RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 MAGI2Q86UL8 1455 aa23.19■■□□□ 1.3
COPS7A-212ENST00000541866 BCORL1Q5H9F3 1711 aa23.19■■□□□ 1.3
COPS7A-212ENST00000541866 ZFYVE16Q7Z3T8 1539 aa23.18■■□□□ 1.3
COPS7A-212ENST00000541866 ILDR2Q71H61 639 aa23.18■■□□□ 1.3
COPS7A-212ENST00000541866 ZMYM4Q5VZL5 1548 aa23.18■■□□□ 1.3
COPS7A-212ENST00000541866 YEATS2Q9ULM3 1422 aa23.17■■□□□ 1.3
COPS7A-212ENST00000541866 MYT1LQ9UL68 1186 aa23.17■■□□□ 1.3
COPS7A-212ENST00000541866 KIF14Q15058 1648 aa23.17■■□□□ 1.3
COPS7A-212ENST00000541866 MLECQ14165 292 aa23.16■■□□□ 1.3
COPS7A-212ENST00000541866 CASKIN1Q8WXD9 1431 aa23.16■■□□□ 1.3
COPS7A-212ENST00000541866 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
COPS7A-212ENST00000541866 MYO5CQ9NQX4 1742 aa23.15■■□□□ 1.3
COPS7A-212ENST00000541866 ARHGAP5Q13017 1502 aa23.14■■□□□ 1.3
COPS7A-212ENST00000541866 MADDQ8WXG6 1647 aa23.14■■□□□ 1.29
COPS7A-212ENST00000541866 CCDC18Q5T9S5 1454 aa23.12■■□□□ 1.29
COPS7A-212ENST00000541866 AFAP1Q8N556 730 aa23.11■■□□□ 1.29
COPS7A-212ENST00000541866 ATP10AO60312 1499 aa23.09■■□□□ 1.29
COPS7A-212ENST00000541866 PCF11O94913 1555 aaKnown RBP23.08■■□□□ 1.29
COPS7A-212ENST00000541866 LRRIQ1Q96JM4 1722 aa23.08■■□□□ 1.28
COPS7A-212ENST00000541866 ZNF518AQ6AHZ1 1483 aa23.07■■□□□ 1.28
COPS7A-212ENST00000541866 RIMS1Q86UR5 1692 aaKnown RBP23.06■■□□□ 1.28
COPS7A-212ENST00000541866 DISP3Q9P2K9 1392 aa23.05■■□□□ 1.28
COPS7A-212ENST00000541866 C9orf84Q5VXU9 1444 aa23.05■■□□□ 1.28
COPS7A-212ENST00000541866 FYCO1Q9BQS8 1478 aa23.04■■□□□ 1.28
COPS7A-212ENST00000541866 ZNF777Q9ULD5 760 aaPredicted RBP23.01■■□□□ 1.27
COPS7A-212ENST00000541866 SIGLEC1Q9BZZ2 1709 aa22.99■■□□□ 1.27
COPS7A-212ENST00000541866 CDC42BPBQ9Y5S2 1711 aa22.97■■□□□ 1.27
COPS7A-212ENST00000541866 HSPA2P54652 639 aa22.96■■□□□ 1.27
COPS7A-212ENST00000541866 KDM5CP41229 1560 aa22.96■■□□□ 1.27
COPS7A-212ENST00000541866 PREX2Q70Z35 1606 aa22.95■■□□□ 1.26
COPS7A-212ENST00000541866 TRAPPC8Q9Y2L5 1435 aa22.95■■□□□ 1.26
COPS7A-212ENST00000541866 MLH3Q9UHC1 1453 aa22.94■■□□□ 1.26
COPS7A-212ENST00000541866 ESF1Q9H501 851 aaKnown RBP22.93■■□□□ 1.26
COPS7A-212ENST00000541866 FER1L4A9Z1Z3 1794 aa22.93■■□□□ 1.26
COPS7A-212ENST00000541866 ARHGEF12Q9NZN5 1544 aa22.92■■□□□ 1.26
COPS7A-212ENST00000541866 CEBPAP49715 358 aaPredicted RBP22.92■■□□□ 1.26
COPS7A-212ENST00000541866 CFDP1Q9UEE9 299 aaPredicted RBP22.92■■□□□ 1.26
COPS7A-212ENST00000541866 ABCC1P33527 1531 aa22.92■■□□□ 1.26
COPS7A-212ENST00000541866 MTUS2Q5JR59 1369 aa22.91■■□□□ 1.26
COPS7A-212ENST00000541866 HNRNPMP52272 730 aaKnown RBP eCLIP22.89■■□□□ 1.25
COPS7A-212ENST00000541866 CCNB3Q8WWL7 1395 aa22.89■■□□□ 1.25
COPS7A-212ENST00000541866 GPATCH8Q9UKJ3 1502 aaKnown RBP22.88■■□□□ 1.25
COPS7A-212ENST00000541866 DIP2CQ9Y2E4 1556 aa22.88■■□□□ 1.25
COPS7A-212ENST00000541866 CDC42BPAQ5VT25 1732 aa22.88■■□□□ 1.25
COPS7A-212ENST00000541866 SPAG9O60271 1321 aaKnown RBP22.86■■□□□ 1.25
COPS7A-212ENST00000541866 ITSN2Q9NZM3 1697 aa22.85■■□□□ 1.25
COPS7A-212ENST00000541866 ABCA6Q8N139 1617 aa22.84■■□□□ 1.25
COPS7A-212ENST00000541866 REREQ9P2R6 1566 aa22.84■■□□□ 1.25
COPS7A-212ENST00000541866 CEP162Q5TB80 1403 aa22.83■■□□□ 1.25
COPS7A-212ENST00000541866 AGLP35573 1532 aa22.81■■□□□ 1.24
COPS7A-212ENST00000541866 SAMD9LQ8IVG5 1584 aa22.8■■□□□ 1.24
COPS7A-212ENST00000541866 PLEKHH2Q8IVE3 1493 aa22.8■■□□□ 1.24
COPS7A-212ENST00000541866 SYCP2Q9BX26 1530 aa22.8■■□□□ 1.24
COPS7A-212ENST00000541866 KIAA1107Q9UPP5 1409 aa22.8■■□□□ 1.24
COPS7A-212ENST00000541866 KIDINS220Q9ULH0 1771 aa22.78■■□□□ 1.24
COPS7A-212ENST00000541866 UHRF1BP1Q6BDS2 1440 aa22.75■■□□□ 1.23
COPS7A-212ENST00000541866 SPATA31D1Q6ZQQ2 1576 aa22.75■■□□□ 1.23
COPS7A-212ENST00000541866 LOC105371045A0A1W2PR82 267 aa22.74■■□□□ 1.23
COPS7A-212ENST00000541866 ZNF644Q9H582 1327 aaPredicted RBP22.74■■□□□ 1.23
COPS7A-212ENST00000541866 CNTLNQ9NXG0 1405 aa22.74■■□□□ 1.23
COPS7A-212ENST00000541866 SETD1BQ9UPS6 1966 aaKnown RBP22.73■■□□□ 1.23
COPS7A-212ENST00000541866 DMRT2Q9Y5R5 561 aa22.73■■□□□ 1.23
COPS7A-212ENST00000541866 PREX1Q8TCU6 1659 aa22.73■■□□□ 1.23
COPS7A-212ENST00000541866 EHBP1L1Q8N3D4 1523 aa22.72■■□□□ 1.23
COPS7A-212ENST00000541866 ATP7AQ04656 1500 aa22.7■■□□□ 1.22
COPS7A-212ENST00000541866 GGT6Q6P531 493 aa22.69■■□□□ 1.22
COPS7A-212ENST00000541866 A2MP01023 1474 aa22.68■■□□□ 1.22
COPS7A-212ENST00000541866 TIAM1Q13009 1591 aa22.67■■□□□ 1.22
COPS7A-212ENST00000541866 CERKQ8TCT0 537 aa22.67■■□□□ 1.22
COPS7A-212ENST00000541866 C3P01024 1663 aa22.67■■□□□ 1.22
COPS7A-212ENST00000541866 ZMYM3Q14202 1370 aa22.66■■□□□ 1.22
COPS7A-212ENST00000541866 SUPT6HQ7KZ85 1726 aaKnown RBP22.65■■□□□ 1.22
COPS7A-212ENST00000541866 NCOA2Q15596 1464 aa22.63■■□□□ 1.21
COPS7A-212ENST00000541866 MBD5Q9P267 1494 aa22.63■■□□□ 1.21
COPS7A-212ENST00000541866 RSPH4AQ5TD94 716 aa22.63■■□□□ 1.21
COPS7A-212ENST00000541866 INO80Q9ULG1 1556 aaPredicted RBP22.63■■□□□ 1.21
COPS7A-212ENST00000541866 PPP6R1Q9UPN7 881 aa22.62■■□□□ 1.21
COPS7A-212ENST00000541866 RTEL1-TNFRSF6BF6WH68 1400 aa22.6■■□□□ 1.21
COPS7A-212ENST00000541866 NPATQ14207 1427 aa22.59■■□□□ 1.21
COPS7A-212ENST00000541866 VPS8Q8N3P4 1428 aa22.58■■□□□ 1.21
COPS7A-212ENST00000541866 TSPY4P0CV99 314 aa22.58■■□□□ 1.21
COPS7A-212ENST00000541866 TSPY10P0CW01 314 aa22.58■■□□□ 1.21
COPS7A-212ENST00000541866 DHX29Q7Z478 1369 aaKnown RBP22.57■■□□□ 1.2
COPS7A-212ENST00000541866 PLXNC1O60486 1568 aa22.57■■□□□ 1.2
COPS7A-212ENST00000541866 MROH2AA6NES4 1674 aa22.55■■□□□ 1.2
COPS7A-212ENST00000541866 ADGBQ8N7X0 1667 aa22.55■■□□□ 1.2
COPS7A-212ENST00000541866 KIF3BO15066 747 aa22.55■■□□□ 1.2
COPS7A-212ENST00000541866 STRCQ7RTU9 1775 aa22.55■■□□□ 1.2
COPS7A-212ENST00000541866 CCDC141Q6ZP82 1450 aa22.54■■□□□ 1.2
COPS7A-212ENST00000541866 CAMSAP2Q08AD1 1489 aa22.54■■□□□ 1.2
COPS7A-212ENST00000541866 CLTCQ00610 1675 aaKnown RBP22.53■■□□□ 1.2
COPS7A-212ENST00000541866 PTPRTO14522 1441 aa22.53■■□□□ 1.2
COPS7A-212ENST00000541866 LRRC9Q6ZRR7 1453 aa22.53■■□□□ 1.2
COPS7A-212ENST00000541866 KANK4Q5T7N3 995 aaPredicted RBP22.5■■□□□ 1.19
COPS7A-212ENST00000541866 NCOA1Q15788 1441 aa22.49■■□□□ 1.19
COPS7A-212ENST00000541866 APLP2Q06481 763 aa22.49■■□□□ 1.19
COPS7A-212ENST00000541866 PTPRKQ15262 1439 aa22.48■■□□□ 1.19
COPS7A-212ENST00000541866 NCKAP5LQ9HCH0 1330 aa22.47■■□□□ 1.19
COPS7A-212ENST00000541866 WASHC2CQ9Y4E1 1318 aa22.47■■□□□ 1.19
COPS7A-212ENST00000541866 CAMSAP1Q5T5Y3 1602 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms