN-203ENST00000542029 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
VTN-203ENST00000542029 CCDC141Q6ZP82 1450 aa17.95■□□□□ 0.46
VTN-203ENST00000542029 SUPT6HQ7KZ85 1726 aaKnown RBP17.93■□□□□ 0.46
VTN-203ENST00000542029 PLXNC1O60486 1568 aa17.93■□□□□ 0.46
VTN-203ENST00000542029 PREX1Q8TCU6 1659 aa17.92■□□□□ 0.46
VTN-203ENST00000542029 CAMSAP2Q08AD1 1489 aa17.91■□□□□ 0.46
VTN-203ENST00000542029 KANK4Q5T7N3 995 aaPredicted RBP17.91■□□□□ 0.46
VTN-203ENST00000542029 KIF3BO15066 747 aa17.89■□□□□ 0.45
VTN-203ENST00000542029 MIA2Q96PC5 1412 aa17.89■□□□□ 0.45
VTN-203ENST00000542029 CERKQ8TCT0 537 aa17.88■□□□□ 0.45
VTN-203ENST00000542029 C3P01024 1663 aa17.87■□□□□ 0.45
VTN-203ENST00000542029 PTPRTO14522 1441 aa17.86■□□□□ 0.45
VTN-203ENST00000542029 PTPRKQ15262 1439 aa17.85■□□□□ 0.45
VTN-203ENST00000542029 MYOM3Q5VTT5 1437 aa17.85■□□□□ 0.45
VTN-203ENST00000542029 MROH2AA6NES4 1674 aa17.84■□□□□ 0.45
VTN-203ENST00000542029 ADGBQ8N7X0 1667 aa17.84■□□□□ 0.45
VTN-203ENST00000542029 ARHGEF5Q12774 1597 aa17.84■□□□□ 0.45
VTN-203ENST00000542029 WASHC2CQ9Y4E1 1318 aa17.83■□□□□ 0.44
VTN-203ENST00000542029 FAM135AQ9P2D6 1515 aa17.82■□□□□ 0.44
VTN-203ENST00000542029 NCOA1Q15788 1441 aa17.82■□□□□ 0.44
VTN-203ENST00000542029 PKD2Q13563 968 aa17.81■□□□□ 0.44
VTN-203ENST00000542029 PLA2R1Q13018 1463 aa17.76■□□□□ 0.43
VTN-203ENST00000542029 KDM5DQ9BY66 1539 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms