RNA–Protein interactions for RNA: ENST00000541097.5

LDHA-219, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-219ENST00000541097 CLIP1P30622 1438 aa11.01□□□□□ -0.65
LDHA-219ENST00000541097 EFCAB2Q5VUJ9 269 aa11□□□□□ -0.65
LDHA-219ENST00000541097 AKNAQ7Z591 1439 aa11□□□□□ -0.65
LDHA-219ENST00000541097 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.99□□□□□ -0.651e-17■■□□□ 13.5
LDHA-219ENST00000541097 TROQ12816 1431 aaPredicted RBP10.99□□□□□ -0.65
LDHA-219ENST00000541097 FANCAO15360 1455 aa10.97□□□□□ -0.65
LDHA-219ENST00000541097 HECW1Q76N89 1606 aa10.96□□□□□ -0.65
LDHA-219ENST00000541097 DENND4BO75064 1496 aaPredicted RBP10.96□□□□□ -0.65
LDHA-219ENST00000541097 LOC105371045A0A1W2PR82 267 aa10.96□□□□□ -0.65
LDHA-219ENST00000541097 ADGRL1O94910 1474 aa10.94□□□□□ -0.66
LDHA-219ENST00000541097 CCDC18Q5T9S5 1454 aa10.94□□□□□ -0.66
LDHA-219ENST00000541097 FYCO1Q9BQS8 1478 aa10.93□□□□□ -0.66
LDHA-219ENST00000541097 SCAPERQ9BY12 1400 aa10.93□□□□□ -0.66
LDHA-219ENST00000541097 MAGI2Q86UL8 1455 aa10.92□□□□□ -0.66
LDHA-219ENST00000541097 CEP162Q5TB80 1403 aa10.92□□□□□ -0.66
LDHA-219ENST00000541097 TTC37Q6PGP7 1564 aa10.91□□□□□ -0.66
LDHA-219ENST00000541097 AFAP1Q8N556 730 aa10.91□□□□□ -0.66
LDHA-219ENST00000541097 POGZQ7Z3K3 1410 aa10.89□□□□□ -0.67
LDHA-219ENST00000541097 FRMPD1Q5SYB0 1578 aa10.89□□□□□ -0.67
LDHA-219ENST00000541097 PCF11O94913 1555 aaKnown RBP10.87□□□□□ -0.67
LDHA-219ENST00000541097 ARID4BQ4LE39 1312 aaPredicted RBP10.86□□□□□ -0.67
LDHA-219ENST00000541097 YEATS2Q9ULM3 1422 aa10.86□□□□□ -0.67
LDHA-219ENST00000541097 ZMYM4Q5VZL5 1548 aa10.86□□□□□ -0.67
LDHA-219ENST00000541097 GPATCH8Q9UKJ3 1502 aaKnown RBP10.86□□□□□ -0.67
LDHA-219ENST00000541097 KIF14Q15058 1648 aa10.86□□□□□ -0.67
LDHA-219ENST00000541097 CFAP74Q9C0B2 1584 aa10.86□□□□□ -0.67
LDHA-219ENST00000541097 CFDP1Q9UEE9 299 aaPredicted RBP10.85□□□□□ -0.67
LDHA-219ENST00000541097 MTUS2Q5JR59 1369 aa10.85□□□□□ -0.67
LDHA-219ENST00000541097 ATP10AO60312 1499 aa10.85□□□□□ -0.67
LDHA-219ENST00000541097 ZNF518AQ6AHZ1 1483 aa10.85□□□□□ -0.67
LDHA-219ENST00000541097 ARHGAP5Q13017 1502 aa10.84□□□□□ -0.67
LDHA-219ENST00000541097 MLH3Q9UHC1 1453 aa10.83□□□□□ -0.68
LDHA-219ENST00000541097 KCNA4P22459 653 aa10.83□□□□□ -0.68
LDHA-219ENST00000541097 HNRNPMP52272 730 aaKnown RBP eCLIP10.83□□□□□ -0.68
LDHA-219ENST00000541097 RICTORQ6R327 1708 aa10.83□□□□□ -0.68
LDHA-219ENST00000541097 LRRIQ1Q96JM4 1722 aa10.83□□□□□ -0.68
LDHA-219ENST00000541097 ARHGEF12Q9NZN5 1544 aa10.83□□□□□ -0.68
LDHA-219ENST00000541097 KIAA1107Q9UPP5 1409 aa10.83□□□□□ -0.68
LDHA-219ENST00000541097 TRAPPC8Q9Y2L5 1435 aa10.83□□□□□ -0.68
LDHA-219ENST00000541097 CCNB3Q8WWL7 1395 aa10.82□□□□□ -0.68
LDHA-219ENST00000541097 PTPRMP28827 1452 aa10.81□□□□□ -0.68
LDHA-219ENST00000541097 ZFYVE16Q7Z3T8 1539 aa10.81□□□□□ -0.68
LDHA-219ENST00000541097 ARHGEF40Q8TER5 1519 aa10.81□□□□□ -0.68
LDHA-219ENST00000541097 ZNF777Q9ULD5 760 aaPredicted RBP10.81□□□□□ -0.68
LDHA-219ENST00000541097 U3KPZ7 1027 aaPredicted RBP10.81□□□□□ -0.68
LDHA-219ENST00000541097 VPS8Q8N3P4 1428 aa10.81□□□□□ -0.68
LDHA-219ENST00000541097 KDM5CP41229 1560 aa10.79□□□□□ -0.68
LDHA-219ENST00000541097 C9orf84Q5VXU9 1444 aa10.79□□□□□ -0.68
LDHA-219ENST00000541097 RSPH4AQ5TD94 716 aa10.79□□□□□ -0.68
LDHA-219ENST00000541097 ZNF644Q9H582 1327 aaPredicted RBP10.79□□□□□ -0.68
LDHA-219ENST00000541097 ADAMTSL3P82987 1691 aa10.79□□□□□ -0.68
LDHA-219ENST00000541097 MYO5CQ9NQX4 1742 aa10.78□□□□□ -0.68
LDHA-219ENST00000541097 MYT1LQ9UL68 1186 aa10.78□□□□□ -0.68
LDHA-219ENST00000541097 SPAG9O60271 1321 aaKnown RBP10.78□□□□□ -0.68
LDHA-219ENST00000541097 PLEKHH2Q8IVE3 1493 aa10.77□□□□□ -0.69
LDHA-219ENST00000541097 MLECQ14165 292 aa10.77□□□□□ -0.69
LDHA-219ENST00000541097 KANK4Q5T7N3 995 aaPredicted RBP10.77□□□□□ -0.69
LDHA-219ENST00000541097 CDC42BPBQ9Y5S2 1711 aa10.77□□□□□ -0.69
LDHA-219ENST00000541097 ABCC1P33527 1531 aa10.77□□□□□ -0.69
LDHA-219ENST00000541097 MBD5Q9P267 1494 aa10.76□□□□□ -0.69
LDHA-219ENST00000541097 MAP3K1Q13233 1512 aa10.76□□□□□ -0.69
LDHA-219ENST00000541097 PREX2Q70Z35 1606 aa10.76□□□□□ -0.69
LDHA-219ENST00000541097 BCORL1Q5H9F3 1711 aa10.75□□□□□ -0.69
LDHA-219ENST00000541097 LRRC9Q6ZRR7 1453 aa10.74□□□□□ -0.69
LDHA-219ENST00000541097 EHBP1L1Q8N3D4 1523 aa10.74□□□□□ -0.69
LDHA-219ENST00000541097 NCOA2Q15596 1464 aa10.74□□□□□ -0.69
LDHA-219ENST00000541097 AGLP35573 1532 aa10.74□□□□□ -0.69
LDHA-219ENST00000541097 REREQ9P2R6 1566 aa10.73□□□□□ -0.69
LDHA-219ENST00000541097 CAPN15O75808 1086 aa10.73□□□□□ -0.69
LDHA-219ENST00000541097 RTEL1-TNFRSF6BF6WH68 1400 aa10.73□□□□□ -0.69
LDHA-219ENST00000541097 SAMD9LQ8IVG5 1584 aa10.73□□□□□ -0.69
LDHA-219ENST00000541097 CEBPAP49715 358 aaPredicted RBP10.71□□□□□ -0.69
LDHA-219ENST00000541097 TIAM1Q13009 1591 aa10.71□□□□□ -0.69
LDHA-219ENST00000541097 CDC42BPAQ5VT25 1732 aa10.71□□□□□ -0.69
LDHA-219ENST00000541097 HECW2Q9P2P5 1572 aa10.71□□□□□ -0.69
LDHA-219ENST00000541097 DIP2CQ9Y2E4 1556 aa10.71□□□□□ -0.69
LDHA-219ENST00000541097 SIGLEC1Q9BZZ2 1709 aa10.7□□□□□ -0.7
LDHA-219ENST00000541097 SYCP2Q9BX26 1530 aa10.7□□□□□ -0.7
LDHA-219ENST00000541097 APLP2Q06481 763 aa10.7□□□□□ -0.7
LDHA-219ENST00000541097 MADDQ8WXG6 1647 aa10.69□□□□□ -0.7
LDHA-219ENST00000541097 DHX29Q7Z478 1369 aaKnown RBP10.69□□□□□ -0.7
LDHA-219ENST00000541097 TSPY4P0CV99 314 aa10.69□□□□□ -0.7
LDHA-219ENST00000541097 TSPY10P0CW01 314 aa10.69□□□□□ -0.7
LDHA-219ENST00000541097 MIA2Q96PC5 1412 aa10.68□□□□□ -0.7
LDHA-219ENST00000541097 ESF1Q9H501 851 aaKnown RBP10.68□□□□□ -0.7
LDHA-219ENST00000541097 A2MP01023 1474 aa10.68□□□□□ -0.7
LDHA-219ENST00000541097 LMTK3Q96Q04 1460 aa10.68□□□□□ -0.7
LDHA-219ENST00000541097 KIDINS220Q9ULH0 1771 aa10.67□□□□□ -0.7
LDHA-219ENST00000541097 ITSN2Q9NZM3 1697 aa10.67□□□□□ -0.7
LDHA-219ENST00000541097 SPINK5Q9NQ38 1064 aaPredicted RBP10.67□□□□□ -0.7
LDHA-219ENST00000541097 CNTLNQ9NXG0 1405 aa10.67□□□□□ -0.7
LDHA-219ENST00000541097 ZMYM3Q14202 1370 aa10.66□□□□□ -0.7
LDHA-219ENST00000541097 ABCA6Q8N139 1617 aa10.66□□□□□ -0.7
LDHA-219ENST00000541097 MYOM3Q5VTT5 1437 aa10.66□□□□□ -0.7
LDHA-219ENST00000541097 ATP7AQ04656 1500 aa10.65□□□□□ -0.7
LDHA-219ENST00000541097 HSPA2P54652 639 aa10.65□□□□□ -0.7
LDHA-219ENST00000541097 GGT6Q6P531 493 aa10.65□□□□□ -0.7
LDHA-219ENST00000541097 CCDC141Q6ZP82 1450 aa10.65□□□□□ -0.7
LDHA-219ENST00000541097 CAMSAP2Q08AD1 1489 aa10.64□□□□□ -0.71
LDHA-219ENST00000541097 SUPT6HQ7KZ85 1726 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms